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Ancient gene linkages support ctenophores as sister to other animals
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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A mesopelagic ctenophore representing a new family, with notes on family-level taxonomy in Ctenophora: Vampyroctena delmarvensis gen. nov. sp. nov. (Vampyroctenidae, fam. nov.)
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SINEs: Short interspersed repeated elements of the eukaryotic genome
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Phylogenomics Revives Traditional Views on Deep Animal Relationships
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A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals
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Neuropeptide repertoire and 3D anatomy of the ctenophore nervous system
inferredcites →https://doi.org/10.1016/j.tig.2011.03.004openalex-snapshot
Interpretation of karyotype evolution should consider chromosome structural constraints
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The hidden biology of sponges and ctenophores
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Rare genomic changes as a tool for phylogenetics
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The Closest Unicellular Relatives of Animals
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Initial sequencing and analysis of the human genome
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The ctenophore genome and the evolutionary origins of neural systems
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inferredcites →https://doi.org/10.1038/s41559-017-0331-3openalex-snapshot
Ctenophore relationships and their placement as the sister group to all other animals
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Gene gain and loss across the metazoan tree of life
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inferredcites →https://doi.org/10.1038/s41592-021-01101-xopenalex-snapshot
Sensitive protein alignments at tree-of-life scale using DIAMOND
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Error, signal, and the placement of Ctenophora sister to all other animals
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The Phylogeny of the Lower MetazoaThe Evolution of the Metazoa.Jovan Hadzi
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Formation of the Statolith in the Ctenophore Mnemiopsis leidyi
inferredcites →https://doi.org/10.1093/bioinformatics/btad014openalex-snapshot
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STAR: ultrafast universal RNA-seq aligner
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BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
inferredcites →https://doi.org/10.1093/bioinformatics/bty191openalex-snapshot
Minimap2: pairwise alignment for nucleotide sequences
inferredcites →https://doi.org/10.1093/bioinformatics/btz540openalex-snapshot
Cooler: scalable storage for Hi-C data and other genomically labeled arrays
inferredcites →https://doi.org/10.1093/g3journal/jkab302openalex-snapshot
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inferredcites →https://doi.org/10.1093/gigascience/giaa036openalex-snapshot
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inferredcites →https://doi.org/10.1093/gigascience/giaa037openalex-snapshot
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inferredcites →https://doi.org/10.1093/gigascience/giaa094openalex-snapshot
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inferredcites →https://doi.org/10.1093/molbev/msab170openalex-snapshot
Rooting the Animal Tree of Life
inferredcites →https://doi.org/10.1093/molbev/msr185openalex-snapshot
Phylogenetic Relationships within the Opisthokonta Based on Phylogenomic Analyses of Conserved Single-Copy Protein Domains
inferredcites →https://doi.org/10.1093/molbev/msy171openalex-snapshot
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inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
inferredcites →https://doi.org/10.1093/nar/gkaa450openalex-snapshot
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inferredcites →https://doi.org/10.1093/nar/gkf436openalex-snapshot
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
inferredcites →https://doi.org/10.1093/nar/gkz1115openalex-snapshot
Targeted delivery and enhanced gene-silencing activity of centrally modified folic acid–siRNA conjugates
inferredcites →https://doi.org/10.1093/nargab/lqaa026openalex-snapshot
GeneMark-EP+: eukaryotic gene prediction with self-training in the space of genes and proteins
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1093/sysbio/syw021openalex-snapshot
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
inferredcites →https://doi.org/10.1098/rspb.2019.0831openalex-snapshot
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inferredcites →https://doi.org/10.1098/rstb.2015.0059openalex-snapshot
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inferredcites →https://doi.org/10.1101/2022.07.26.501511openalex-snapshot
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inferredcites →https://doi.org/10.1101/254797openalex-snapshot
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inferredcites →https://doi.org/10.1101/gr.193474.115openalex-snapshot
Chromosome-scale shotgun assembly using an in vitro method for long-range linkage
inferredcites →https://doi.org/10.1111/brv.12090openalex-snapshot
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inferredcites →https://doi.org/10.1111/dgd.12587openalex-snapshot
Revision of the Capsaspora genome using read mating information adjusts the view on premetazoan genome
inferredcites →https://doi.org/10.1126/sciadv.abi5884openalex-snapshot
Deeply conserved synteny and the evolution of metazoan chromosomes
inferredcites →https://doi.org/10.1126/science.1242592openalex-snapshot
The Genome of the Ctenophore Mnemiopsis leidyi and Its Implications for Cell Type Evolution
inferredcites →https://doi.org/10.1126/science.abj2949openalex-snapshot
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inferredcites →https://doi.org/10.1146/annurev.ge.05.120171.000501openalex-snapshot
THE MAPPING OF HUMAN CHROMOSOMES
inferredcites →https://doi.org/10.1186/1471-2105-12-s9-s11openalex-snapshot
Constraints on genes shape long-term conservation of macro-synteny in metazoan genomes
inferredcites →https://doi.org/10.1186/1741-7007-4-41openalex-snapshot
Composition-based statistics and translated nucleotide searches: Improving the TBLASTN module of BLAST
inferredcites →https://doi.org/10.1186/2041-9139-1-9openalex-snapshot
The homeodomain complement of the ctenophore Mnemiopsis leidyi suggests that Ctenophora and Porifera diverged prior to the ParaHoxozoa
inferredcites →https://doi.org/10.1186/2041-9139-6-1openalex-snapshot
The phylogenetic position of ctenophores and the origin(s) of nervous systems
inferredcites →https://doi.org/10.1186/gb-2011-12-5-r45openalex-snapshot
A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi
inferredcites →https://doi.org/10.1186/gb-2013-14-2-r15openalex-snapshot
Premetazoan genome evolution and the regulation of cell differentiation in the choanoflagellate Salpingoeca rosetta
inferredcites →https://doi.org/10.1186/s12859-018-2485-7openalex-snapshot
Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies
inferredcites →https://doi.org/10.1186/s12862-018-1230-1openalex-snapshot
Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model
inferredcites →https://doi.org/10.1186/s12864-017-3879-zopenalex-snapshot
Scaffolding of long read assemblies using long range contact information
inferredcites →https://doi.org/10.1186/s12864-018-4715-9openalex-snapshot
New genomic data and analyses challenge the traditional vision of animal epithelium evolution
inferredcites →https://doi.org/10.1186/s12915-023-01619-wopenalex-snapshot
The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes
inferredcites →https://doi.org/10.1186/s13059-015-0721-2openalex-snapshot
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inferredcites →https://doi.org/10.1186/s13059-018-1486-1openalex-snapshot
HiGlass: web-based visual exploration and analysis of genome interaction maps
inferredcites →https://doi.org/10.1186/s13059-019-1832-yopenalex-snapshot
OrthoFinder: phylogenetic orthology inference for comparative genomics
inferredcites →https://doi.org/10.1242/jeb.110817openalex-snapshot
Elements of a ‘nervous system’ in sponges
inferredcites →https://doi.org/10.1242/jeb.111872openalex-snapshot
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inferredcites →https://doi.org/10.12688/f1000research.12232.1openalex-snapshot
BlobTools: Interrogation of genome assemblies
inferredcites →https://doi.org/10.12688/wellcomeopenres.17222.1openalex-snapshot
The Aquatic Symbiosis Genomics Project: probing the evolution of symbiosis across the tree of life
inferredcites →https://doi.org/10.1371/journal.pcbi.1012164openalex-snapshot
Pairtools: From sequencing data to chromosome contacts
inferredcites →https://doi.org/10.1371/journal.pone.0029233openalex-snapshot
A New Stalked Filter-Feeder from the Middle Cambrian Burgess Shale, British Columbia, Canada
inferredcites →https://doi.org/10.1371/journal.pone.0112963openalex-snapshot
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inferredcites →https://doi.org/10.1371/journal.pone.0128742openalex-snapshot
Occurrence of Isopenicillin-N-Synthase Homologs in Bioluminescent Ctenophores and Implications for Coelenterazine Biosynthesis
inferredcites →https://doi.org/10.1534/g3.119.400951openalex-snapshot
A Screen for Gene Paralogies Delineating Evolutionary Branching Order of Early Metazoa
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Multiple Origins of Neurons From Secretory Cells
inferredcites →https://doi.org/10.3389/fgene.2022.970314openalex-snapshot
Speciation of pelagic zooplankton: Invisible boundaries can drive isolation of oceanic ctenophores
inferredcites →https://doi.org/10.3389/fmars.2020.576476openalex-snapshot
Bioluminescence in an Undescribed Species of Carnivorous Sponge (Cladorhizidae) From the Deep Sea
inferredcites →https://doi.org/10.7554/elife.08904openalex-snapshot
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inferredcites →https://doi.org/10.7717/peerj.4958openalex-snapshot
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inferredcites →https://doi.org/10.7717/peerj.8865openalex-snapshot
Very few sites can reshape the inferred phylogenetic tree
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Ctenophora: Illustrated Guide and Taxonomy
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inferred← citeshttps://doi.org/10.1007/978-1-0716-3642-8_7openalex-snapshot
DNA Isolation Long-Read Genomic Sequencing in Ctenophores
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A Guide to Phylogenomic Inference
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inferred← citeshttps://doi.org/10.1016/j.envres.2024.119708openalex-snapshot
Toxicity of rare earth elements (REEs) to marine organisms: Using species sensitivity distributions to establish water quality guidelines for protecting marine life
inferred← citeshttps://doi.org/10.1016/j.gloplacha.2025.104980openalex-snapshot
Editorial preface to special issue: Life and environments in transition: The Neoproterozoic-early Paleozoic world
inferred← citeshttps://doi.org/10.1016/j.heliyon.2025.e42542openalex-snapshot
Reproductive success of inbred strain MV31 of the ctenophore Mnemiopsis leidyi in a self-sustaining inland laboratory culture system
inferred← citeshttps://doi.org/10.1016/j.isci.2023.108579openalex-snapshot
Tracing the evolution of tissue inhibitor of metalloproteinases in Metazoa with the Pteria penguin genome
inferred← citeshttps://doi.org/10.1016/j.isci.2025.113832openalex-snapshot
Giant genome of the vampire squid reveals the derived state of modern octopod karyotypes
inferred← citeshttps://doi.org/10.1016/j.isci.2025.114616openalex-snapshot
Ancient gene linkages and ultraconserved elements disentangle Acari interrelationships
inferred← citeshttps://doi.org/10.1016/j.matbio.2025.04.004openalex-snapshot
The life cycle of type IV collagen
inferred← citeshttps://doi.org/10.1016/j.mce.2024.112324openalex-snapshot
Neuropeptides and receptors in the cephalochordate: A crucial model for understanding the origin and evolution of vertebrate neuropeptide systems
inferred← citeshttps://doi.org/10.1016/j.oceaneng.2026.127379openalex-snapshot
Hydrodynamic mechanisms and performance optimization of biomimetic jellyfish jet propulsion under asymmetric kinematics
inferred← citeshttps://doi.org/10.1016/j.palaeo.2024.112301openalex-snapshot
Adaptations to changing substrates in diploblastic dinomischids from the early Cambrian
inferred← citeshttps://doi.org/10.1016/j.palwor.2025.200995openalex-snapshot
The earliest sponge spicule tufts from the Cambrian Lower Yanjiahe Formation, Three Gorges area, South China
inferred← citeshttps://doi.org/10.1016/j.plipres.2025.101355openalex-snapshot
Homeocurvature: A new dimension of membrane adaptation to extreme environments
inferred← citeshttps://doi.org/10.1016/j.semcdb.2025.103645openalex-snapshot
Mechanical mechanisms of morphogenesis as potential substrates for evolutionary change
inferred← citeshttps://doi.org/10.1016/j.semcdb.2026.103670openalex-snapshot
Epithelial cell plasticity in metazoans: Evolutionary insights into roles and mechanisms
inferred← citeshttps://doi.org/10.1016/j.tibs.2024.04.005openalex-snapshot
Assembling a Hippo: the evolutionary emergence of an animal developmental signaling pathway
inferred← citeshttps://doi.org/10.1016/j.tics.2025.08.009openalex-snapshot
Can only meat machines be conscious?
inferred← citeshttps://doi.org/10.1016/j.tins.2024.12.008openalex-snapshot
Making sense of vertebrate senses from a neural crest and cranial placode evo-devo perspective
inferred← citeshttps://doi.org/10.1016/j.watbs.2026.100681openalex-snapshot
The haplotype-resolved complete Tetraodon nigroviridis genome provides insights into the evolution of the most compact vertebrate genome
inferred← citeshttps://doi.org/10.1016/j.xgen.2025.100761openalex-snapshot
Chromosome-scale genome assembly reveals how repeat elements shape non-coding RNA landscapes active during newt limb regeneration
inferred← citeshttps://doi.org/10.1016/j.xgen.2025.100920openalex-snapshot
A rare, evolutionarily conserved venom protein benefits endoparasitism across parasitoids
inferred← citeshttps://doi.org/10.1016/j.xgen.2026.101336openalex-snapshot
Single-library chromosome-scale diploid assemblies of vole genomes resolve a species-specific duplication implicated in pair bonding
inferred← citeshttps://doi.org/10.1016/j.ydbio.2025.05.023openalex-snapshot
Aguinaldo et al. (1997) and the birth of Evo/Devo
inferred← citeshttps://doi.org/10.1016/j.ygcen.2025.114850openalex-snapshot
Peptide and neuropeptide diversity and function in bivalves
inferred← citeshttps://doi.org/10.1016/j.ygeno.2025.110990openalex-snapshot
Tissue-specific expression, functional analysis, and polymorphism of the KRT2 gene in sheep horn
inferred← citeshttps://doi.org/10.1016/j.ygeno.2025.111133openalex-snapshot
Expression profiling, functional characterization, and potential functional variants of the COL7A1 gene in sheep horn development
inferred← citeshttps://doi.org/10.1016/j.ympev.2023.107924openalex-snapshot
Genome-scale approach to reconstructing the phylogenetic tree of psyllids (superfamily Psylloidea) with account of systematic bias
inferred← citeshttps://doi.org/10.1016/j.ympev.2024.108197openalex-snapshot
Reticulate evolution: Detection and utility in the phylogenomics era
inferred← citeshttps://doi.org/10.1016/j.ympev.2024.108246openalex-snapshot
Gondwanan relic or recent arrival? The biogeographic origins and systematics of Australian tarantulas
inferred← citeshttps://doi.org/10.1016/j.ympev.2025.108380openalex-snapshot
Exploring Genome Architecture as a Source of Phylogenetic Characters for Resolving the Apulmonate Arachnid Polytomy
inferred← citeshttps://doi.org/10.1017/s0140525x25103567openalex-snapshot
A speculative argument against consciousness in AI (and perhaps some invertebrates)
inferred← citeshttps://doi.org/10.1021/acsami.5c08585openalex-snapshot
Recyclable Ctenophore-Inspired Field-Coupling Microspheres for Precise Detection of Microscopic Defects and Electric Field Distortions in Dielectric Materials
inferred← citeshttps://doi.org/10.1038/d41586-026-00238-zopenalex-snapshot
What were the first animals? The fierce sponge–jelly battle that just won’t end
inferred← citeshttps://doi.org/10.1038/d41586-026-02040-3openalex-snapshot
Body-plan organizer in comb jellies hints at animal ancestry
inferred← citeshttps://doi.org/10.1038/s41467-024-46807-6openalex-snapshot
Extracellular DNA traps in a ctenophore demonstrate immune cell behaviors in a non-bilaterian
inferred← citeshttps://doi.org/10.1038/s41467-024-49848-zopenalex-snapshot
Genomic and single-cell analyses reveal genetic signatures of swimming pattern and diapause strategy in jellyfish
inferred← citeshttps://doi.org/10.1038/s41467-024-52380-9openalex-snapshot
A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence
inferred← citeshttps://doi.org/10.1038/s41467-024-52464-6openalex-snapshot
Decoupling of strain- and intrastrain-level interactions of microbiomes in a sponge holobiont
inferred← citeshttps://doi.org/10.1038/s41467-024-52941-yopenalex-snapshot
Coordinated cellular behavior regulated by epinephrine neurotransmitters in the nerveless placozoa
inferred← citeshttps://doi.org/10.1038/s41467-025-56115-2openalex-snapshot
Structural, molecular and developmental evidence for cell-type diversity in cnidarian mechanosensory neurons
inferred← citeshttps://doi.org/10.1038/s41467-025-64570-0openalex-snapshot
Chromatin profiling identifies putative dual roles for H3K27me3 in regulating cell type-specific genes and transposable elements in choanoflagellates
inferred← citeshttps://doi.org/10.1038/s41467-026-77625-7openalex-snapshot
Genome reorganisation and expansion shape 3D genome architecture and define a distinct regulatory landscape in coleoid cephalopods
inferred← citeshttps://doi.org/10.1038/s41559-025-02728-1openalex-snapshot
An episodic burst of massive genomic rearrangements and the origin of non-marine annelids
inferred← citeshttps://doi.org/10.1038/s41559-025-02866-6openalex-snapshot
Molecular evidence from xenacoelomorph gonopore formation supports homology with the bilaterian anus
inferred← citeshttps://doi.org/10.1038/s41576-023-00620-xopenalex-snapshot
Incongruence in the phylogenomics era
inferred← citeshttps://doi.org/10.1038/s41576-024-00699-wopenalex-snapshot
The origin and evolution of Wnt signalling
inferred← citeshttps://doi.org/10.1038/s41583-025-00983-6openalex-snapshot
The evolutionary origins of synaptic proteins and their changing roles in different organisms across evolution
inferred← citeshttps://doi.org/10.1038/s41586-025-08960-wopenalex-snapshot
Chromatin loops are an ancestral hallmark of the animal regulatory genome
inferred← citeshttps://doi.org/10.1038/s41586-025-10092-0openalex-snapshot
Ancient co-option of LTR retrotransposons as yeast centromeres
inferred← citeshttps://doi.org/10.1038/s41586-026-10643-zopenalex-snapshot
A blastoporal organizer in a ctenophore
inferred← citeshttps://doi.org/10.1038/s41594-025-01649-8openalex-snapshot
Structural phylogenetics unravels the evolutionary diversification of communication systems in gram-positive bacteria and their viruses
inferred← citeshttps://doi.org/10.1038/s41597-025-05101-wopenalex-snapshot
Chromosome-level genome assembly of the doctor fish (Garra rufa)
inferred← citeshttps://doi.org/10.1038/s41597-025-05341-wopenalex-snapshot
Chromosome-level genome assembly and annotation of the maize weevil (Sitophilus zeamais Motschulsky)
inferred← citeshttps://doi.org/10.1038/s41597-025-06258-0openalex-snapshot
Chromosome-level genome assembly of the white-spotted sawyer Monochamus scutellatus (Coleoptera: Cerambycidae)
inferred← citeshttps://doi.org/10.1038/s41597-025-06507-2openalex-snapshot
Chromosome-scale genome and lncRNA annotation of the Orange Baboon Tarantula (Pterinochilus murinus)
inferred← citeshttps://doi.org/10.1038/s41597-026-06755-wopenalex-snapshot
Chromosome-level genome assembly of the deep-sea solemyid bivalve Acharax haimaensis
inferred← citeshttps://doi.org/10.1038/s41597-026-07126-1openalex-snapshot
An annotated genome of freshwater amphipod (Gammarus nekkensis)
inferred← citeshttps://doi.org/10.1038/s41597-026-07161-yopenalex-snapshot
Chromosome-level genome assembly of the sponge Halisarca dujardinii
inferred← citeshttps://doi.org/10.1038/s41598-025-28962-yopenalex-snapshot
First draft genome assembly of sponge Halisarca dujardinii reveals key components of basement membrane and broad repertoire of aggregation factors
inferred← citeshttps://doi.org/10.1038/s41598-025-91048-2openalex-snapshot
Piezo proteins, mechano reception and behaviour in Hydra
inferred← citeshttps://doi.org/10.1038/s42003-023-05312-0openalex-snapshot
Function and phylogeny support the independent evolution of an ASIC-like Deg/ENaC channel in the Placozoa
inferred← citeshttps://doi.org/10.1038/s42003-024-05901-7openalex-snapshot
The ctenophore Mnemiopsis leidyi deploys a rapid injury response dating back to the last common animal ancestor
inferred← citeshttps://doi.org/10.1038/s42003-024-06458-1openalex-snapshot
Actomyosin organelle functions of SPIRE actin nucleators precede animal evolution
inferred← citeshttps://doi.org/10.1038/s42003-025-07849-8openalex-snapshot
Ant phylogeny is not resolved by the application of site heterogeneous models
inferred← citeshttps://doi.org/10.1038/s42003-025-09368-yopenalex-snapshot
Evolutionary dynamics of FoxQ2 transcription factors across metazoans reveals three ancient paralogs
inferred← citeshttps://doi.org/10.1038/s42003-025-09409-6openalex-snapshot
An ancient lysozyme in placozoans participates in acidic extracellular digestion
inferred← citeshttps://doi.org/10.1073/pnas.2311872120openalex-snapshot
A predatory gastrula leads to symbiosis-independent settlement in Aiptasia
inferred← citeshttps://doi.org/10.1073/pnas.2313921121openalex-snapshot
Subgenome-aware analyses reveal the genomic consequences of ancient allopolyploid hybridizations throughout the cotton family
inferred← citeshttps://doi.org/10.1073/pnas.2407461121openalex-snapshot
A broad survey of choanoflagellates revises the evolutionary history of the Shaker family of voltage-gated K + channels in animals
inferred← citeshttps://doi.org/10.1073/pnas.2409125121openalex-snapshot
Proteomic analysis of the sponge Aggregation Factor implicates an ancient toolkit for allorecognition and adhesion in animals
inferred← citeshttps://doi.org/10.1073/pnas.2411499121openalex-snapshot
Reverse development in the ctenophore Mnemiopsis leidyi
inferred← citeshttps://doi.org/10.1073/pnas.2521280123openalex-snapshot
Insights into cephalochordate genome and gene evolution from the early-diverging amphioxus Asymmetron lucayanum
inferred← citeshttps://doi.org/10.1080/14772019.2025.2545834openalex-snapshot
The oldest diverse jellyfish fauna reinterpreted as sessile polypoid dinomischids (stem-group Ctenophora)
inferred← citeshttps://doi.org/10.1080/15548627.2024.2307215openalex-snapshot
Did mitophagy follow the origin of mitochondria?
inferred← citeshttps://doi.org/10.1083/jcb.202411175openalex-snapshot
Evolutionarily diverse caveolins share a common structural framework built around amphipathic disks
inferred← citeshttps://doi.org/10.1085/jgp.202413636openalex-snapshot
NALCN/Cch1 channelosome subunits originated in early eukaryotes
inferred← citeshttps://doi.org/10.1085/jgp.202413740openalex-snapshot
Ctenophores and parahoxozoans independently evolved functionally diverse voltage-gated K+ channels
inferred← citeshttps://doi.org/10.1091/mbc.e24-12-0585openalex-snapshot
Did axons evolve by activating cytokinesis during interphase? A hypothesis on the origin of neurons
inferred← citeshttps://doi.org/10.1093/9780197831533.001.0001openalex-snapshot
Adaptationist Evo-Devo
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0003openalex-snapshot
Developmental potential and adaptation
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0004openalex-snapshot
Evolution and developmental systems
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0005openalex-snapshot
Understanding phenotypic plasticity and its role in evolution
inferred← citeshttps://doi.org/10.1093/9780197831533.003.0006openalex-snapshot
Building adaptationist evo-devo explanations of organismal form
inferred← citeshttps://doi.org/10.1093/bfgp/elad029openalex-snapshot
Spiralian genomics and the evolution of animal genome architecture
inferred← citeshttps://doi.org/10.1093/bfgp/elad043openalex-snapshot
Emerging questions on the mechanisms and dynamics of 3D genome evolution in spiralians
inferred← citeshttps://doi.org/10.1093/chemse/bjae009openalex-snapshot
What are olfaction and gustation, and do all animals have them?
inferred← citeshttps://doi.org/10.1093/dnares/dsaf022openalex-snapshot
Chromosome-scale genome assembly of Sauvagesia rhodoleuca (Ochnaceae) provides insights into its genome evolution and demographic history
inferred← citeshttps://doi.org/10.1093/g3journal/jkad192openalex-snapshot
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)
inferred← citeshttps://doi.org/10.1093/g3journal/jkaf011openalex-snapshot
De novo genome assembly of the Edwardsiid anthozoan Edwardsia elegans
inferred← citeshttps://doi.org/10.1093/g3journal/jkaf110openalex-snapshot
Genome assembly of Bougainvillia cf. muscus (Cnidaria: Hydrozoa)
inferred← citeshttps://doi.org/10.1093/g3journal/jkaf233openalex-snapshot
Chromosome-level haplotype-resolved genome assembly of the linguliform brachiopod Discradisca antillarum (d'Orbigny, 1845)
inferred← citeshttps://doi.org/10.1093/gbe/evae226openalex-snapshot
Chromosome Structural Rearrangements in Invasive Haplodiploid Ambrosia Beetles Revealed by the Genomes of Euwallacea fornicatus (Eichhoff) and Euwallacea similis (Ferrari) (Coleoptera, Curculionidae, Scolytinae)
inferred← citeshttps://doi.org/10.1093/gbe/evae231openalex-snapshot
LukProt: A Database of Eukaryotic Predicted Proteins Designed for Investigations of Animal Origins
inferred← citeshttps://doi.org/10.1093/gbe/evae254openalex-snapshot
Multiple Displacement Amplification Facilitates SMRT Sequencing of Microscopic Animals and the Genome of the Gastrotrich Lepidodermella squamata (Dujardin 1841)
inferred← citeshttps://doi.org/10.1093/gbe/evaf006openalex-snapshot
The Chromosome-level Genome of the Ctenophore Mnemiopsis leidyi A. Agassiz, 1865 Reveals a Unique Immune Gene Repertoire
inferred← citeshttps://doi.org/10.1093/gbe/evaf028openalex-snapshot
Horizontal Transfer of msp130 Genes and the Evolution of Metazoan Biocalcification
inferred← citeshttps://doi.org/10.1093/gbe/evaf166openalex-snapshot
Variation in Genome Architecture and Epigenetic Modification Across the Microsporidia Phylogeny
inferred← citeshttps://doi.org/10.1093/gbe/evaf193openalex-snapshot
Covering All Bases: A Universal Metazoan UCE Probe Set to Democratize Phylogenomics
inferred← citeshttps://doi.org/10.1093/gbe/evag041openalex-snapshot
A Chromosome-level Assembly and Functional Genomic Resources for the Model Annelid Capitella teleta
inferred← citeshttps://doi.org/10.1093/gbe/evag064openalex-snapshot
Chromosome-Scale Reference Genome Assemblies for Two Anoplophora Longhorned Beetle Species (Coleoptera: Cerambycidae)
inferred← citeshttps://doi.org/10.1093/gbe/evag081openalex-snapshot
Big Spider, Big Genome: Chromosome-Level Genome of a North American Tarantula ( Aphonopelma marxi ) and Comparative Genomics Across 300 Million Years of Spider Evolution
inferred← citeshttps://doi.org/10.1093/gbe/evag218openalex-snapshot
Comparative Genomics Reveals Signatures of Distinct Metabolic Strategies and Gene Loss Associated With Hydra Immortality
inferred← citeshttps://doi.org/10.1093/gigascience/giaf097openalex-snapshot
First chromosome-level genome assembly of the colonial chordate model Botryllus schlosseri (Tunicata)
inferred← citeshttps://doi.org/10.1093/gigascience/giaf105openalex-snapshot
Haplotype-resolved reference genomes of the sea turtle clade unveil ultra-syntenic genomes with hotspots of divergence
inferred← citeshttps://doi.org/10.1093/glycob/cwae090openalex-snapshot
The diversity of glycan chains in jellyfish mucin of three Cubozoan species: the contrast in molecular evolution rates of the peptide chain and Glycans
inferred← citeshttps://doi.org/10.1093/ismeco/ycag039openalex-snapshot
Intracellular vesicle-mediated biomineralization of arsenic and barium by a sponge symbiotic bacterium
inferred← citeshttps://doi.org/10.1093/ismejo/wrae069openalex-snapshot
Co-occurring nitrifying symbiont lineages are vertically inherited and widespread in marine sponges
inferred← citeshttps://doi.org/10.1093/jhered/esae074openalex-snapshot
A chromosome-level genome of the giant vinegaroon Mastigoproctus giganteus exhibits the signature of pre-Silurian whole genome duplication
inferred← citeshttps://doi.org/10.1093/molbev/msad175openalex-snapshot
Major Revisions in Pancrustacean Phylogeny and Evidence of Sensitivity to Taxon Sampling
inferred← citeshttps://doi.org/10.1093/molbev/msae172openalex-snapshot
Annelid Comparative Genomics and the Evolution of Massive Lineage-Specific Genome Rearrangement in Bilaterians
inferred← citeshttps://doi.org/10.1093/molbev/msae254openalex-snapshot
The Rich Evolutionary History of the Reactive Oxygen Species Metabolic Arsenal Shapes Its Mechanistic Plasticity at the Onset of Metazoan Regeneration
inferred← citeshttps://doi.org/10.1093/molbev/msaf015openalex-snapshot
Deciphering Plant NLR Genomic Evolution: Synteny-Informed Classification Unveils Insights into TNL Gene Loss
inferred← citeshttps://doi.org/10.1093/molbev/msaf321openalex-snapshot
Sponges, ctenophores, and the statistical significance of syntenies
inferred← citeshttps://doi.org/10.1093/molbev/msag043openalex-snapshot
Toward a genomic understanding of the tree of life
inferred← citeshttps://doi.org/10.1093/molbev/msag078openalex-snapshot
Evolutionary trajectories, early diversification, and species-specific amplification of the metazoan inhibitor of apoptosis (IAP) repertoire
inferred← citeshttps://doi.org/10.1093/molbev/msag090openalex-snapshot
Phylogenomic mixture models outperform homogeneous and partitioned models
inferred← citeshttps://doi.org/10.1093/molbev/msag123openalex-snapshot
Evidence for an early cadherin–catenin interaction network in ctenophores
inferred← citeshttps://doi.org/10.1093/molbev/msag185openalex-snapshot
Reconstructing the evolutionary origin of β-catenin recognition in the Wnt destruction complex
inferred← citeshttps://doi.org/10.1093/nargab/lqae072openalex-snapshot
Morphological and dietary changes encoded in the genome of Beroe ovata, a ctenophore-eating ctenophore
inferred← citeshttps://doi.org/10.1093/plphys/kiaf072openalex-snapshot
S-RNase evolution in self-incompatibility: Phylogenomic insights into synteny with Class I T2 RNase genes
inferred← citeshttps://doi.org/10.1093/sysbio/syae018openalex-snapshot
Phylogenomic Discordance is Driven by Wide-Spread Introgression and Incomplete Lineage Sorting During Rapid Species Diversification Within Rattlesnakes (Viperidae: Crotalus and Sistrurus )
inferred← citeshttps://doi.org/10.1093/sysbio/syaf077openalex-snapshot
Whole Genomes Illuminate the Drivers of Gene Tree Discordance and the Tempo of Tinamou Diversification (Aves: Tinamidae)
inferred← citeshttps://doi.org/10.1093/sysbio/syag068openalex-snapshot
Microsynteny Analysis Clarifies the Early Diversification of Cypriniform Fishes
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlae098openalex-snapshot
Discordance between mitochondrial, nuclear, and symbiont genomes in aphid phylogenetics: who is telling the truth?
inferred← citeshttps://doi.org/10.1098/rsbl.2025.0250openalex-snapshot
Animal–chlorophyte photosymbioses: evolutionary origins and ecological diversity
inferred← citeshttps://doi.org/10.1098/rspb.2023.2626openalex-snapshot
Evolution of bioluminescence in Anthozoa with emphasis on Octocorallia
inferred← citeshttps://doi.org/10.1098/rspb.2024.0329openalex-snapshot
Acoelomorph flatworm monophyly is a long-branch attraction artefact obscuring a clade of Acoela and Xenoturbellida
inferred← citeshttps://doi.org/10.1098/rspb.2024.3093openalex-snapshot
Ancient divergent evolution of specialized swimming modes in aquatic beetles
inferred← citeshttps://doi.org/10.1101/2020.06.09.141010openalex-snapshot
Extracellular DNA traps in a ctenophore demonstrate conserved immune cell behaviors in a non-bilaterian
inferred← citeshttps://doi.org/10.1101/2022.11.15.516482openalex-snapshot
Evolutionarily diverse caveolins share a common structural framework built around amphipathic discs
inferred← citeshttps://doi.org/10.1101/2023.05.26.542442openalex-snapshot
A predatory gastrula leads to symbiosis-independent settlement in Aiptasia
inferred← citeshttps://doi.org/10.1101/2023.07.05.547804openalex-snapshot
Cross-species analysis of ARPP19 phosphorylation during oocyte meiotic maturation charts the emergence of a new cAMP-dependent role in vertebrates
inferred← citeshttps://doi.org/10.1101/2023.07.10.548381openalex-snapshot
Bursts of novel composite gene families at major nodes in animal evolution
inferred← citeshttps://doi.org/10.1101/2023.07.25.550562openalex-snapshot
The Hippo kinase cascade regulates a contractile cell behavior and cell density in a close unicellular relative of animals
inferred← citeshttps://doi.org/10.1101/2023.08.23.554511openalex-snapshot
Characterization of the mitochondrial proteome in the ctenophore Mnemiopsis leidyi using MitoPredictor
inferred← citeshttps://doi.org/10.1101/2023.09.17.558111openalex-snapshot
Inferring inter-chromosomal rearrangements and ancestral linkage groups from synteny
inferred← citeshttps://doi.org/10.1101/2023.09.20.556338openalex-snapshot
A genome-scale Opisthokonta tree of life: toward phylogenomic resolution of ancient divergences
inferred← citeshttps://doi.org/10.1101/2023.09.20.558635openalex-snapshot
Dissecting Factors Underlying Phylogenetic Uncertainty Using Machine Learning Models
inferred← citeshttps://doi.org/10.1101/2023.10.30.564672openalex-snapshot
Interactive visualization of whole eukaryote genome alignments using NCBI’s Comparative Genome Viewer (CGV)
inferred← citeshttps://doi.org/10.1101/2023.12.23.573102openalex-snapshot
Novel nitrifying symbiont lineages are vertically inherited and widespread in marine sponges
inferred← citeshttps://doi.org/10.1101/2024.02.06.578935openalex-snapshot
First draft genome assembly and characterization of sponge Halisarca dujardinii reveals key components of basement membrane and broad repertoire of aggregation factors
inferred← citeshttps://doi.org/10.1101/2024.04.19.590289openalex-snapshot
Proteomic analysis of the Aggregation Factor from the sponge Clathria (Microciona) prolifera suggests an ancient protein domain toolkit for allorecognition in animals
inferred← citeshttps://doi.org/10.1101/2024.05.12.593736openalex-snapshot
Acceleration of genome rearrangement in clitellate annelids
inferred← citeshttps://doi.org/10.1101/2024.05.29.594498openalex-snapshot
First chromosome-level genome assembly of the colonial tunicate Botryllus schlosseri
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