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Database of host-pathogen and related species interactions, and their global distribution

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/evan.20041openalex-snapshot
The global mammal parasite database: An online resource for infectious disease records in wild primates
inferredcites →https://doi.org/10.1016/j.prevetmed.2013.07.002openalex-snapshot
Using open-access taxonomic and spatial information to create a comprehensive database for the study of Mammalian and avian livestock and pet infections
inferredcites →https://doi.org/10.1016/s0140-6736(12)61689-4openalex-snapshot
Disability-adjusted life years (DALYs) for 291 diseases and injuries in 21 regions, 1990–2010: a systematic analysis for the Global Burden of Disease Study 2010
inferredcites →https://doi.org/10.1016/s0140-6736(14)61682-2openalex-snapshot
Global, regional, and national age–sex specifi c all-cause andcause-specifi c mortality for 240 causes of death, 1990–2013:a systematic analysis for the Global Burden of DiseaseStudy 2013
inferredcites →https://doi.org/10.1038/nature06536openalex-snapshot
Global trends in emerging infectious diseases
inferredcites →https://doi.org/10.1093/oso/9780198506201.003.0001openalex-snapshot
Ecology of wildlife diseases
inferredcites →https://doi.org/10.1093/oso/9780198506201.003.0003openalex-snapshot
Parasites and host population dynamics
inferredcites →https://doi.org/10.1098/rstb.2001.0888openalex-snapshot
Risk factors for human disease emergence
inferredcites →https://doi.org/10.1098/rstb.2001.0889openalex-snapshot
Diseases of humans and their domestic mammals: pathogen characteristics, host range and the risk of emergence
inferredcites →https://doi.org/10.1111/j.1523-1739.2006.00524.xopenalex-snapshot
Evidence for the Role of Infectious Disease in Species Extinction and Endangerment
inferredcites →https://doi.org/10.20506/rst.32.2.2249openalex-snapshot
World Health Organization Initiative to Estimate the Global Burden of Foodborne Diseases
inferredcites →https://doi.org/10.6084/m9.figshare.1381853openalex-snapshot
SpeciesInteractions_EID2
inferredcites →https://doi.org/10.6084/m9.figshare.1381854openalex-snapshot
LocationInteractions_EID2

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/alpento.10.209066zenodo-depositor-declared
inferred← citeshttps://doi.org/10.3897/mbmg.10.188340zenodo-depositor-declared
GUYASOILeDNA: a trans-kingdom and functional eDNA dataset on soil biodiversity from diverse land-cover types in French Guiana
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Bacterial pathogens associated with the plastisphere of surgical face masks and their dispersion potential in the coastal marine environment
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Shotgun metagenomic profiling reveals a high diversity of taxa and genes within biofilms formed on microplastics incubated in urbanised aquatic ecosystems
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Cost-effective expansion of protected areas reduces global zoonotic risk and biodiversity loss
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Network embedding unveils the hidden interactions in the mammalian virome
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The Global Synanthrome Project: A Call for an Exhaustive Study of Human Associates
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Effect of Indian monsoon on the glacial airborne bacteria over the Tibetan Plateau
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Presence of Rickettsia aeschlimannii, ‘Candidatus Rickettsia barbariae’ and Coxiella burnetii in ticks from livestock in Northwestern Algeria
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Molecular screening, regional infection patterns and phylogenetic characterization of spotted fever group Rickettsia in ticks from domestic animals in Uzbekistan
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Community-level respiration of prokaryotic microbes may rise with global warming
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Predicting the global mammalian viral sharing network using phylogeography
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Predicting mammalian hosts in which novel coronaviruses can be generated
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Divide-and-conquer: machine-learning integrates mammalian and viral traits with network features to predict virus-mammal associations
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Biological invasions facilitate zoonotic disease emergences
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Predicting host range expansion in parasitic mites using a global mammalian-acarine dataset
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A One Health framework for exploring zoonotic interactions demonstrated through a case study
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Diversity and transmission and zoonotic potential of microbes in true insectivores
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The neglected geography of human pathogens and diseases
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Urban-adapted mammal species have more known pathogens
inferred← citeshttps://doi.org/10.1038/s41564-021-00999-5openalex-snapshot
The science of the host–virus network
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A global-scale assessment of zoonotic virus diversity and spillover potential in urban-adapted mammal species
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Zoonotic host diversity increases in human-dominated ecosystems
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Integrating databases for spatial analysis of parasite-host associations and the novel Brazilian dataset
inferred← citeshttps://doi.org/10.1038/s41598-017-06948-9openalex-snapshot
Systematic Assessment of the Climate Sensitivity of Important Human and Domestic Animals Pathogens in Europe
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Metaphylogenetic analysis of global sewage reveals that bacterial strains associated with human disease show less degree of geographic clustering
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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago
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Disease mortality in domesticated animals is predicted by host evolutionary relationships
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Biodiversity Conservation, Ecosystem Services and One Health
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Detecting DNA of novel fungal pathogens using ResNets and a curated fungi-hosts data collection
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Polymers and immersion time shape bacterial pathogen and antibiotic resistance profiles in aquaculture facilities
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The Expectations and Challenges of Wildlife Disease Research in the Era of Genomics: Forecasting with a Horizon Scan-like Exercise
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Determinants of the Vertical Distribution of the Phyllosphere Differ Between Microbial Groups and the Epi- and Endosphere in a Tropical Forest
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Phylogenetic aggregation increases zoonotic potential of mammalian viruses
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How humans drive speciation as well as extinction
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Integration of shared-pathogen networks and machine learning reveals the key aspects of zoonoses and predicts mammalian reservoirs
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Past and future uses of text mining in ecology and evolution
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The African mosquito-borne diseasosome: geographical patterns, range expansion and future disease emergence
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Infectious disease macroecology: parasite diversity and dynamics across the globe
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The ghost of hosts past: impacts of host extinction on parasite specificity
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Predictions of primate–parasite coextinction
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Systems and synthetic biology perspective of the versatile plant-pathogenic and polysaccharide-producing bacterium Xanthomonas campestris
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Data proliferation, reconciliation, and synthesis in viral ecology
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Radiation Threats to Humans in Space and an alternative approach with Probiotics
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The Global Virome in One Network (VIRION): an atlas of vertebrate-virus associations
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The African mosquito-borne diseasosome: Geographical patterns and range expansion
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Monkeypox virus shows potential to infect a diverse range of native animal species across Europe, indicating high risk of becoming endemic in the region
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The impact of late Pleistocene mammal extinctions on pathogen richness in extant hosts
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Features that matter: evolutionary signatures that predict viral transmission routes
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Unveiling the diversity, transmission, and zoonotic potential of microbes in true insectivores
inferred← citeshttps://doi.org/10.1101/2024.12.18.629064openalex-snapshot
Risk assessment of zoonotic viruses in urban-adapted wildlife
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Insectivores exhibit superior microbial transmission efficiency and elevated zoonotic risk by 2035 relative to rodents and bats
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Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species
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Predicting the global mammalian viral sharing network using phylogeography
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Efficient Detection of Communities in Biological Bipartite Networks
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Algorithms for Balanced Graph Colorings with Applications in Parallel Computing
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Predicting missing links in global host–parasite networks
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Predicting primate–parasite associations using exponential random graph models
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Energy and physiological tolerance explain multi‐trophic soil diversity in temperate mountains
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Pathogeography: leveraging the biogeography of human infectious diseases for global health management
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Climate variation influences host specificity in avian malaria parasites
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Ancient oncogenesis, infection and human evolution
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Gauging support for macroecological patterns in helminth parasites
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Comparing methods for mapping global parasite diversity
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Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species
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Database Release: PPSDB , a Linked Open Data Knowledge Base for Protist–Prokaryote Symbioses
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Survey of Malassezia sp and dermatophytes in the cutaneous microbiome of free‐ranging golden‐headed lion tamarins (Leontopithecus chrysomelas ‐ Kuhl, 1820)
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The phylogenetic range of bacterial and viral pathogens of vertebrates
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Similar heterotrophic communities but distinct interactions supported by red and green‐snow algae in the Antarctic Peninsula
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Geodemography, Environment and Societal Characteristics Drive the Global Diversity of Emerging, Zoonotic and Human Pathogens
inferred← citeshttps://doi.org/10.1111/tbed.14361openalex-snapshot
Inherent Virus Characteristics and Host Range Drive the Zoonotic and Emerging Potential of Viruses
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Phenotype diffusion and one health: A proposed framework for investigating the plurality of obesity epidemics across many species
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The Global Virome in One Network (VIRION): an Atlas of Vertebrate-Virus Associations
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Fungal pathogens pose a potential threat to animal and plant health in desertified and pika-burrowed alpine meadows on the Tibetan Plateau
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Detecting Communities in Biological Bipartite Networks
inferred← citeshttps://doi.org/10.1145/3434749openalex-snapshot
Noise Corrected Sampling of Online Social Networks
inferred← citeshttps://doi.org/10.1177/11779322251415123openalex-snapshot
Zoon0PredV: Potential Virus Species Crossover Prediction Using Convolutional Neural Networks and Viral Protein Sequence Patterns
inferred← citeshttps://doi.org/10.1186/s13071-023-06000-yopenalex-snapshot
The global risk of infectious disease emergence from giant land snail invasion and pet trade
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Ontology based mining of pathogen–disease associations from literature
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Exploring the landscape of symbiotic diversity and distribution in unicellular ciliated protists
inferred← citeshttps://doi.org/10.1214/19-aoas1296openalex-snapshot
A hierarchical Bayesian model for predicting ecological interactions using scaled evolutionary relationships
inferred← citeshttps://doi.org/10.1371/journal.pntd.0005073openalex-snapshot
Animals in the Zika Virus Life Cycle: What to Expect from Megadiverse Latin American Countries
inferred← citeshttps://doi.org/10.1371/journal.pntd.0005604openalex-snapshot
Co-occurrence of viruses and mosquitoes at the vectors’ optimal climate range: An underestimated risk to temperate regions?
inferred← citeshttps://doi.org/10.1371/journal.ppat.1012629openalex-snapshot
Features that matter: Evolutionary signatures can predict viral transmission routes
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Prevalence and molecular identification of Nematodirus helvetianus in camels in Iraq
inferred← citeshttps://doi.org/10.1525/abt.2019.81.1.47openalex-snapshot
Fruit Flies & the Gut Microbiome: Redesign-Your-Bacteria Lab Exercise
inferred← citeshttps://doi.org/10.2139/ssrn.5376955openalex-snapshot
Two-Stage Valorization of Vinasse Via the Carboxylate Platform for Single Cell Protein Production
inferred← citeshttps://doi.org/10.2139/ssrn.5644463openalex-snapshot
Unveiling the Ecological Consequences of Microplastics on Microbial Life in Lake Victoria: Analysis of Plastisphere, Surface Water and Fish Gut Microbial Community
inferred← citeshttps://doi.org/10.21829/azm.2022.3812425openalex-snapshot
Blood-parasites (Haemosporida) of wild birds captured at different land uses within a tropical seasonal dry forest matrix
inferred← citeshttps://doi.org/10.23919/date.2019.8715024openalex-snapshot
A Brief Survey of Algorithms, Architectures, and Challenges toward Extreme-scale Graph Analytics
inferred← citeshttps://doi.org/10.32942/osf.io/euza8openalex-snapshot
The ghost of hosts past: impacts of host extinction on parasite specificity
inferred← citeshttps://doi.org/10.32942/osf.io/xzmp8openalex-snapshot
Predicting the tripartite network of mosquito-borne disease
inferred← citeshttps://doi.org/10.32942/x2zw4sopenalex-snapshot
PPSDB : A Linked Open Data knowledge base for protist-prokaryote symbiotic interactions
inferred← citeshttps://doi.org/10.3389/fitd.2026.1894025openalex-snapshot
Underrepresentation of African surveillance data in global arbovirus modeling
inferred← citeshttps://doi.org/10.3389/fmicb.2021.634043openalex-snapshot
Neutrophil and Eosinophil DNA Extracellular Trap Formation: Lessons From Pathogenic Fungi
inferred← citeshttps://doi.org/10.3389/fmicb.2024.1337368openalex-snapshot
Metabolites: a converging node of host and microbe to explain meta-organism
inferred← citeshttps://doi.org/10.3389/fvets.2024.1421158openalex-snapshot
Integrating animal welfare into the WHO pandemic treaty: a thematic analysis of civil society perspectives and comparison with treaty drafting
inferred← citeshttps://doi.org/10.3390/agriculture13010215openalex-snapshot
Screening and Identification of the Rhizosphere Fungal Communities Associated with Land Reclamation in Egypt
inferred← citeshttps://doi.org/10.3390/atmos12050654openalex-snapshot
Potential Human and Plant Pathogenic Species in Airborne PM10 Samples and Relationships with Chemical Components and Meteorological Parameters
inferred← citeshttps://doi.org/10.3390/idr14050076openalex-snapshot
Roles for Pathogen Interference in Influenza Vaccination, with Implications to Vaccine Effectiveness (VE) and Attribution of Influenza Deaths
inferred← citeshttps://doi.org/10.3390/jmse14191853openalex-snapshot
Comparison of Bacterial and Potentially Pathogenic Bacterial Communities in Ballast Water from Different Source Waters
inferred← citeshttps://doi.org/10.3390/microorganisms12020260openalex-snapshot
An Assessment of Human Opportunistic Pathogenic Bacteria on Daily Necessities in Nanjing City during Plum Rain Season
inferred← citeshttps://doi.org/10.3390/pathogens14070640openalex-snapshot
Healing with Risks: How Zoonotic Potential Influences the Use of Wild Mammals in Traditional Medicine
inferred← citeshttps://doi.org/10.3390/tropicalmed5020064openalex-snapshot
Disease Ecology of Rickettsial Species: A Data Science Approach
inferred← citeshttps://doi.org/10.3406/bavf.2020.70925openalex-snapshot
Maladies transmissibles et alteration de la biodiversite: quelles relations ?
inferred← citeshttps://doi.org/10.3406/bavf.2021.70929openalex-snapshot
Les coronavirus des bovins : clinique, épidémiologie, immunité et prévention
inferred← citeshttps://doi.org/10.3406/bavf.2021.70951openalex-snapshot
Élevage, biodiversité et émergences de pandémies
inferred← citeshttps://doi.org/10.5194/essd-2023-395-cc1openalex-snapshot
Reply on RC1
inferred← citeshttps://doi.org/10.5194/essd-2023-395-rc1openalex-snapshot
Comment on essd-2023-395
inferred← citeshttps://doi.org/10.5194/essd-2023-395-rc2openalex-snapshot
Comment on essd-2023-395
inferred← citeshttps://doi.org/10.5194/essd-2023-395-rc3openalex-snapshot
Comment on essd-2023-395
inferred← citeshttps://doi.org/10.5194/essd-2023-395-rc4openalex-snapshot
Comment on essd-2023-395
inferred← citeshttps://doi.org/10.6084/m9.figshare.25902333openalex-snapshot
Additional file 1 of Exploring the landscape of symbiotic diversity and distribution in unicellular ciliated protists
inferred← citeshttps://doi.org/10.6084/m9.figshare.26627989openalex-snapshot
Additional file 1 of The global risk of infectious disease emergence from giant land snail invasion and pet trade
inferred← citeshttps://doi.org/10.70675/fb08c422z63f9z4c1bz876dz9f49a5ede40copenalex-snapshot
Towards a better understanding of soil multi-trophic biodiversity through the use of environmental DNA metabarcoding
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