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Arginine side chain interactions and the role of arginine as a gating charge carrier in voltage sensitive ion channels

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/pro.2647openalex-snapshot

Arginine: Its pKa value revisited

inferredcites →https://doi.org/10.1002/prot.22927openalex-snapshot

Salt bridges: Geometrically specific, designable interactions

inferredcites →https://doi.org/10.1006/jmbi.1994.1022openalex-snapshot

Planar Stacking Interactions of Arginine and Aromatic Side-Chains in Proteins

inferredcites →https://doi.org/10.1016/0022-2836(88)90292-6openalex-snapshot

Distributions of water around amino acid residues in proteins

inferredcites →https://doi.org/10.1016/j.bpj.2011.02.003openalex-snapshot

310-Helix Conformation Facilitates the Transition of a Voltage Sensor S4 Segment toward the Down State

inferredcites →https://doi.org/10.1016/j.bpj.2012.04.021openalex-snapshot

Microscopic Origin of Gating Current Fluctuations in a Potassium Channel Voltage Sensor

inferredcites →https://doi.org/10.1016/j.bpj.2014.10.001openalex-snapshot

Voltage Sensor Gating Charge Transfer in a hERG Potassium Channel Model

inferredcites →https://doi.org/10.1016/j.neuron.2004.12.047openalex-snapshot

Voltage-Sensing Arginines in a Potassium Channel Permeate and Occlude Cation-Selective Pores

inferredcites →https://doi.org/10.1016/j.neuron.2005.08.020openalex-snapshot

Focused Electric Field across the Voltage Sensor of Potassium Channels

inferredcites →https://doi.org/10.1016/j.neuron.2010.08.021openalex-snapshot

Ion Channel Voltage Sensors: Structure, Function, and Pathophysiology

inferredcites →https://doi.org/10.1016/j.pbiomolbio.2007.03.016openalex-snapshot

Geometry of nonbonded interactions involving planar groups in proteins

inferredcites →https://doi.org/10.1016/s0896-6273(00)80143-9openalex-snapshot

Contribution of the S4 Segment to Gating Charge in the Shaker K+ Channel

inferredcites →https://doi.org/10.1021/bi048389gopenalex-snapshot

Dissecting Contributions to the Denaturant Sensitivities of Proteins

inferredcites →https://doi.org/10.1021/ci4000739openalex-snapshot

Interactions between Voltage Sensor and Pore Domains in a hERG K + Channel Model from Molecular Simulations and the Effects of a Voltage Sensor Mutation

inferredcites →https://doi.org/10.1021/ct300156hopenalex-snapshot

New Interaction Parameters for Charged Amino Acid Side Chains in the GROMOS Force Field

inferredcites →https://doi.org/10.1021/ja903478sopenalex-snapshot

Preferential Interactions of Guanidinum Ions with Aromatic Groups over Aliphatic Groups

inferredcites →https://doi.org/10.1021/jm061038aopenalex-snapshot

Propensities of Polar and Aromatic Amino Acids in Noncanonical Interactions: Nonbonded Contacts Analysis of Protein−Ligand Complexes in Crystal Structures

inferredcites →https://doi.org/10.1021/jp405418yopenalex-snapshot

The Different Interactions of Lysine and Arginine Side Chains with Lipid Membranes

inferredcites →https://doi.org/10.1021/jp500958ropenalex-snapshot

Evaluating the Strength of Salt Bridges: A Comparison of Current Biomolecular Force Fields

inferredcites →https://doi.org/10.1038/nature06265openalex-snapshot

Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment

inferredcites →https://doi.org/10.1038/nsmb.2768openalex-snapshot

Structural mechanism of voltage-dependent gating in an isolated voltage-sensing domain

inferredcites →https://doi.org/10.1038/nsmb.2783openalex-snapshot

X-ray crystal structure of voltage-gated proton channel

inferredcites →https://doi.org/10.1073/pnas.0702638104openalex-snapshot

Two atomic constraints unambiguously position the S4 segment relative to S1 and S2 segments in the closed state of Shaker K channel

inferredcites →https://doi.org/10.1073/pnas.0735920100openalex-snapshot

The hydration structure of guanidinium and thiocyanate ions: Implications for protein stability in aqueous solution

inferredcites →https://doi.org/10.1073/pnas.0812588106openalex-snapshot

Urea, but not guanidinium, destabilizes proteins by forming hydrogen bonds to the peptide group

inferredcites →https://doi.org/10.1073/pnas.1102724108openalex-snapshot

Intermediate states of the Kv1.2 voltage sensor from atomistic molecular dynamics simulations

inferredcites →https://doi.org/10.1073/pnas.1103397108openalex-snapshot

Control of a final gating charge transition by a hydrophobic residue in the S2 segment of a K + channel voltage sensor

inferredcites →https://doi.org/10.1073/pnas.1104808108openalex-snapshot

Arginine residues at internal positions in a protein are always charged

inferredcites →https://doi.org/10.1073/pnas.1406161111openalex-snapshot

Moving gating charges through the gating pore in a Kv channel voltage sensor

inferredcites →https://doi.org/10.1073/pnas.96.17.9459openalex-snapshot

Cation-π interactions in structural biology

inferredcites →https://doi.org/10.1085/jgp.201310992openalex-snapshot

Functional interactions of voltage sensor charges with an S2 hydrophobic plug in hERG channels

inferredcites →https://doi.org/10.1085/jgp.201311036openalex-snapshot

Asymmetric functional contributions of acidic and aromatic side chains in sodium channel voltage-sensor domains

inferredcites →https://doi.org/10.1085/jgp.201411210openalex-snapshot

Tracking S4 movement by gating pore currents in the bacterial sodium channel NaChBac

inferredcites →https://doi.org/10.1093/bioinformatics/btg224openalex-snapshot

PISCES: a protein sequence culling server

inferredcites →https://doi.org/10.1093/nar/28.1.235openalex-snapshot

The Protein Data Bank

inferredcites →https://doi.org/10.1093/oso/9780199633616.003.0004openalex-snapshot

Atlas of protein side-chain interactions

inferredcites →https://doi.org/10.1109/mcse.2011.37openalex-snapshot

The NumPy Array: A Structure for Efficient Numerical Computation

inferredcites →https://doi.org/10.1110/ps.073397708openalex-snapshot

A buried lysine that titrates with a normal pKa: Role of conformational flexibility at the protein–water interface as a determinant of pKavalues

inferredcites →https://doi.org/10.1126/science.1185954openalex-snapshot

A Gating Charge Transfer Center in Voltage Sensors

inferredcites →https://doi.org/10.1126/science.1216533openalex-snapshot

Mechanism of Voltage Gating in Potassium Channels

inferredcites →https://doi.org/10.1529/biophysj.107.108290openalex-snapshot

The Interaction of Guanidinium Ions with a Model Peptide

inferredcites →https://doi.org/10.1529/biophysj.107.116681openalex-snapshot

Zwitterionic Phospholipids and Sterols Modulate Antimicrobial Peptide-Induced Membrane Destabilization

inferredcites →https://doi.org/10.3389/fphar.2011.00002openalex-snapshot

The Voltage-Sensing Domain of Kv7.2 Channels as a Molecular Target for Epilepsy-Causing Mutations and Anticonvulsants

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inferred← citeshttps://doi.org/10.1073/pnas.2424135122openalex-snapshot

Material properties of biomolecular condensates emerge from nanoscale dynamics

inferred← citeshttps://doi.org/10.1074/jbc.ra118.004767openalex-snapshot

Two distinct conformations of factor H regulate discrete complement-binding functions in the fluid phase and at cell surfaces

inferred← citeshttps://doi.org/10.1074/jbc.ra120.016103openalex-snapshot

A drug-resistant β-lactamase variant changes the conformation of its active-site proton shuttle to alter substrate specificity and inhibitor potency

inferred← citeshttps://doi.org/10.1080/07388551.2024.2387167openalex-snapshot

Insulin fibrillation under physicochemical parameters of bioprocessing and intervention by peptides and surface-active agents

inferred← citeshttps://doi.org/10.1080/07391102.2020.1864475openalex-snapshot

A conserved arginine residue in a staphylococcal anti-sigma factor is required to preserve its kinase activity, structure, and stability

inferred← citeshttps://doi.org/10.1080/19336950.2019.1666456openalex-snapshot

Voltage vs. Ligand II: Structural insights of the intrinsic flexibility in cyclic nucleotide-gated channels

inferred← citeshttps://doi.org/10.1089/vim.2020.0056openalex-snapshot

The Structural Features of Henipavirus Matrix Protein Driving Intracellular Trafficking

inferred← citeshttps://doi.org/10.1093/europace/euag156openalex-snapshot

C-terminal long-QT type 1 R562S-Kv7.1 variant, the first variant in helix C impairing β-adrenergic response of the slow delayed rectifier K+ channel

inferred← citeshttps://doi.org/10.1093/femsre/fuab034openalex-snapshot

Diversity, properties and functions of bacterial arginases

inferred← citeshttps://doi.org/10.1093/jac/dkaa371openalex-snapshot

Aspirin, sodium benzoate and sodium salicylate reverse resistance to colistin in Enterobacteriaceae andPseudomonas aeruginosa

inferred← citeshttps://doi.org/10.1101/2022.12.19.521128openalex-snapshot

Dynamics of activation in the voltage-sensing domain of Ci-VSP

inferred← citeshttps://doi.org/10.1101/2024.01.31.578271openalex-snapshot

TopEC: Improved classification of enzyme function by a localized 3D protein descriptor and 3D Graph Neural Networks

inferred← citeshttps://doi.org/10.1101/2024.05.02.592181openalex-snapshot

Advancing thermostability of the key photorespiratory enzyme glycerate 3-kinase by structure-based recombination

inferred← citeshttps://doi.org/10.1101/439992openalex-snapshot

Comparative analysis of active sites in P-loop nucleoside triphosphatases suggests an ancestral activation mechanism

inferred← citeshttps://doi.org/10.1109/globconpt57482.2022.9938256openalex-snapshot

Dipeptide Constituting Oppositely Charged Amino Acids as Molecular Rectifier

inferred← citeshttps://doi.org/10.1111/1744-7917.70190openalex-snapshot

CRISPR/Cas9‐based white pupae mutant lines in Bactrocera spp. for sterile insect technique applications

inferred← citeshttps://doi.org/10.1111/1750-3841.15368openalex-snapshot

Effects of lysine and arginine on the properties of low‐salt mince gel from striped catfish ( Pangasianodon hypophthalmus )

inferred← citeshttps://doi.org/10.1111/febs.16751openalex-snapshot

Proton channels in molluscs: A new bivalvian‐specific minimal H V 4 channel

inferred← citeshttps://doi.org/10.1111/pbi.14508openalex-snapshot

Increasing thermostability of the key photorespiratory enzyme glycerate 3‐kinase by structure‐based recombination

inferred← citeshttps://doi.org/10.1126/sciadv.adq4624openalex-snapshot

Structural basis for membrane association and catalysis by phosphatidylserine synthase in Escherichia coli

inferred← citeshttps://doi.org/10.1128/msphere.00554-19openalex-snapshot

Characterization of the Self-Resistance Mechanism to Dityromycin in the Streptomyces Producer Strain

inferred← citeshttps://doi.org/10.1186/s12915-022-01370-8openalex-snapshot

Kinesin-3 motors are fine-tuned at the molecular level to endow distinct mechanical outputs

inferred← citeshttps://doi.org/10.1186/s13071-024-06545-6openalex-snapshot

Low nucleotide diversity of the Plasmodium falciparum AP2-EXP2 gene among clinical samples from Ghana

inferred← citeshttps://doi.org/10.1371/journal.pone.0253347openalex-snapshot

SARS-CoV-2 uses major endothelial integrin αvβ3 to cause vascular dysregulation in-vitro during COVID-19

inferred← citeshttps://doi.org/10.1371/journal.pone.0320891openalex-snapshot

Increased preference for lysine over arginine in spike proteins of SARS-CoV-2 BA.2.86 variant and its daughter lineages

inferred← citeshttps://doi.org/10.21203/rs.3.rs-3357207/v1openalex-snapshot

Salinity-driven adaptations in freshwater-to-marine microorganisms: Genetic and transcriptional modulation of amino acid encoding

inferred← citeshttps://doi.org/10.26434/chemrxiv-2023-j0lmsopenalex-snapshot

Morphologies of proteinoids

inferred← citeshttps://doi.org/10.3389/fimmu.2025.1648546openalex-snapshot

HIV subtype-specific gp140-CD4 binding, Temsavir efficacy, and identification of novel adhesion inhibitors against Chinese HIV strains

inferred← citeshttps://doi.org/10.3389/fmicb.2025.1631386openalex-snapshot

Mapping cross-reactive residues in the G-H loop of foot-and-mouth disease virus: insights for serotype-specific design

inferred← citeshttps://doi.org/10.3389/fneur.2020.00108openalex-snapshot

Cationic Arginine-Rich Peptides (CARPs): A Novel Class of Neuroprotective Agents With a Multimodal Mechanism of Action

inferred← citeshttps://doi.org/10.3389/fnhum.2026.1772352openalex-snapshot

Infrared photons generated by voltage-gated sodium channel dynamics: a hypothesis for cooperative electrodynamic interactions at the axon initial segment

inferred← citeshttps://doi.org/10.3389/fphar.2022.1010119openalex-snapshot

Evolutionary coupling analysis guides identification of mistrafficking-sensitive variants in cardiac K+ channels: Validation with hERG

inferred← citeshttps://doi.org/10.3389/fpls.2025.1584909openalex-snapshot

Depletion reveals role of bicarbonate in the photosynthetic electron transport chain of Limnospira maxima

inferred← citeshttps://doi.org/10.3390/biom10060849openalex-snapshot

A Ribosome Interaction Surface Sensitive to mRNA GCN Periodicity

inferred← citeshttps://doi.org/10.3390/biom13071035openalex-snapshot

Voltage-Gated Proton Channels in the Tree of Life

inferred← citeshttps://doi.org/10.3390/biom15020180openalex-snapshot

Comparative Transcriptomic Analysis Provides Insight into Spatiotemporal Expression Patterns of Pivotal Genes During Critical Growth Stages in Min Pig Breed

inferred← citeshttps://doi.org/10.3390/cancers13071711openalex-snapshot

RGD-Binding Integrins Revisited: How Recently Discovered Functions and Novel Synthetic Ligands (Re-)Shape an Ever-Evolving Field

inferred← citeshttps://doi.org/10.3390/cimb46080470openalex-snapshot

Aquaporin Modulation by Cations, a Review

inferred← citeshttps://doi.org/10.3390/foods14060940openalex-snapshot

Advances in Reducing Salt Content in Processed Meats with Basic Amino Acids

inferred← citeshttps://doi.org/10.3390/ijms22031335openalex-snapshot

Arginine Methylation Regulates Ribosome CAR Function

inferred← citeshttps://doi.org/10.3390/ijms23031725openalex-snapshot

In Silico Study to Predict the Structural and Functional Consequences of SNPs on Biomarkers of Ovarian Cancer (OC) and BPA Exposure-Associated OC

inferred← citeshttps://doi.org/10.3390/ijms232112771openalex-snapshot

The Solvation of the E. coli CheY Phosphorylation Site Mapped by XFMS

inferred← citeshttps://doi.org/10.3390/ijms241914472openalex-snapshot

A Designed Analog of an Antimicrobial Peptide, Crabrolin, Exhibits Enhanced Anti-Proliferative and In Vivo Antimicrobial Activity

inferred← citeshttps://doi.org/10.3390/ijms27198651openalex-snapshot

Characterization of an Amphiphilic Exopolymer from Rhodothermus marinus DSM 16675 Reveals Its Potential as a Natural Bioemulsifier

inferred← citeshttps://doi.org/10.3390/md20120763openalex-snapshot

Polypharmacological Cell-Penetrating Peptides from Venomous Marine Animals Based on Immunomodulating, Antimicrobial, and Anticancer Properties

inferred← citeshttps://doi.org/10.3390/microorganisms8070993openalex-snapshot

Innate Viral Sensor MDA5 and Coxsackievirus Interplay in Type 1 Diabetes Development

inferred← citeshttps://doi.org/10.3390/molecules26134029openalex-snapshot

The Role of Organic Small Molecules in Pain Management

inferred← citeshttps://doi.org/10.3390/molecules26247453openalex-snapshot

Natural Peptides Inducing Cancer Cell Death: Mechanisms and Properties of Specific Candidates for Cancer Therapeutics

inferred← citeshttps://doi.org/10.3390/pharmaceutics18050544openalex-snapshot

Modulation of Intravenous Immunoglobulin Aggregation, Subvisible Particle Formation, and Viscosity by Acetylated Amino Acids

inferred← citeshttps://doi.org/10.3390/reports5020022openalex-snapshot

Neuronal and Non-Neuronal GABA in COVID-19: Relevance for Psychiatry

inferred← citeshttps://doi.org/10.37099/mtu.dc.etdr/979openalex-snapshot

Mechanisms of Pathogen Inactivation in Wastewater and Pharmaceutical Applications

inferred← citeshttps://doi.org/10.55665/troiamedj.1751695openalex-snapshot

Electrophysiology of pancreatic beta cells: a comprehensive review of ion channel function, electrical activity, and secretory mechanisms

inferred← citeshttps://doi.org/10.6084/m9.figshare.20472382openalex-snapshot

Additional file 1 of Kinesin-3 motors are fine-tuned at the molecular level to endow distinct mechanical outputs

inferred← citeshttps://doi.org/10.6084/m9.figshare.20472385openalex-snapshot

Additional file 2 of Kinesin-3 motors are fine-tuned at the molecular level to endow distinct mechanical outputs

inferred← citeshttps://doi.org/10.64898/2026.01.26.701751openalex-snapshot

The sequence context of RG/RGG motifs determines condensate formation, transportin-1 binding and chaperoning

inferred← citeshttps://doi.org/10.70675/820bb8bez270dz46e3zab8az8e7db5636465openalex-snapshot

Protein Surface Recognition with Urea-based foldamers : application to the design of ligands targeting histone chaperone proteins

inferred← citeshttps://doi.org/10.7150/thno.59535openalex-snapshot

The therapeutic potential of inorganic polyphosphate: A versatile physiological polymer to control coronavirus disease (COVID-19)

inferred← citeshttps://doi.org/10.7554/elife.105761openalex-snapshot