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Phylogenomics redefines the evolutionary history of mosquitoes

https://doi.org/10.1073/pnas.2519291122

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Soft‐Bodied Fossils Are Not Simply Rotten Carcasses – Toward a Holistic Understanding of Exceptional Fossil Preservation

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BUSCO: Assessing Genomic Data Quality and Beyond

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Data Analysis

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The ‘effective number of codons’ used in a gene

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Landscape and mosquito community impact the avian Plasmodium infection in Culex pipiens

inferredcites →https://doi.org/10.1016/j.meegid.2020.104576openalex-snapshot

A phylogenetic study of Haemocystidium parasites and other Haemosporida using complete mitochondrial genome sequences

inferredcites →https://doi.org/10.1016/j.pt.2013.09.003openalex-snapshot

Could culicine mosquitoes transmit human malaria?

inferredcites →https://doi.org/10.1016/j.pt.2018.10.003openalex-snapshot

Of Genes and Genomes: Mosquito Evolution and Diversity

inferredcites →https://doi.org/10.1016/j.pt.2023.04.004openalex-snapshot

Origin and diversity of malaria parasites and other Haemosporida

inferredcites →https://doi.org/10.1016/j.tig.2006.02.003openalex-snapshot

Phylogenomics: the beginning of incongruence?

inferredcites →https://doi.org/10.1016/j.tree.2019.05.008openalex-snapshot

Untangling the Multiple Ecological Radiations of Early Mammals

inferredcites →https://doi.org/10.1016/j.ympev.2018.01.019openalex-snapshot

DiscoVista: Interpretable visualizations of gene tree discordance

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Drivers, dynamics, and control of emerging vector-borne zoonotic diseases

inferredcites →https://doi.org/10.1016/s1055-7903(02)00326-3openalex-snapshot

An index of substitution saturation and its application

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The effect of global change on mosquito-borne disease

inferredcites →https://doi.org/10.1016/s2542-5196(21)00132-7openalex-snapshot

Projecting the risk of mosquito-borne diseases in a warmer and more populated world: a multi-model, multi-scenario intercomparison modelling study

inferredcites →https://doi.org/10.1038/nmeth.4285openalex-snapshot

ModelFinder: fast model selection for accurate phylogenetic estimates

inferredcites →https://doi.org/10.1038/s41467-023-41764-yopenalex-snapshot

Phylogenomics reveals the history of host use in mosquitoes

inferredcites →https://doi.org/10.1038/s41564-019-0376-yopenalex-snapshot

Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus

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The current and future global distribution and population at risk of dengue

inferredcites →https://doi.org/10.1038/s41576-023-00620-xopenalex-snapshot

Incongruence in the phylogenomics era

inferredcites →https://doi.org/10.1038/s41598-020-74883-3openalex-snapshot

Culicidae evolutionary history focusing on the Culicinae subfamily based on mitochondrial phylogenomics

inferredcites →https://doi.org/10.1038/s42003-018-0191-7openalex-snapshot

Elevated atmospheric CO2 promoted speciation in mosquitoes (Diptera, Culicidae)

inferredcites →https://doi.org/10.1073/pnas.0900233106openalex-snapshot

Evidence for an ancient adaptive episode of convergent molecular evolution

inferredcites →https://doi.org/10.1073/pnas.0906802106openalex-snapshot

Climate directly influences Eocene mammal faunal dynamics in North America

inferredcites →https://doi.org/10.1073/pnas.1012675108openalex-snapshot

Episodic radiations in the fly tree of life

inferredcites →https://doi.org/10.1073/pnas.2003914117openalex-snapshot

The enigma of Oligocene climate and global surface temperature evolution

inferredcites →https://doi.org/10.1073/pnas.2003976117openalex-snapshot

A new malaria vector in Africa: Predicting the expansion range of Anopheles stephensi and identifying the urban populations at risk

inferredcites →https://doi.org/10.1073/pnas.2023058118openalex-snapshot

Phylogenomic conflict coincides with rapid morphological innovation

inferredcites →https://doi.org/10.1073/pnas.94.13.6815openalex-snapshot

Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment

inferredcites →https://doi.org/10.1079/9781800628014.0000openalex-snapshot

Composition and Nature of the Culicidae (Mosquitoes)

inferredcites →https://doi.org/10.1080/08912963.2019.1570185openalex-snapshot

Priscoculex burmanicus n. gen. et sp. (Diptera: Culicidae: Anophelinae) from mid-Cretaceous Myanmar amber

inferredcites →https://doi.org/10.1080/10635150490445779openalex-snapshot

Modeling Compositional Heterogeneity

inferredcites →https://doi.org/10.1080/10635150500234609openalex-snapshot

An Empirical Assessment of Long-Branch Attraction Artefacts in Deep Eukaryotic Phylogenomics

inferredcites →https://doi.org/10.1093/bioinformatics/btab096openalex-snapshot

PhyKIT: a broadly applicable UNIX shell toolkit for processing and analyzing phylogenomic data

inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot

APE: Analyses of Phylogenetics and Evolution in R language

inferredcites →https://doi.org/10.1093/bioinformatics/bti079openalex-snapshot

HyPhy: hypothesis testing using phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btq243openalex-snapshot

The Newick utilities: high-throughput phylogenetic tree processing in the U nix shell

inferredcites →https://doi.org/10.1093/bioinformatics/btv646openalex-snapshot

PHYLUCE is a software package for the analysis of conserved genomic loci

inferredcites →https://doi.org/10.1093/bioinformatics/bty633openalex-snapshot

ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

inferredcites →https://doi.org/10.1093/molbev/msaa015openalex-snapshot

IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

inferredcites →https://doi.org/10.1093/molbev/msaa106openalex-snapshot

New Methods to Calculate Concordance Factors for Phylogenomic Datasets

inferredcites →https://doi.org/10.1093/molbev/msab199openalex-snapshot

BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes

inferredcites →https://doi.org/10.1093/molbev/msv022openalex-snapshot

Less Is More: An Adaptive Branch-Site Random Effects Model for Efficient Detection of Episodic Diversifying Selection

inferredcites →https://doi.org/10.1093/molbev/msx197openalex-snapshot

Large Variation in the Ratio of Mitochondrial to Nuclear Mutation Rate across Animals: Implications for Genetic Diversity and the Use of Mitochondrial DNA as a Molecular Marker

inferredcites →https://doi.org/10.1093/molbev/msx281openalex-snapshot

UFBoot2: Improving the Ultrafast Bootstrap Approximation

inferredcites →https://doi.org/10.1093/molbev/msx285openalex-snapshot

Mode and Rate of Evolution of Haemosporidian Mitochondrial Genomes: Timing the Radiation of Avian Parasites

inferredcites →https://doi.org/10.1093/molbev/msy069openalex-snapshot

Estimating Improved Partitioning Schemes for Ultraconserved Elements

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040532openalex-snapshot

Inferring the number of evolutionary events from DNA coding sequence differences.

inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

inferredcites →https://doi.org/10.1093/sysbio/sys004openalex-snapshot

Ultraconserved Elements Anchor Thousands of Genetic Markers Spanning Multiple Evolutionary Timescales

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Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice

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Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

inferredcites →https://doi.org/10.1093/ve/vex042openalex-snapshot

TreeTime: Maximum-likelihood phylodynamic analysis

inferredcites →https://doi.org/10.1101/gr.213959.116openalex-snapshot

metaSPAdes: a new versatile metagenomic assembler

inferredcites →https://doi.org/10.1101/gr.218123.116openalex-snapshot

Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals

inferredcites →https://doi.org/10.1109/tcbb.2023.3335823openalex-snapshot

CodonU: A Python Package for Codon Usage Analysis

inferredcites →https://doi.org/10.1111/2041-210x.12754openalex-snapshot

Identifying conserved genomic elements and designing universal bait sets to enrich them

inferredcites →https://doi.org/10.1111/ele.13675openalex-snapshot

The influence of vector‐borne disease on human history: socio‐ecological mechanisms

inferredcites →https://doi.org/10.1111/j.1096-0031.1999.tb00391.xopenalex-snapshot

Long-Branch Abstractions

inferredcites →https://doi.org/10.1111/j.1096-0031.2005.00059.xopenalex-snapshot

A review of long‐branch attraction

inferredcites →https://doi.org/10.1111/j.1365-3113.2008.00437.xopenalex-snapshot

Phylogenetics and temporal diversification of the earliest true flies (Insecta: Diptera) based on multiple nuclear genes

inferredcites →https://doi.org/10.1111/j.1469-185x.2012.00234.xopenalex-snapshot

Diptera vectors of avian Haemosporidian parasites: untangling parasite life cycles and their taxonomy

inferredcites →https://doi.org/10.1111/syen.12489openalex-snapshot

Phylogeny and temporal diversification of mosquitoes (Diptera: Culicidae) with an emphasis on the Neotropical fauna

inferredcites →https://doi.org/10.1126/sciadv.1501005openalex-snapshot

A new time tree reveals Earth history’s imprint on the evolution of modern birds

inferredcites →https://doi.org/10.1126/science.1253451openalex-snapshot

Whole-genome analyses resolve early branches in the tree of life of modern birds

inferredcites →https://doi.org/10.1126/science.1257570openalex-snapshot

Phylogenomics resolves the timing and pattern of insect evolution

inferredcites →https://doi.org/10.1126/science.1258522openalex-snapshot

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes

inferredcites →https://doi.org/10.11646/palaeoentomology.7.4.13openalex-snapshot

Burmaculex (Diptera: Culicidae) from mid-Cretaceous Burmese amber, with the first description of a male and three new species

inferredcites →https://doi.org/10.11646/zootaxa.1668.1.28openalex-snapshot

The Culicidae (Diptera): a review of taxonomy, classification and phylogeny*

inferredcites →https://doi.org/10.11646/zootaxa.4079.4.5openalex-snapshot

The Cretaceous Fossil Burmaculex antiquus Confirmed as the Earliest Known Lineage of Mosquitoes (Diptera: Culicidae)

inferredcites →https://doi.org/10.11646/zootaxa.5016.2.6openalex-snapshot

Mosquitoes (Diptera: Culicidae) in Eocene amber from the Rovno region, Ukraine

inferredcites →https://doi.org/10.11646/zootaxa.5424.1.9openalex-snapshot

Libanoculex intermedius is not a mosquito (Diptera: Culicidae): It is a chaoborid (Chaoboridae)

inferredcites →https://doi.org/10.1186/1471-2148-7-214openalex-snapshot

BEAST: Bayesian evolutionary analysis by sampling trees

inferredcites →https://doi.org/10.1186/1471-2148-9-298openalex-snapshot

Phylogenetic analysis and temporal diversification of mosquitoes (Diptera: Culicidae) based on nuclear genes and morphology

inferredcites →https://doi.org/10.1186/s12859-018-2129-yopenalex-snapshot

ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees

inferredcites →https://doi.org/10.1186/s12862-023-02131-zopenalex-snapshot

Phylogenetic congruence, conflict and consilience between molecular and morphological data

inferredcites →https://doi.org/10.1371/journal.pbio.0040088openalex-snapshot

Relaxed Phylogenetics and Dating with Confidence

inferredcites →https://doi.org/10.1371/journal.pbio.0060204openalex-snapshot

Direct Estimation of the Mitochondrial DNA Mutation Rate in Drosophila melanogaster

inferredcites →https://doi.org/10.1371/journal.pbio.1000602openalex-snapshot

Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough

inferredcites →https://doi.org/10.1371/journal.pcbi.1006650openalex-snapshot

BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

inferredcites →https://doi.org/10.1371/journal.pgen.1002764openalex-snapshot

Detecting Individual Sites Subject to Episodic Diversifying Selection

inferredcites →https://doi.org/10.3390/life11030181openalex-snapshot

Chronological Incongruences between Mitochondrial and Nuclear Phylogenies of Aedes Mosquitoes

inferredcites →https://doi.org/10.5281/zenodo.15145663openalex-snapshot

Table 1 in A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae)

inferredcites →https://doi.org/10.7717/peerj.7755openalex-snapshot

Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/asp.84.e176547zenodo-depositor-declared

Phylogenetic relationships of Culex (Diptera: Culicidae) based on mitogenomes

inferred← citeshttps://doi.org/10.1038/d41586-025-03244-9openalex-snapshot

Current mosquitoes evolved more recently than previously thought

inferred← citeshttps://doi.org/10.1038/s42003-025-09250-xopenalex-snapshot

Population genomics reveals an ancient origin of heartworms in canids

inferred← citeshttps://doi.org/10.1126/sciadv.aea2316openalex-snapshot

Malaria shaped human spatial organization for the past 74 thousand years

inferred← citeshttps://doi.org/10.64898/2026.05.04.720205openalex-snapshot

The Culicinae are Monophyletic and Ancient: A response to Pierce et al. 2025

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