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Phylogeny of Anthospermeae of the Coffee Family Inferred Using Clock and Nonclock Models

https://doi.org/10.1086/703353
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/tax.562006openalex-snapshot
Paraphyly of Paederieae, recognition of Putorieae and expansion of Plocama (Rubiaceae‐Rubioideae)
inferredcites →https://doi.org/10.1002/tax.583009openalex-snapshot
Evolutionary relationships in the Spermacoceae alliance (Rubiaceae) using information from six molecular loci: insights into systematic affinities of Neohymenopogon and Mouretia
inferredcites →https://doi.org/10.1006/clad.1996.0003openalex-snapshot
COMBINED AND SEPARATE ANALYSES OF MORPHOLOGICAL AND MOLECULAR DATA IN THE PLANT FAMILY RUBIACEAE
inferredcites →https://doi.org/10.1006/mpev.1998.0545openalex-snapshot
Phylogenetic Utility of the External Transcribed Spacer (ETS) of 18S–26S rDNA: Congruence of ETS and ITS Trees ofCalycadenia(Compositae)
inferredcites →https://doi.org/10.1006/mpev.2001.0977openalex-snapshot
Inferring the History of the Polyploid Silene aegaea (Caryophyllaceae) Using Plastid and Homoeologous Nuclear DNA Sequences
inferredcites →https://doi.org/10.1006/viro.1999.0056openalex-snapshot
Possible Emergence of New Geminiviruses by Frequent Recombination
inferredcites →https://doi.org/10.1007/bf00037152openalex-snapshot
Universal primers for amplification of three non-coding regions of chloroplast DNA
inferredcites →https://doi.org/10.1007/bf00173172openalex-snapshot
Comparison of the evolution of ribulose-1, 5-biphosphate carboxylase (rbcL) and atpB-rbcL noncoding spacer sequences in a recent plant group, the tribe Rubieae (Rubiaceae)
inferredcites →https://doi.org/10.1007/bf00182389openalex-snapshot
Analyzing the mosaic structure of genes
inferredcites →https://doi.org/10.1007/bf00985458openalex-snapshot
Phylogeny and classification of the subfamily Rubioideae (Rubiaceae)
inferredcites →https://doi.org/10.1007/bf00985737openalex-snapshot
Therps16 intron and the phylogeny of theRubioideae (Rubiaceae)
inferredcites →https://doi.org/10.1007/bf00986193openalex-snapshot
Phylogeny ofRubiaceae-Rubieae inferred from the sequence of a cpDNA intergene region
inferredcites →https://doi.org/10.1007/bf00987959openalex-snapshot
Chloroplastrps16 intron phylogeny of the tribeSileneae (Caryophyllaceae)
inferredcites →https://doi.org/10.1007/s00606-002-0192-2openalex-snapshot
inferredcites →https://doi.org/10.1007/s00606-004-0155-xopenalex-snapshot
Studies in the tribe Spermacoceae (Rubiaceae-Rubioideae): the circumscriptions of Amphiasma and Pentanopsis and the affinities of Phylohydrax
inferredcites →https://doi.org/10.1016/j.ympev.2005.03.011openalex-snapshot
The internal transcribed spacer of nuclear ribosomal DNA in the gymnosperm Gnetum
inferredcites →https://doi.org/10.1016/j.ympev.2008.04.006openalex-snapshot
Rare and enigmatic genera (Dunnia, Schizocolea, Colletoecema), sisters to species-rich clades: Phylogeny and aspects of conservation biology in the coffee family
inferredcites →https://doi.org/10.1016/j.ympev.2008.09.025openalex-snapshot
The phylogenetic utility of chloroplast and nuclear DNA markers and the phylogeny of the Rubiaceae tribe Spermacoceae
inferredcites →https://doi.org/10.1016/j.ympev.2014.10.004openalex-snapshot
When do species-tree and concatenated estimates disagree? An empirical analysis with higher-level scincid lizard phylogeny
inferredcites →https://doi.org/10.1016/s1055-7903(02)00240-3openalex-snapshot
Phylogenetics of asterids based on 3 coding and 3 non-coding chloroplast DNA markers and the utility of non-coding DNA at higher taxonomic levels
inferredcites →https://doi.org/10.1071/sb00021openalex-snapshot
Molecular phylogeny of the tribe Anthospermeae (Rubiaceae): Systematic and biogeographic implications
inferredcites →https://doi.org/10.1071/sb16047openalex-snapshot
Metapopulation vicariance in the Pacific genus Coprosma (Rubiaceae) and its Gondwanan relatives
inferredcites →https://doi.org/10.1071/sb9880191openalex-snapshot
The taxonomic postition of the Australian endemic Durringtonia (Rubiacese)
inferredcites →https://doi.org/10.1073/pnas.1001225107openalex-snapshot
An uncorrelated relaxed-clock analysis suggests an earlier origin for flowering plants
inferredcites →https://doi.org/10.1073/pnas.1106085108openalex-snapshot
Speciation with gene flow on Lord Howe Island
inferredcites →https://doi.org/10.1073/pnas.1319091111openalex-snapshot
The fossilized birth–death process for coherent calibration of divergence-time estimates
inferredcites →https://doi.org/10.1073/pnas.241370698openalex-snapshot
Evaluation of methods for detecting recombination from DNA sequences: Computer simulations
inferredcites →https://doi.org/10.1073/pnas.95.1.235openalex-snapshot
Nuclear ribosomal DNA evidence for a western North American origin of Hawaiian and South American species of Sanicula (Apiaceae)
inferredcites →https://doi.org/10.1080/0028825x.1974.10428630openalex-snapshot
Coprosma talbrockiei sp. nov. and allied creeping species (Rubiaceae)
inferredcites →https://doi.org/10.1080/01621459.1995.10476572openalex-snapshot
Bayes Factors
inferredcites →https://doi.org/10.1080/10635150490264699openalex-snapshot
Bayesian Phylogenetic Analysis of Combined Data
inferredcites →https://doi.org/10.1080/10635150490423278openalex-snapshot
Recent Origin and Phylogenetic Utility of Divergent ITS Putative Pseudogenes: A Case Study from Naucleeae (Rubiaceae)
inferredcites →https://doi.org/10.1080/10635150490468675openalex-snapshot
A Phylogenetic Mixture Model for Detecting Pattern-Heterogeneity in Gene Sequence or Character-State Data
inferredcites →https://doi.org/10.1080/106351599260085openalex-snapshot
More Characters or More Taxa for a Robust Phylogeny—Case Study from the Coffee Family (Rubiaceae)
inferredcites →https://doi.org/10.1086/599077openalex-snapshot
Time Tree of Rubiaceae: Phylogeny and Dating the Family, Subfamilies, and Tribes
inferredcites →https://doi.org/10.1086/600082openalex-snapshot
A Statistical Approach for Distinguishing Hybridization and Incomplete Lineage Sorting
inferredcites →https://doi.org/10.1089/aid.1995.11.1423openalex-snapshot
Identification of Breakpoints in Intergenotypic Recombinants of HIV Type 1 by Bootscanning
inferredcites →https://doi.org/10.1093/bib/bbu015openalex-snapshot
Causes, consequences and solutions of phylogenetic incongruence
inferredcites →https://doi.org/10.1093/bioinformatics/16.6.562openalex-snapshot
RDP: detection of recombination amongst aligned sequences
inferredcites →https://doi.org/10.1093/bioinformatics/16.7.573openalex-snapshot
Sister-Scanning: a Monte Carlo procedure for assessing signals in recombinant sequences
inferredcites →https://doi.org/10.1093/bioinformatics/bts199openalex-snapshot
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
inferredcites →https://doi.org/10.1093/bioinformatics/btu531openalex-snapshot
AliView: a fast and lightweight alignment viewer and editor for large datasets
inferredcites →https://doi.org/10.1093/bioinformatics/btw108openalex-snapshot
A simple method to control over-alignment in the MAFFT multiple sequence alignment program
inferredcites →https://doi.org/10.1093/molbev/msh123openalex-snapshot
Bayesian Phylogenetic Model Selection Using Reversible Jump Markov Chain Monte Carlo
inferredcites →https://doi.org/10.1093/molbev/msi084openalex-snapshot
Widespread Recombination in Published Animal mtDNA Sequences1
inferredcites →https://doi.org/10.1093/molbev/msm193openalex-snapshot
A General Comparison of Relaxed Molecular Clock Models
inferredcites →https://doi.org/10.1093/molbev/msr228openalex-snapshot
Relaxed Clocks and Inferences of Heterogeneous Patterns of Nucleotide Substitution and Divergence Time Estimates across Whales and Dolphins (Mammalia: Cetacea)
inferredcites →https://doi.org/10.1093/molbev/mss243openalex-snapshot
Accurate Model Selection of Relaxed Molecular Clocks in Bayesian Phylogenetics
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/molbev/msv026openalex-snapshot
The Effects of Partitioning on Phylogenetic Inference
inferredcites →https://doi.org/10.1093/sysbio/syp072openalex-snapshot
Relaxed Molecular Clocks, the Bias–Variance Trade-off, and the Quality of Phylogenetic Inference
inferredcites →https://doi.org/10.1093/sysbio/syq085openalex-snapshot
Improving Marginal Likelihood Estimation for Bayesian Phylogenetic Model Selection
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1093/sysbio/sys058openalex-snapshot
A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera
inferredcites →https://doi.org/10.1111/boj.12130openalex-snapshot
Biogeographic insights on PacificCoprosma(Rubiaceae) indicate two colonizations to the Hawaiian Islands
inferredcites →https://doi.org/10.1111/j.1095-8339.1982.tb00369.xopenalex-snapshot
The delimitation of the tribe Anthospermeae and its affinities to the Paederieae (Rubiaceae)
inferredcites →https://doi.org/10.1111/j.1096-0031.2010.00329.xopenalex-snapshot
SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information
inferredcites →https://doi.org/10.1111/j.1365-3113.2012.00640.xopenalex-snapshot
Phylogeny and classification of whirligig beetles (Coleoptera: Gyrinidae): relaxed‐clock model outperforms parsimony and time‐free Bayesian analyses
inferredcites →https://doi.org/10.1111/j.1438-8677.1977.tb02816.xopenalex-snapshot
Die Rubiaceen der Kanarischen Inseln
inferredcites →https://doi.org/10.1111/j.1467-7652.2007.00245.xopenalex-snapshot
The complete nucleotide sequence of the coffee ( Coffea arabica L.) chloroplast genome: organization and implications for biotechnology and phylogenetic relationships amongst angiosperms
inferredcites →https://doi.org/10.1111/j.1469-185x.2012.00240.xopenalex-snapshot
Understanding phylogenetic incongruence: lessons from phyllostomid bats
inferredcites →https://doi.org/10.1111/j.1558-5646.1995.tb02309.xopenalex-snapshot
DISCORDANCE BETWEEN NUCLEAR AND CHLOROPLAST PHYLOGENIES IN THE HEUCHERA GROUP (SAXIFRAGACEAE)
inferredcites →https://doi.org/10.1111/j.1759-6831.2012.00196.xopenalex-snapshot
Foonchewia guangdongensis gen. et sp. nov. (Rubioideae: Rubiaceae) and its systematic position inferred from chloroplast sequences and morphology
inferredcites →https://doi.org/10.1139/b07-134openalex-snapshot
5.8S motifs for the identification of pseudogenic ITS regions
inferredcites →https://doi.org/10.1186/1471-2164-12-211openalex-snapshot
Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing
inferredcites →https://doi.org/10.1214/aos/1176344136openalex-snapshot
Estimating the Dimension of a Model
inferredcites →https://doi.org/10.1214/ss/1177011136openalex-snapshot
Inference from Iterative Simulation Using Multiple Sequences
inferredcites →https://doi.org/10.12705/642.2openalex-snapshot
Phylogenetic affinities of Myrioneuron and Cyanoneuron , generic limits of the tribe Argostemmateae and description of a new Asian tribe, Cyanoneuroneae (Rubiaceae)
inferredcites →https://doi.org/10.1371/journal.pbio.0040088openalex-snapshot
Relaxed Phylogenetics and Dating with Confidence
inferredcites →https://doi.org/10.1385/0896032442openalex-snapshot
PCR Protocols
inferredcites →https://doi.org/10.1534/genetics.106.068874openalex-snapshot
An Exact Nonparametric Method for Inferring Mosaic Structure in Sequence Triplets
inferredcites →https://doi.org/10.2307/2399889openalex-snapshot
Subfamilial and Tribal Relationships in the Rubiaceae Based on rbcL Sequence Data
inferredcites →https://doi.org/10.2307/2419070openalex-snapshot
Gene Trees and Species Trees: Molecular Systematics as One-Character Taxonomy
inferredcites →https://doi.org/10.2307/25065412openalex-snapshot
Phylogeny of the tribe Cinchoneae (Rubiaceae), its position in Cinchonoideae, and description of a new genus, Ciliosemina
inferredcites →https://doi.org/10.2307/2666588openalex-snapshot
Peratanthe Is a Synonym of Nertera (Rubiaceae, Anthospermeae)
inferredcites →https://doi.org/10.2307/3667888openalex-snapshot
Pollen Morphology of the Tribes Anthospermeae and Paederieae (Rubiaceae) in Relation to Taxonomy
inferredcites →https://doi.org/10.2307/4108481openalex-snapshot
Durringtonia (Durringtonieae), a New Genus and Tribe of Rubiaceae from Australia
inferredcites →https://doi.org/10.2307/4117844openalex-snapshot
Taxonomic Affinities of Medusagyne oppositifolia (Medusagynaceae)
inferredcites →https://doi.org/10.3732/ajb.0900287openalex-snapshot
Patterns and causes of incongruence between plastid and nuclear Senecioneae (Asteraceae) phylogenies
inferredcites →https://doi.org/10.3732/ajb.1700255openalex-snapshot
Conflicting results from mitochondrial genomic data challenge current views of Rubiaceae phylogeny
inferredcites →https://doi.org/10.3732/ajb.92.4.642openalex-snapshot
Monophyly of Kelloggia Torrey ex Benth. (Rubiaceae) and evolution of its intercontinental disjunction between western North America and eastern Asia
inferredcites →https://doi.org/10.58828/nuy00866openalex-snapshot
By their fruit you will recognise them: species notes and typifications in Western Australian species of Opercularia (Rubiaceae: Anthosperminae)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.38201/abc.v55.2zenodo-depositor-declared
Anthospermum, an unusual name for an African genus of Rubiaceae
inferred← citeshttps://doi.org/10.1002/ece3.10868openalex-snapshot
Phylogenomics and topological conflicts in the tribe Anthospermeae (Rubiaceae)
inferred← citeshttps://doi.org/10.1002/tax.13167openalex-snapshot
Phylogeny and classification of the coffee family (Rubiaceae, Gentianales): Overview and outlook
inferred← citeshttps://doi.org/10.1093/botlinnean/boaf078openalex-snapshot
Spore morphology and evolution in Isoetes (Isoetales)
inferred← citeshttps://doi.org/10.1093/botlinnean/boaf112openalex-snapshot
Two new species of Currant Bush Coprosma (Rubiaceae) from an endemic radiation on Lord Howe Island
inferred← citeshttps://doi.org/10.1111/jse.12566openalex-snapshot
Conflicting phylogenetic signals in genomic data of the coffee family (Rubiaceae)
inferred← citeshttps://doi.org/10.1111/njb.03732openalex-snapshot
New chromosome counts on Rubiaceae from Africa and the Western Indian Ocean islands
inferred← citeshttps://doi.org/10.1186/s12862-022-01988-wopenalex-snapshot
Phylogeny of Merlin’s grass (Isoetaceae): revealing an “Amborella syndrome” and the importance of geographic distribution for understanding current and historical diversity
inferred← citeshttps://doi.org/10.1371/journal.pone.0302365openalex-snapshot
Plastid phylogenomics and cytonuclear discordance in Rubioideae, Rubiaceae
inferred← citeshttps://doi.org/10.3389/fpls.2021.645735openalex-snapshot
Phylogenomics With Hyb-Seq Unravels Korean Hosta Evolution
inferred← citeshttps://doi.org/10.3389/fpls.2022.967456openalex-snapshot
Target capture data resolve recalcitrant relationships in the coffee family (Rubioideae, Rubiaceae)
inferred← citeshttps://doi.org/10.5962/p.366316openalex-snapshot
Pomax ammophila Ngugi (Rubiaceae), a new species from arid, central Australia
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