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GenomeVx: simple web-based creation of editable circular chromosome maps

https://doi.org/10.1093/bioinformatics/btm598
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/j.1460-2075.1986.tb04464.xopenalex-snapshot
The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression
inferredcites →https://doi.org/10.1007/s11103-005-8882-0openalex-snapshot
Complete Chloroplast Genome Sequence of Glycine max and Comparative Analyses with other Legume Genomes
inferredcites →https://doi.org/10.1016/j.febslet.2004.10.106openalex-snapshot
The complete mitochondrial genome of the yeast Kluyveromyces thermotolerans
inferredcites →https://doi.org/10.1038/265687a0openalex-snapshot
Nucleotide sequence of bacteriophage φX174 DNA
inferredcites →https://doi.org/10.1038/276236a0openalex-snapshot
Nucleotide sequence of bacteriophage G4 DNA
inferredcites →https://doi.org/10.1038/322572a0openalex-snapshot
Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA
inferredcites →https://doi.org/10.1093/bioinformatics/btg152openalex-snapshot
Genome visualization made fast and simple
inferredcites →https://doi.org/10.1093/bioinformatics/btg195openalex-snapshot
GenoMap, a circular genome data viewer
inferredcites →https://doi.org/10.1093/bioinformatics/bth352openalex-snapshot
Automatic annotation of organellar genomes with DOGMA
inferredcites →https://doi.org/10.1093/bioinformatics/bti054openalex-snapshot
Circular genome visualization and exploration using CGView
inferredcites →https://doi.org/10.1126/science.1084564openalex-snapshot
The Human Genome Project: Lessons from Large-Scale Biology
inferredcites →https://doi.org/10.1186/1471-2148-6-77openalex-snapshot
Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids
inferredcites →https://doi.org/10.1186/1471-2164-8-228openalex-snapshot
Rapid evolutionary change of common bean (Phaseolus vulgaris L) plastome, and the genomic diversification of legume chloroplasts
inferredcites →https://doi.org/10.1186/1471-2229-6-17openalex-snapshot
Rapid and accurate pyrosequencing of angiosperm plastid genomes.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Ramisyllis kingghidorahi n. sp., a new branching annelid from Japan
inferred← citeshttps://doi.org/10.1080/00222933.2022.2150581zenodo-depositor-declared
The mitochondrial genome of the endemic and endangered trumpet-nosed bat Musonycteris harrisoni (Chiroptera: Phyllostomidae)
inferred← citeshttps://doi.org/10.1080/00222933.2024.2350106zenodo-depositor-declared
The complete mitochondrial genome of the leopard shark Triakis semifasciata (Triakidae)
inferred← citeshttps://doi.org/10.1080/00222933.2024.2354543zenodo-depositor-declared
Characterisation of the complete mitochondrial genome of the imperiled Pearl darter Percina aurora (Perciformes: Percidae)
inferred← citeshttps://doi.org/10.1080/00222933.2025.2511191zenodo-depositor-declared
The complete mitochondrial genome of the swordfish, Xiphias gladius (Istophoriformes: Xiphiidae)
inferred← citeshttps://doi.org/10.1080/00222933.2025.2548252zenodo-depositor-declared
The complete mitochondrial genome of the Atlantic sharpnose shark Rhizoprionodon terraenovae (Carcharhiniformes: Carcharhinidae)
inferred← citeshttps://doi.org/10.1080/00222933.2025.2595191zenodo-depositor-declared
A newly assembled mitochondrial genome of Cynomops mexicanus and comparative mitochondrial genomics in free-tailed bats (Chiroptera: Molossidae)
inferred← citeshttps://doi.org/10.37828/em.2021.40.12zenodo-depositor-declared
Complete mitochondrial genome of an Arctic Collared Lemming subspecies endemic to the Novaya Zemlya Archipelago, Russia
inferred← citeshttps://doi.org/10.6620/zs.2022.61-69zenodo-depositor-declared
The Complete Mitogenome of Xeruca formosensis (Rathbun, 1921) (Crustacea: Brachyura: Ocypodidae), a Fiddler Crab Endemic to Taiwan, with its Phylogenetic Position in the Family.
inferred← citeshttps://doi.org/10.1002/aps3.1040openalex-snapshot
Complete plastome sequencing from Toona (Meliaceae) and phylogenomic analyses within Sapindales
inferred← citeshttps://doi.org/10.1002/aps3.11286openalex-snapshot
Primers for complete chloroplast genome sequencing in Magnolia
inferred← citeshttps://doi.org/10.1002/ece3.4427openalex-snapshot
The first complete mitochondrial genome of the Mariana Trench Freyastera benthophila (Asteroidea: Brisingida: Brisingidae) allows insights into the deep‐sea adaptive evolution of Brisingida
inferred← citeshttps://doi.org/10.1002/ece3.6125openalex-snapshot
The complete chloroplast genome of Myriophyllum spicatum reveals a 4‐kb inversion and new insights regarding plastome evolution in Haloragaceae
inferred← citeshttps://doi.org/10.1002/ece3.71795openalex-snapshot
The Mitochondrial Genome of the Imperiled Goliath Grouper Epinephelus itajara : Selective Pressures in Protein Coding Genes, Secondary Structure of tRNA Genes, and Phylogenetic Placement
inferred← citeshttps://doi.org/10.1002/ece3.73585openalex-snapshot
Mitochondrial Genome of the Indo‐Pacific Mesophotic Coral Leptoseris columna (Scleractinia: Agariciidae) Assembled Using PacBio Long‐Read Sequencing
inferred← citeshttps://doi.org/10.1002/ece3.8818openalex-snapshot
Comparative analysis of the complete mitochondrial genomes of four cordyceps fungi
inferred← citeshttps://doi.org/10.1007/13836_2020_82openalex-snapshot
Population Genomics of Organelle Genomes in Crop Plants
inferred← citeshttps://doi.org/10.1007/978-1-0716-0997-2_5openalex-snapshot
Sequencing of Complete Chloroplast Genomes
inferred← citeshttps://doi.org/10.1007/978-1-4939-7343-9_18openalex-snapshot
Visualization of Phage Genomic Data: Comparative Genomics and Publication-Quality Diagrams
inferred← citeshttps://doi.org/10.1007/978-3-030-70420-9_10openalex-snapshot
Complete Chloroplast Genome Sequences of Coconut cv. Kopyor Green Dwarf and Comparative Genome Analysis to Oil Palm, Date Palm, Sago Palm, and Miniature Sugar Palm
inferred← citeshttps://doi.org/10.1007/978-3-030-73746-7_9openalex-snapshot
Date Palm (Phoenix dactylifera L.) Chloroplast Genome
inferred← citeshttps://doi.org/10.1007/978-94-007-2920-9_5openalex-snapshot
Plastid Genomes of Seed Plants
inferred← citeshttps://doi.org/10.1007/978-981-19-3627-2_43-1openalex-snapshot
Date Palm: Genomic Designing for Improved Nutritional Quality
inferred← citeshttps://doi.org/10.1007/978-981-19-4169-6_43openalex-snapshot
Date Palm: Genomic Designing for Improved Nutritional Quality
inferred← citeshttps://doi.org/10.1007/s00253-018-9399-1openalex-snapshot
Application of bacteriophages in simultaneously controlling Escherichia coli O157:H7 and extended-spectrum beta-lactamase producing Escherichia coli
inferred← citeshttps://doi.org/10.1007/s00284-019-01812-7openalex-snapshot
Mobile Genetic Elements in Pseudomonas stutzeri
inferred← citeshttps://doi.org/10.1007/s00294-016-0595-1openalex-snapshot
Completion of the mitochondrial genome sequence of onion (Allium cepa L.) containing the CMS-S male-sterile cytoplasm and identification of an independent event of the ccmF N gene split
inferred← citeshttps://doi.org/10.1007/s00294-016-0631-1openalex-snapshot
Chloroplast genome structures in Gentiana (Gentianaceae), based on three medicinal alpine plants used in Tibetan herbal medicine
inferred← citeshttps://doi.org/10.1007/s00338-023-02419-yopenalex-snapshot
A first genomic portrait of the deep-water azooxanthellate reef-building coral Madracis myriaster: genome size, repetitive elements, nuclear RNA gene operon, mitochondrial genome, and phylogenetic placement in the family Pocilloporidae
inferred← citeshttps://doi.org/10.1007/s00338-024-02569-7openalex-snapshot
The mitochondrial genomes of the reef-dwelling spiny lobsters Panulirus echinatus and Panulirus interruptus with insights into the phylogeny and adaptive evolution of protein-coding genes in the Achelata
inferred← citeshttps://doi.org/10.1007/s00425-015-2303-7openalex-snapshot
The complete chloroplast genome of colchicine plants (Colchicum autumnale L. and Gloriosa superba L.) and its application for identifying the genus
inferred← citeshttps://doi.org/10.1007/s00436-024-08321-yopenalex-snapshot
Complete mitochondrial genome of Penicillidia dufourii (Diptera: Hippoboscoidea: Nycteribiidae) and phylogenetic relationship
inferred← citeshttps://doi.org/10.1007/s00438-024-02099-5openalex-snapshot
De novo assembly of the complete mitochondrial genome of Mycetophylax simplex Emery, 1888 through organelle targeting revels no substantial expansion of gene spacers, but rather some slightly shorter genes
inferred← citeshttps://doi.org/10.1007/s10142-021-00815-7openalex-snapshot
An empirical analysis of mtSSRs: could microsatellite distribution patterns explain the evolution of mitogenomes in plants?
inferred← citeshttps://doi.org/10.1007/s10493-019-00440-xopenalex-snapshot
The mitochondrial genome of the ornate sheep tick, Dermacentor marginatus
inferred← citeshttps://doi.org/10.1007/s10493-025-01066-yopenalex-snapshot
The first complete mitochondrial genome of Spinturnix psi (Dermanyssoidea, Spinturnicidae): gene content, composition, rearrangement and phylogenetic implications
inferred← citeshttps://doi.org/10.1007/s10811-018-1547-6openalex-snapshot
Intrageneric chloroplast genome comparison in the genus Euglena (Phylum: Euglenophyta) with annotated chloroplast genomes of Euglena hiemalis and Euglena clara
inferred← citeshttps://doi.org/10.1007/s11033-021-06940-7openalex-snapshot
The complete mitochondrial genome of the 'Zacatuche' Volcano rabbit (Romerolagus diazi), an endemic and endangered species from the Volcanic Belt of Central Mexico
inferred← citeshttps://doi.org/10.1007/s11033-024-09270-6openalex-snapshot
Comparative mitogenomics of Brachiopods reveals conservatism in articulate species and unusualness in inarticulate species
inferred← citeshttps://doi.org/10.1007/s11033-024-09700-5openalex-snapshot
Characterization of the mitochondrial genomes of the Mexican endemic bats Corynorhinus mexicanus and Corynorhinus leonpaniaguae (Chiroptera: Vespertilionidae)
inferred← citeshttps://doi.org/10.1007/s11103-011-9753-5openalex-snapshot
Recent loss of plastid-encoded ndh genes within Erodium (Geraniaceae)
inferred← citeshttps://doi.org/10.1007/s11103-014-0179-8openalex-snapshot
Characterization of mango (Mangifera indica L.) transcriptome and chloroplast genome
inferred← citeshttps://doi.org/10.1007/s11105-011-0373-7openalex-snapshot
The Chloroplast Genome Sequence of Date Palm (Phoenix dactylifera L. cv. ‘Aseel’)
inferred← citeshttps://doi.org/10.1007/s11105-013-0616-xopenalex-snapshot
Complete Chloroplast Genome of Chionographis japonica (Willd.) Maxim. (Melanthiaceae): Comparative Genomics and Evaluation of Universal Primers for Liliales
inferred← citeshttps://doi.org/10.1007/s11120-011-9622-8openalex-snapshot
High-throughput pyrosequencing of the chloroplast genome of a highly neutral-lipid-producing marine pennate diatom, Fistulifera sp. strain JPCC DA0580
inferred← citeshttps://doi.org/10.1007/s11262-025-02197-5openalex-snapshot
Genomic analysis of Androctonus mauritanicus toursvirus: first evidence of Ascoviridae in arachnids
inferred← citeshttps://doi.org/10.1007/s11295-012-0469-8openalex-snapshot
Complete sequence of the chloroplast genome from pear (Pyrus pyrifolia): genome structure and comparative analysis
inferred← citeshttps://doi.org/10.1007/s11295-013-0604-1openalex-snapshot
The chloroplast genome sequence of Syzygium cumini (L.) and its relationship with other angiosperms
inferred← citeshttps://doi.org/10.1007/s11295-014-0729-xopenalex-snapshot
Primers for 52 polymorphic regions in the Quercus rubra chloroplast, 47 of which amplify across 11 tracheophyte clades
inferred← citeshttps://doi.org/10.1007/s11295-015-0892-8openalex-snapshot
Complete chloroplast genome sequence of pineapple (Ananas comosus)
inferred← citeshttps://doi.org/10.1007/s11295-016-0970-6openalex-snapshot
Complete chloroplast genome sequences of Eucommia ulmoides: genome structure and evolution
inferred← citeshttps://doi.org/10.1007/s11816-013-0281-4openalex-snapshot
Complete sequence and genetic features of the mitochondrial genome of Pyropia tenera (Rhodophyta)
inferred← citeshttps://doi.org/10.1007/s11816-013-0314-zopenalex-snapshot
Complete mitochondrial genome sequence of Pyropia yezoensis (Bangiales, Rhodophyta) from Korea
inferred← citeshttps://doi.org/10.1007/s12250-015-3658-4openalex-snapshot
Genome sequencing and analysis of a granulovirus isolated from the Asiatic rice leafroller, Cnaphalocrocis medinalis
inferred← citeshttps://doi.org/10.1007/s12250-018-0047-9openalex-snapshot
Genome Characteristics of the Cyclophragma Undans Nucleopolyhedrovirus: A Distinct Species in Group I of Alphabaculovirus
inferred← citeshttps://doi.org/10.1007/s12686-017-0842-xopenalex-snapshot
Complete mitochondrial genome and phylogenetic analysis of Sichuan deer (Cervus elaphus macneilli)
inferred← citeshttps://doi.org/10.1007/s12686-017-0919-6openalex-snapshot
The complete mitochondrial genome sequence and phylogenetic analysis of white-lipped deer (Cervus albirostris)
inferred← citeshttps://doi.org/10.1007/s12686-018-1024-1openalex-snapshot
The complete mitochondrial genome and phylogeny of a wild goral from the western Sichuan of China (Naemorhedus caudatus griseus)
inferred← citeshttps://doi.org/10.1007/s13205-022-03209-zopenalex-snapshot
Identification and validation of SSR markers for Xanthomonas axonopodis pv. punicae an incitant of bacterial blight of pomegranate
inferred← citeshttps://doi.org/10.1007/s13205-023-03850-2openalex-snapshot
Comparative mitochondrial genome analysis reveals a candidate ORF for cytoplasmic male sterility in tropical onion
inferred← citeshttps://doi.org/10.1007/s13580-015-0061-xopenalex-snapshot
Complete chloroplast genomic sequence of Citrus platymamma determined by combined analysis of Sanger and NGS data
inferred← citeshttps://doi.org/10.1016/j.bse.2015.06.015openalex-snapshot
The mitochondrial genomes of Pecten albicans and Pecten maximus (Bivalvia: Pectinidae) reveal a novel gene arrangement with low genetic differentiation
inferred← citeshttps://doi.org/10.1016/j.crvi.2014.07.001openalex-snapshot
Corrected sequence of the wheat plastid genome
inferred← citeshttps://doi.org/10.1016/j.gene.2012.02.022openalex-snapshot
The complete mitochondrial genome of Microtus fortis calamorum (Arvicolinae, Rodentia) and its phylogenetic analysis
inferred← citeshttps://doi.org/10.1016/j.gene.2012.07.020openalex-snapshot
Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes
inferred← citeshttps://doi.org/10.1016/j.gene.2013.07.100openalex-snapshot
Comparative genomics of four Liliales families inferred from the complete chloroplast genome sequence of Veratrum patulum O. Loes. (Melanthiaceae)
inferred← citeshttps://doi.org/10.1016/j.gene.2015.01.056openalex-snapshot
Characterization of the Macropodus opercularis complete mitochondrial genome and family Channidae taxonomy using Illumina-based de novo transcriptome sequencing
inferred← citeshttps://doi.org/10.1016/j.gene.2015.07.041openalex-snapshot
An unusual mitochondrial genome structure of the tonguefish, Cynoglossus trigrammus: Control region translocation and a long additional non-coding region inversion
inferred← citeshttps://doi.org/10.1016/j.gene.2015.12.005openalex-snapshot
The complete chloroplast genome of Gentiana straminea (Gentianaceae), an endemic species to the Sino-Himalayan subregion
inferred← citeshttps://doi.org/10.1016/j.gene.2021.145624openalex-snapshot
Comparative mitochondrial genomics of sponge-dwelling snapping shrimps in the genus Synalpheus: Exploring differences between eusocial and non-eusocial species and insights into phylogenetic relationships in caridean shrimps
inferred← citeshttps://doi.org/10.1016/j.gene.2021.145868openalex-snapshot
The complete mitochondrial genome of the Honduran white bat Ectophylla alba (Allen 1982) (Chiroptera: Phyllostomidae)
inferred← citeshttps://doi.org/10.1016/j.gene.2022.146896openalex-snapshot
Mitochondrial genomes of the land hermit crab Coenobita clypeatus (Anomura: Paguroidea) and the mole crab Emerita talpoida (Anomura: Hippoidea) with insights into phylogenetic relationships in the Anomura (Crustacea: Decapoda)
inferred← citeshttps://doi.org/10.1016/j.gene.2023.147295openalex-snapshot
The mitochondrial genomes of big-eared bats, Macrotus waterhousii and Macrotus californicus (Chiroptera: Phyllostomidae: Macrotinae)
inferred← citeshttps://doi.org/10.1016/j.gene.2023.147588openalex-snapshot
Comparative mitochondrial genomics of American nectar-feeding long-nosed bats Leptonycteris spp. with insights into the phylogeny of the family Phyllostomidae
inferred← citeshttps://doi.org/10.1016/j.gene.2024.148492openalex-snapshot
Comparative mitochondrial genomics of endemic Mexican vesper yellow bats genus Rhogeessa (Chiroptera: Vespertilionidae) and insights into internal relationships in the family Vespertilionidae
inferred← citeshttps://doi.org/10.1016/j.gene.2024.148671openalex-snapshot
Low depth sequencing reveals the critically endangered Batagur kachuga (Red-crowned roofed turtle) mitochondrial genome and its evolutionary implications
inferred← citeshttps://doi.org/10.1016/j.genrep.2016.12.006openalex-snapshot
Characterization of the complete chloroplast genome of alfalfa (Medicago sativa) (Leguminosae)
inferred← citeshttps://doi.org/10.1016/j.genrep.2024.102094openalex-snapshot
Mitogenome based adaptations and phylogeny of Beetal goats in India
inferred← citeshttps://doi.org/10.1016/j.genrep.2025.102137openalex-snapshot
Comprehensive immunoinformatics and structural biology based design for novel peptide vaccines against Epstein-Barr virus
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2018.06.129openalex-snapshot
Characterization of the mitochondrial genomes of three species in the ectomycorrhizal genus Cantharellus and phylogeny of Agaricomycetes
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2018.10.020openalex-snapshot
The complete mitochondrial genome of Budorcas taxicolor tibetana (Artiodactyla: Bovidae) and comparison with other Caprinae species: Insight into the phylogeny of the genus Budorcas
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2018.10.038openalex-snapshot
The mitochondrial genomes of Statilia maculata and S. nemoralis (Mantidae: Mantinae) with different duplications of trnR genes
inferred← citeshttps://doi.org/10.1016/j.jarmap.2025.100684openalex-snapshot
Development of chloroplast InDel markers from Angelica gigas Nakai, providing insight into intraspecific and interspecific genetic diversity in Angelica species
inferred← citeshttps://doi.org/10.1016/j.lwt.2020.109945openalex-snapshot
Effects of bacteriophage on inhibition and removal of mixed biofilm of enterohemorrhagic Escherichia coli O157:H7 and O91:H-
inferred← citeshttps://doi.org/10.1016/j.margen.2011.06.005openalex-snapshot
Mitogenome of the small abalone Haliotis diversicolor Reeve and phylogenetic analysis within Gastropoda
inferred← citeshttps://doi.org/10.1016/j.margen.2013.12.002openalex-snapshot
The chloroplast genome of the diatom Seminavis robusta: New features introduced through multiple mechanisms of horizontal gene transfer
inferred← citeshttps://doi.org/10.1016/j.margen.2014.04.007openalex-snapshot
Sequence and comparison of mitochondrial genomes in the genus Nerita (Gastropoda: Neritimorpha: Neritidae) and phylogenetic considerations among gastropods
inferred← citeshttps://doi.org/10.1016/j.margen.2019.100735openalex-snapshot
Microscopic ossicle analyses and the complete mitochondrial genome sequence of Holothuria (Roweothuria) polii (Echinodermata; Holothuroidea) provide new information to support the phylogenetic positioning of this sea cucumber species
inferred← citeshttps://doi.org/10.1016/j.meegid.2021.104924openalex-snapshot
Molecular characterization of a carbapenem-resistant Enterobacter hormaechei ssp. xiangfangensis co-harbouring blaNDM-1 and a chromosomally encoded phage-linked blaCTX-M-15 genes
inferred← citeshttps://doi.org/10.1016/j.mgene.2013.10.004openalex-snapshot
Complete Arabis alpina chloroplast genome sequence and insight into its polymorphism
inferred← citeshttps://doi.org/10.1016/j.molp.2016.10.018openalex-snapshot
Draft Genome Sequence of Mentha longifolia and Development of Resources for Mint Cultivar Improvement
inferred← citeshttps://doi.org/10.1016/j.parint.2023.102769openalex-snapshot
Complete mitogenome of Nycteribia allotopa Speiser, 1901 (Diptera, Hippoboscoidea, Nycteribiidae) and comparative analysis of mitochondrial genomes of Nycteribiidae
inferred← citeshttps://doi.org/10.1016/j.pld.2019.07.003openalex-snapshot
Plastome sequencing of Myripnois dioica and comparison within Asteraceae
inferred← citeshttps://doi.org/10.1016/j.plgene.2023.100414openalex-snapshot
Complete genome of the kikuyu grass chloroplast (Cenchrus clandestinus) and comparative analysis within the subfamily Panicoideae
inferred← citeshttps://doi.org/10.1016/j.ttbdis.2013.02.002openalex-snapshot
Phylogenetic analysis of the mitochondrial genomes and nuclear rRNA genes of ticks reveals a deep phylogenetic structure within the genus Haemaphysalis and further elucidates the polyphyly of the genus Amblyomma with respect to Amblyomma sphenodonti and Amblyomma elaphense
inferred← citeshttps://doi.org/10.1016/j.ttbdis.2013.10.009openalex-snapshot
Molecular phylogeny of soft ticks (Ixodida: Argasidae) inferred from mitochondrial genome and nuclear rRNA sequences
inferred← citeshttps://doi.org/10.1016/j.ympev.2010.12.005openalex-snapshot
The mitochondrial genome of Bacillus stick insects (Phasmatodea) and the phylogeny of orthopteroid insects
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.03.004openalex-snapshot
Phylogenetic analysis of ticks (Acari: Ixodida) using mitochondrial genomes and nuclear rRNA genes indicates that the genus Amblyomma is polyphyletic
inferred← citeshttps://doi.org/10.1016/j.ympev.2014.03.017openalex-snapshot
Phylogenetic analysis of mitochondrial genome sequences indicates that the cattle tick, Rhipicephalus (Boophilus) microplus, contains a cryptic species
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.12.006openalex-snapshot
Phylogenomic and structural analyses of 18 complete plastomes across nearly all families of early-diverging eudicots, including an angiosperm-wide analysis of IR gene content evolution
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.12.011openalex-snapshot
Phylogenetic relationships of Burmeistera (Campanulaceae: Lobelioideae): Combining whole plastome with targeted loci data in a recent radiation
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.04.033openalex-snapshot
Resolving the systematic positions of enigmatic taxa: Manipulating the chloroplast genome data of Saxifragales
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.04.041openalex-snapshot
Expansion and systematics redefinition of the most threatened freshwater mussel family, the Margaritiferidae
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.07.021openalex-snapshot
Plastome phylogenomics of the early-diverging eudicot family Berberidaceae
inferred← citeshttps://doi.org/10.1017/s0007485324000762openalex-snapshot
The complete mitochondrial genome of Brachytarsina amboinensis (Diptera: Hippoboscoidea: Streblidae) provides new insights into phylogenetic relationships of Hippoboscoidea
inferred← citeshttps://doi.org/10.1017/s0031182022001184openalex-snapshot
The complete mitogenome of the Asian lung fluke Paragonimus skrjabini miyazakii and its implications for the family Paragonimidae (Trematoda: Platyhelminthes)
inferred← citeshttps://doi.org/10.1017/s003118202300032xopenalex-snapshot
Complete mitochondrial genome of Penicillidia jenynsii (Diptera: Hippoboscoidea: Nycteribiidae) and phylogenetic relationship
inferred← citeshttps://doi.org/10.1017/s0031182024000064openalex-snapshot
The complete mitochondrial genome of 3 species of allocreadiids (Digenea, Allocreadiidae): characterization and phylogenetic position within the order Plagiorchiida
inferred← citeshttps://doi.org/10.1017/s1742758417000157openalex-snapshot
Comparison of the mitochondrial genomes of the Old and New World strains of the legume pod borer, Maruca vitrata (Lepidoptera: Crambidae)
inferred← citeshttps://doi.org/10.1021/acs.est.9b05919openalex-snapshot
Comprehensive Understanding of the Plasmid-Mediated Colistin Resistance Gene mcr-1 in Aquatic Environments
inferred← citeshttps://doi.org/10.1038/cr.2017.124openalex-snapshot
A high-quality genome assembly of quinoa provides insights into the molecular basis of salt bladder-based salinity tolerance and the exceptional nutritional value
inferred← citeshttps://doi.org/10.1038/s41437-019-0242-yopenalex-snapshot
Mesozoic mitogenome rearrangements and freshwater mussel (Bivalvia: Unionoidea) macroevolution
inferred← citeshttps://doi.org/10.1038/s41467-019-08409-5openalex-snapshot
The genome of broomcorn millet
inferred← citeshttps://doi.org/10.1038/s41467-024-49902-wopenalex-snapshot
Inaccurate viral prediction leads to overestimated diversity of the archaeal virome in the human gut
inferred← citeshttps://doi.org/10.1038/s41598-017-01708-1openalex-snapshot
Evolution of sex-dependent mtDNA transmission in freshwater mussels (Bivalvia: Unionida)
inferred← citeshttps://doi.org/10.1038/s41598-017-02076-6openalex-snapshot
The complete chloroplast genome sequence of tung tree (Vernicia fordii): Organization and phylogenetic relationships with other angiosperms
inferred← citeshttps://doi.org/10.1038/s41598-017-02083-7openalex-snapshot
Chloroplast Genomic Resource of Paris for Species Discrimination
inferred← citeshttps://doi.org/10.1038/s41598-017-10409-8openalex-snapshot
Complete Chloroplast Genome Sequence of Decaisnea insignis: Genome Organization, Genomic Resources and Comparative Analysis
inferred← citeshttps://doi.org/10.1038/s41598-017-12026-xopenalex-snapshot
Development of chloroplast genome resources for peanut (Arachis hypogaea L.) and other species of Arachis
inferred← citeshttps://doi.org/10.1038/s41598-018-20189-4openalex-snapshot
Chloroplast genomes of Byrsonima species (Malpighiaceae): comparative analysis and screening of high divergence sequences
inferred← citeshttps://doi.org/10.1038/s41598-018-27453-7openalex-snapshot
Dynamic evolution and phylogenomic analysis of the chloroplast genome in Schisandraceae
inferred← citeshttps://doi.org/10.1038/s41598-019-45520-5openalex-snapshot
Discovery and characterization of functional modules associated with body weight in broilers
inferred← citeshttps://doi.org/10.1038/s41598-020-57975-yopenalex-snapshot
Unorthodox features in two venerid bivalves with doubly uniparental inheritance of mitochondria
inferred← citeshttps://doi.org/10.1038/s41598-020-65084-zopenalex-snapshot
Clues of in vivo nuclear gene regulation by mitochondrial short non-coding RNAs
inferred← citeshttps://doi.org/10.1038/s41598-020-73790-xopenalex-snapshot
Mitochondrial genome sequencing and phylogeny of Haemagogus albomaculatus, Haemagogus leucocelaenus, Haemagogus spegazzinii, and Haemagogus tropicalis (Diptera: Culicidae)
inferred← citeshttps://doi.org/10.1038/s41598-021-91224-0openalex-snapshot
The queen conch mitogenome: intra- and interspecific mitogenomic variability in Strombidae and phylogenetic considerations within the Hypsogastropoda
inferred← citeshttps://doi.org/10.1038/s41598-021-94649-9openalex-snapshot
Characterizing chloroplast genomes and inferring maternal divergence of the Triticum–Aegilops complex
inferred← citeshttps://doi.org/10.1038/s41598-022-21457-0openalex-snapshot
The complete mitochondrial genome of the woodwasp Euxiphydria potanini (Hymenoptera, Xiphydrioidea) and phylogenetic implications for symphytans
inferred← citeshttps://doi.org/10.1038/s41598-023-40746-wopenalex-snapshot
Ancient DNA re-opens the question of the phylogenetic position of the Sardinian pika Prolagus sardus (Wagner, 1829), an extinct lagomorph
inferred← citeshttps://doi.org/10.1038/s41598-024-63584-wopenalex-snapshot
Evolutionary and phylogenetic insights from the mitochondrial genomic analysis of Diceraeus melacanthus and D. furcatus (Hemiptera: Pentatomidae)
inferred← citeshttps://doi.org/10.1038/s41598-024-64791-1openalex-snapshot
Complete mitogenome and intra-family comparative mitogenomics showed distinct position of Pama Croaker Otolithoides pama
inferred← citeshttps://doi.org/10.1038/s41598-026-38021-9openalex-snapshot
The first mitochondrial genome for Sterictiphorinae (Hymenoptera: Argidae) and insights into argid phylogeny
inferred← citeshttps://doi.org/10.1038/srep30158openalex-snapshot
The mitochondrial genome map of Nelumbo nucifera reveals ancient evolutionary features
inferred← citeshttps://doi.org/10.1073/pnas.1816822116openalex-snapshot
Novel genetic code and record-setting AT-richness in the highly reduced plastid genome of the holoparasitic plant Balanophora
inferred← citeshttps://doi.org/10.1080/00222933.2025.2492848openalex-snapshot
Description of the complete mitochondrial genome of the Van Gelder’s bat Bauerus dubiaquercus (Chiroptera: Vespertilionidae)
inferred← citeshttps://doi.org/10.1080/13416979.2018.1512395openalex-snapshot
Whole chloroplast genome sequences of the Japanese hemlocks, Tsuga diversifolia and T. sieboldii, and development of chloroplast microsatellite markers applicable to East Asian Tsuga
inferred← citeshttps://doi.org/10.1080/13416979.2018.1518649openalex-snapshot
Comparative chloroplast genomics of series Sakawanum in genus Asarum (Aristolochiaceae) to develop single nucleotide polymorphisms (SNPs) and simple sequence repeat (SSR) markers
inferred← citeshttps://doi.org/10.1080/13416979.2020.1767268openalex-snapshot
Phylogenetic origin of Magnolia pseudokobus (Magnoliaceae), a rare Magnolia extinct in the wild, revealed by chloroplast genome sequencing, genome-wide SNP genotyping and microsatellite analysis
inferred← citeshttps://doi.org/10.1080/21505594.2018.1486140openalex-snapshot
Antibiotic exposure elicits the emergence of colistin- and carbapenem-resistant Escherichia coli coharboring MCR-1 and NDM-5 in a patient
inferred← citeshttps://doi.org/10.1080/23802359.2018.1450666openalex-snapshot
The chloroplast genome sequence of Magnolia kobus DC. (Magnoliaceae)
inferred← citeshttps://doi.org/10.1080/23802359.2019.1692723openalex-snapshot
Characterization of the complete chloroplast genome of the Pistacia vera L
inferred← citeshttps://doi.org/10.1080/23802359.2020.1765206openalex-snapshot
Complete mitochondrial genome of gray black carp ( Mylopharyngodon piceus )
inferred← citeshttps://doi.org/10.1080/23802359.2020.1866464openalex-snapshot
The complete chloroplast genome of Crataegus hupehensis Sarg. (Rosaceae), a medicinal and edible plant in China
inferred← citeshttps://doi.org/10.1080/23802359.2021.1944380openalex-snapshot
The complete chloroplast genome of Aconitum scaposum
inferred← citeshttps://doi.org/10.1080/23802359.2021.1994896openalex-snapshot
The complete chloroplast genome of Crataegus bretschneideri Schneid. (Rosaceae)
inferred← citeshttps://doi.org/10.1080/23802359.2023.2169573openalex-snapshot
The complete mitochondrial genome of Nycteribia parvula Speiser, 1901 (Diptera, Nycteribiidae)
inferred← citeshttps://doi.org/10.1080/23802359.2023.2290127openalex-snapshot
The complete mitochondrial genome of Nycteribia formosana (Diptera, Nycteribiidae)
inferred← citeshttps://doi.org/10.1080/23802359.2024.2346603openalex-snapshot
The complete mitochondrial genome of the sand bubbler crab Scopimera longidactyla Shen 1932 (Decapoda: Dotillidae) and its phylogenetic analysis
inferred← citeshttps://doi.org/10.1080/23802359.2024.2368727openalex-snapshot
Complete mitochondrial genome of the European common barnacle Perforatus perforatus Bruguière, 1789 (balanomorpha: balanidae)
inferred← citeshttps://doi.org/10.1080/23802359.2024.2399925openalex-snapshot
Characterization and phylogenetic analysis of the complete mitochondrial genome of the red alga, Gracilaria eucheumatoides Harvey 1860 (Gracilariales: Gracilariaceae) from Vietnam
inferred← citeshttps://doi.org/10.1080/23802359.2025.2559710openalex-snapshot
Characterization and phylogenetic analysis of the complete mitochondrial genome of Benthodytes gosarsi Gebruk 2008 (echinodermata: holothuroidea: elasipodida) from deep-sea environments
inferred← citeshttps://doi.org/10.1080/23802359.2026.2711178openalex-snapshot
Complete mitochondrial genome of Meganola major (Hampson, 1891) (Lepidoptera: Nolidae)
inferred← citeshttps://doi.org/10.1080/24701394.2026.2695112openalex-snapshot
Characterization of the complete mitochondrial genome of the common Mexican mustached bat Pteronotus mexicanus
inferred← citeshttps://doi.org/10.1080/24701394.2026.2695116openalex-snapshot
The mitochondrial genome of the sun anemone shrimp Periclimenes rathbunae (Decapoda: Caridea: Palaemonidae)
inferred← citeshttps://doi.org/10.1093/bioinformatics/btn588openalex-snapshot
MINOMICS: visualizing prokaryote transcriptomics and proteomics data in a genomic context
inferred← citeshttps://doi.org/10.1093/bioinformatics/btv249openalex-snapshot
CiVi: circular genome visualization with unique features to analyze sequence elements
inferred← citeshttps://doi.org/10.1093/botlinnean/boz020openalex-snapshot
Dynamism in plastome structure observed across the phylogenetic tree of ferns
inferred← citeshttps://doi.org/10.1093/dnares/dsp008openalex-snapshot
Complete Chloroplast Genome Sequence of a Major Allogamous Forage Species, Perennial Ryegrass (Lolium perenne L.)
inferred← citeshttps://doi.org/10.1093/dnares/dsr002openalex-snapshot
The Complete Chloroplast Genome of 17 Individuals of Pest Species Jacobaea vulgaris: SNPs, Microsatellites and Barcoding Markers for Population and Phylogenetic Studies
inferred← citeshttps://doi.org/10.1093/g3journal/jkad046openalex-snapshot
The genome of the soybean gall midge ( Resseliella maxima )
inferred← citeshttps://doi.org/10.1093/gbe/evt042openalex-snapshot
The Complete Chloroplast Genome Sequence of Cephalotaxus oliveri (Cephalotaxaceae): Evolutionary Comparison of Cephalotaxus Chloroplast DNAs and Insights into the Loss of Inverted Repeat Copies in Gymnosperms
inferred← citeshttps://doi.org/10.1093/gbe/evu138openalex-snapshot
A trnI_CAU Triplication Event in the Complete Chloroplast Genome of Paris verticillata M.Bieb. (Melanthiaceae, Liliales)
inferred← citeshttps://doi.org/10.1093/gbe/evv019openalex-snapshot
Exploring the Limits for Reduction of Plastid Genomes: A Case Study of the Mycoheterotrophic Orchids Epipogium aphyllum and Epipogium roseum
inferred← citeshttps://doi.org/10.1093/gbe/evw027openalex-snapshot
A Comparative Analysis of Mitochondrial Genomes in Eustigmatophyte Algae
inferred← citeshttps://doi.org/10.1093/gbe/evx086openalex-snapshot
Mitochondrial Genome Evolution and a Novel RNA Editing System in Deep-Branching Heteroloboseids
inferred← citeshttps://doi.org/10.1093/gbe/evy268openalex-snapshot
Plastid Genomes from Diverse Glaucophyte Genera Reveal a Largely Conserved Gene Content and Limited Architectural Diversity
inferred← citeshttps://doi.org/10.1093/gigascience/giac026openalex-snapshot
A high-quality, long-read genome assembly of the endangered ring-tailed lemur ( Lemur catta )
inferred← citeshttps://doi.org/10.1093/jcbiol/ruac003openalex-snapshot
The complete mitochondrial genome of the spot prawn,Pandalus platycerosBrandt in von Middendorf, 1851 (Decapoda: Caridea: Pandalidae), assembled from linked-reads sequencing
inferred← citeshttps://doi.org/10.1093/jcbiol/ruac004openalex-snapshot
Characterization of the complete mitochondrial genome of the Atlantic seabob shrimpXiphopenaeus kroyeriHeller, 1862 (Decapoda: Dendrobranchiata: Penaeidae), with insights into the phylogeny of Penaeidae
inferred← citeshttps://doi.org/10.1093/jcbiol/ruac007openalex-snapshot
The complete mitochondrial genome of the pink shrimpFarfantepenaeus duorarum(Burkenroad, 1939) (Decapoda: Dendrobranchiata: Penaeidae)
inferred← citeshttps://doi.org/10.1093/jcbiol/ruac012openalex-snapshot
An introduction to the Special Section on Crustacean Mitochondrial Genomics: Improving the assembly, annotation, and characterization of mitochondrial genomes using user-friendly and open-access bioinformatics tools, with decapod crustaceans as an example
inferred← citeshttps://doi.org/10.1093/jcbiol/ruac055openalex-snapshot
Characterization of the complete mitochondrial genome of the striped soldier shrimp, Plesionika edwardsii (Brandt, 1851) (Crustacea: Decapoda: Pandalidae), and comparison with other species of Caridea
inferred← citeshttps://doi.org/10.1093/jmammal/gyab117openalex-snapshot
A genomic portrait of Sturnira parvidens : mitochondrial chromosome, repetitive elements, and microsatellite discovery
inferred← citeshttps://doi.org/10.1093/molbev/msu252openalex-snapshot
Investigating the Path of Plastid Genome Degradation in an Early-Transitional Clade of Heterotrophic Orchids, and Implications for Heterotrophic Angiosperms
inferred← citeshttps://doi.org/10.1093/mp/sst120openalex-snapshot
Chromosome Scale Genome Assembly and Transcriptome Profiling of Nannochloropsis gaditana in Nitrogen Depletion
inferred← citeshttps://doi.org/10.1093/nar/gkz238openalex-snapshot
OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaa153openalex-snapshot
Mitogenomic phylogeny and fossil-calibrated mutation rates for all F- and M-type mtDNA genes of the largest freshwater mussel family, the Unionidae (Bivalvia)
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlz136openalex-snapshot
Phylogeny of European Anodontini (Bivalvia: Unionidae) with a redescription of Anodonta exulcerata
inferred← citeshttps://doi.org/10.1099/jgv.0.001715openalex-snapshot
ICTV Virus Taxonomy Profile: Chaseviridae 2022
inferred← citeshttps://doi.org/10.1099/mgen.0.000254openalex-snapshot
Transcriptomic analysis of Rhizobium leguminosarum bacteroids in determinate and indeterminate nodules
inferred← citeshttps://doi.org/10.1101/2024.07.10.602838openalex-snapshot
Environmental differences impact Acinetobacter baumannii phage isolation and infectivity
inferred← citeshttps://doi.org/10.1101/2024.11.05.622192openalex-snapshot
GenomicSign: A computational method to discover unique, specific, and amplifiable signatures of target genomic sequences
inferred← citeshttps://doi.org/10.1109/comcomap.2012.6154863openalex-snapshot
Development and implementation of CARAS algorithm for automatic annotation, visualization, and GenBank submission of chloroplast genome sequences
inferred← citeshttps://doi.org/10.1111/1755-0998.12276openalex-snapshot
Development of genomic resources for N othofagus species using next‐generation sequencing data
inferred← citeshttps://doi.org/10.1111/1755-0998.12457openalex-snapshot
Development of chloroplast genomic resources for C ynara
inferred← citeshttps://doi.org/10.1111/1755-0998.12487openalex-snapshot
Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae)
inferred← citeshttps://doi.org/10.1111/1755-0998.13952openalex-snapshot
Plant mitochondrial genome map (PMGmap): A software tool for the comprehensive visualization of coding, noncoding and genome features of plant mitochondrial genomes
inferred← citeshttps://doi.org/10.1111/1755-0998.14010openalex-snapshot
High‐quality genome assemblies for nine non‐model North American insect species representing six orders (Insecta: Coleoptera, Diptera, Hemiptera, Hymenoptera, Lepidoptera, Neuroptera)
inferred← citeshttps://doi.org/10.1111/eva.13238openalex-snapshot
Population genomics and phylogeography of the boll weevil,Anthonomus grandisBoheman (Coleoptera: Curculionidae), in the United States, northern Mexico, and Argentina
inferred← citeshttps://doi.org/10.1111/j.1759-6831.2012.00224.xopenalex-snapshot
Nelumbonaceae: Systematic position and species diversification revealed by the complete chloroplast genome
inferred← citeshttps://doi.org/10.1111/jeu.12334openalex-snapshot
The Chloroplast Genome of Euglena mutabilis—Cluster Arrangement, Intron Analysis, and Intrageneric Trends
inferred← citeshttps://doi.org/10.1111/jeu.12371openalex-snapshot
Mitochondrial Genome of Prasinophyte Alga Pyramimonas parkeae
inferred← citeshttps://doi.org/10.1111/jpy.12403openalex-snapshot
The chloroplast genome of Phacus orbicularis (Euglenophyceae): an initial datum point for the phacaceae
inferred← citeshttps://doi.org/10.1111/jpy.12824openalex-snapshot
The complete chloroplast and mitochondrial genomes of the diatomNitzschia palea(Bacillariophyceae) demonstrate high sequence similarity to the endosymbiont organelles of the dinotomDurinskia baltica
inferred← citeshttps://doi.org/10.1111/jse.12482openalex-snapshot
Plastome phylogenomic analysis of Torreya (Taxaceae)
inferred← citeshttps://doi.org/10.1111/mec.15159openalex-snapshot
The association between mitochondrial genetic variation and reduced colony fitness in an invasive wasp
inferred← citeshttps://doi.org/10.1111/njb.02072openalex-snapshot
The complete plastid genome sequence of Trichomanes trollii (Hymenophyllaceae)
inferred← citeshttps://doi.org/10.1111/nph.12931openalex-snapshot
The chloroplast view of the evolution of polyploid wheat
inferred← citeshttps://doi.org/10.1111/pbi.12179openalex-snapshot
Evolutionary and biotechnology implications of plastid genome variation in the inverted‐repeat‐lacking clade of legumes
inferred← citeshttps://doi.org/10.1111/tpj.13789openalex-snapshot
Genome sequences of Chlorella sorokiniana UTEX 1602 and Micractinium conductrix SAG 241.80: implications to maltose excretion by a green alga
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