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Bayesian evolutionary model testing in the phylogenomics era: matching model complexity with computational efficiency
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
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Maximum-likelihood models for combined analyses of multiple sequence data
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Among-site rate variation and its impact on phylogenetic analyses
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Mammalian Protein Metabolism
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Evolution of Protein Molecules
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The conditioned reconstructed process
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Phylogenomics: the beginning of incongruence?
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Bayesian Phylogenetic Analysis of Combined Data
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Computing Bayes Factors Using Thermodynamic Integration
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Accounting for Gene Rate Heterogeneity in Phylogenetic Inference
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Many-core algorithms for statistical phylogenetics
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A counting renaissance: combining stochastic mapping and empirical Bayes to quickly detect amino acid sites under positive selection
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Likelihood Models for Detecting Positively Selected Amino Acid Sites and Applications to the HIV-1 Envelope Gene
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Likelihood Analysis of Asymmetrical Mutation Bias Gradients in Vertebrate Mitochondrial Genomes
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Site-to-Site Variation of Synonymous Substitution Rates
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Choosing Appropriate Substitution Models for the Phylogenetic Analysis of Protein-Coding Sequences
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Strong Variations of Mitochondrial Mutation Rate across Mammals--the Longevity Hypothesis
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Impact of CCR5delta32 Host Genetic Background and Disease Progression on HIV-1 Intrahost Evolutionary Processes: Efficient Hypothesis Testing through Hierarchical Phylogenetic Models
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Evolutionary Models Accounting for Layers of Selection in Protein-Coding Genes and their Impact on the Inference of Positive Selection
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Statistics and Truth in Phylogenomics
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Accurate Model Selection of Relaxed Molecular Clocks in Bayesian Phylogenetics
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Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
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Asymmetrical directional mutation pressure in the mitochondrial genome of mammals
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A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome.
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A codon-based model of nucleotide substitution for protein-coding DNA sequences.
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Partitioning and Combining Data in Phylogenetic Analysis
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Improving Marginal Likelihood Estimation for Bayesian Phylogenetic Model Selection
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BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
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Graph hierarchies for phylogeography
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Marginal Likelihood Estimation via Power Posteriors
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Approximate Bayesian Inference with the Weighted Likelihood Bootstrap
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Phylogenomics: Intersection of Evolution and Genomics
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Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution
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Context-dependent codon partition models provide significant increases in model fit in atpB and rbcL protein-coding genes
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Bayesian random local clocks, or one rate to rule them all
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Relaxed Phylogenetics and Dating with Confidence
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Bayesian Comparisons of Codon Substitution Models
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Peer Review #1 of "Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.12438v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.12438v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.12438v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics (v0.2)"
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Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics
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