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Building deep learning models for evidence classification from the open access biomedical literature

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.jbi.2018.09.008openalex-snapshot

A comparison of word embeddings for the biomedical natural language processing

inferredcites →https://doi.org/10.1093/database/bas020openalex-snapshot

Text mining for the biocuration workflow

inferredcites →https://doi.org/10.1093/database/baw122openalex-snapshot

Automated detection of discourse segment and experimental types from the text of cancer pathway results sections

inferredcites →https://doi.org/10.1145/344250.344252openalex-snapshot

The text REtrieval conference (TREC)

inferredcites →https://doi.org/10.1162/tacl_a_00051openalex-snapshot

Enriching Word Vectors with Subword Information

inferredcites →https://doi.org/10.1186/1471-2105-12-351openalex-snapshot

Knowledge engineering tools for reasoning with scientific observations and interpretations: a neural connectivity use case

inferredcites →https://doi.org/10.1186/1747-5333-1-4openalex-snapshot

The TREC 2004 genomics track categorization task: classifying full text biomedical documents.

inferredcites →https://doi.org/10.1186/s13326-018-0181-1openalex-snapshot

Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature

inferredcites →https://doi.org/10.1371/journal.pcbi.1006390openalex-snapshot

Scaling up data curation using deep learning: An application to literature triage in genomic variation resources

inferredcites →https://doi.org/10.18653/v1/n18-1202openalex-snapshot

Deep Contextualized Word Representations

inferredcites →https://doi.org/10.18653/v1/w18-2311openalex-snapshot

Biomedical Event Extraction Using Convolutional Neural Networks and Dependency Parsing

inferredcites →https://doi.org/10.4230/lipics.cosit.2022.18openalex-snapshot

AI-Assisted Pipeline for Dynamic Generation of Trustworthy Health Supplement Content at Scale

inferredcites →https://doi.org/10.48550/arxiv.1409.0473openalex-snapshot

Neural Machine Translation by Jointly Learning to Align and Translate

inferredcites →https://doi.org/10.48550/arxiv.1610.03759openalex-snapshot

Language Models with Pre-Trained (GloVe) Word Embeddings

inferredcites →https://doi.org/10.5281/zenodo.1315020openalex-snapshot

Method Classification Of Open Access Intact Molecular Interaction Data.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-3-030-86258-9_12openalex-snapshot

BioTMPy: A Deep Learning-Based Tool to Classify Biomedical Literature

inferred← citeshttps://doi.org/10.1016/b978-0-323-90277-9.00016-xopenalex-snapshot

Clinical applications of deep learning in neurology and its enhancements with future predictions

inferred← citeshttps://doi.org/10.1016/j.bspc.2022.104035openalex-snapshot

Detecting the modality of a medical image using visual and textual features

inferred← citeshttps://doi.org/10.1016/j.csbj.2022.08.041openalex-snapshot

YTLR: Extracting yeast transcription factor-gene associations from the literature using automated literature readers

inferred← citeshttps://doi.org/10.1038/s41467-020-19942-zopenalex-snapshot

Towards a unified open access dataset of molecular interactions

inferred← citeshttps://doi.org/10.1042/etls20190003openalex-snapshot

New advances in extracting and learning from protein–protein interactions within unstructured biomedical text data

inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa837openalex-snapshot

BERTMeSH: deep contextual representation learning for large-scale high-performance MeSH indexing with full text

inferred← citeshttps://doi.org/10.1093/bioinformatics/btab331openalex-snapshot

Utilizing image and caption information for biomedical document classification

inferred← citeshttps://doi.org/10.1093/database/baaa024openalex-snapshot

Integrating image caption information into biomedical document classification in support of biocuration

inferred← citeshttps://doi.org/10.1093/database/baaa026openalex-snapshot

UPCLASS: a deep learning-based classifier for UniProtKB entry publications

inferred← citeshttps://doi.org/10.1093/database/baae049openalex-snapshot

DMLS: an automated pipeline to extract the Drosophila modular transcription regulators and targets from massive literature articles

inferred← citeshttps://doi.org/10.1093/nar/gkaa328openalex-snapshot

SIB Literature Services: RESTful customizable search engines in biomedical literature, enriched with automatically mapped biomedical concepts

inferred← citeshttps://doi.org/10.1101/842062openalex-snapshot

UPCLASS: a Deep Learning-based Classifier for UniProtKB Entry Publications

inferred← citeshttps://doi.org/10.1109/bibm52615.2021.9669898openalex-snapshot

ANIMO: Annotation of Biomed Image Modalities

inferred← citeshttps://doi.org/10.1109/bibm55620.2022.9994867openalex-snapshot

BioMDSE: A Multimodal Deep Learning-Based Search Engine Framework for Biofilm Documents Classifications

inferred← citeshttps://doi.org/10.1109/bigdata62323.2024.10825400openalex-snapshot

Improving CLIP for Biomedical Retrieval: A Multi-Margin Contrastive Loss Approach

inferred← citeshttps://doi.org/10.1109/i2ct57861.2023.10126262openalex-snapshot

Transfer Learning Approach to Multilabel Biomedical Literature Classification using Transformer Models

inferred← citeshttps://doi.org/10.1109/icitee49829.2020.9271752openalex-snapshot

Domain-Specific Contextualized Embedding: A Systematic Literature Review

inferred← citeshttps://doi.org/10.1109/iiaiaai55812.2022.00038openalex-snapshot

Analyzing the Structure of U.S. Patents Using Patent Families

inferred← citeshttps://doi.org/10.1111/cgf.15261openalex-snapshot

BI‐LAVA: Biocuration With Hierarchical Image Labelling Through Active Learning and Visual Analytics

inferred← citeshttps://doi.org/10.1145/3400286.3418259openalex-snapshot

Semantic Classification of EMF-related Literature using Deep Learning Models with Attention Mechanism

inferred← citeshttps://doi.org/10.1145/3477127.3477131openalex-snapshot

Deep learning-based semantic classification of EMF-related scientific literature

inferred← citeshttps://doi.org/10.1145/3530043.3530047openalex-snapshot

Design and implementation of information extraction system for scientific literature using fine-tuned deep learning models

inferred← citeshttps://doi.org/10.1186/s12859-024-05730-9openalex-snapshot

MetaTron: advancing biomedical annotation empowering relation annotation and collaboration

inferred← citeshttps://doi.org/10.1186/s40708-023-00202-xopenalex-snapshot

Automatic identification of scientific publications describing digital reconstructions of neural morphology

inferred← citeshttps://doi.org/10.1609/aaai.v35i16.17657openalex-snapshot

MELINDA: A Multimodal Dataset for Biomedical Experiment Method Classification

inferred← citeshttps://doi.org/10.18653/v1/2021.eacl-main.218openalex-snapshot

Scientific Discourse Tagging for Evidence Extraction

inferred← citeshttps://doi.org/10.3390/electronics11142229openalex-snapshot

Research on Medical Text Classification Based on Improved Capsule Network

inferred← citeshttps://doi.org/10.3390/electronics9081253openalex-snapshot

Deep Learning Based Biomedical Literature Classification Using Criteria of Scientific Rigor

inferred← citeshttps://doi.org/10.5220/0010884500003123openalex-snapshot

DeIDNER Model: A Neural Network Named Entity Recognition Model for Use in the De-identification of Clinical Notes

inferred← citeshttps://doi.org/10.9728/dcs.2021.22.5.817openalex-snapshot

Implementation of Literature Database for Human Health Risk Assessment of Electromagnetic Fields

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