On the public citation graph
UPCLASS: a deep learning-based classifier for UniProtKB entry publications
0 signed · 37 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-3-319-21569-3openalex-snapshot
New Horizons for a Data-Driven Economy
inferredcites →https://doi.org/10.1016/j.jbi.2017.05.002openalex-snapshot
Character-level neural network for biomedical named entity recognition
inferredcites →https://doi.org/10.1093/bib/bbv024openalex-snapshot
Community challenges in biomedical text mining over 10 years: success, failure and the future
inferredcites →https://doi.org/10.1093/bioinformatics/btx439openalex-snapshot
On expert curation and scalability: UniProtKB/Swiss-Prot as a case study
inferredcites →https://doi.org/10.1093/database/bau033openalex-snapshot
tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles
inferredcites →https://doi.org/10.1093/database/baw161openalex-snapshot
Pressing needs of biomedical text mining in biocuration and beyond: opportunities and challenges
inferredcites →https://doi.org/10.1093/database/bax081openalex-snapshot
eGenPub, a text mining system for extending computationally mapped bibliography for UniProt Knowledgebase by capturing centrality
inferredcites →https://doi.org/10.1093/database/bax083openalex-snapshot
Improving average ranking precision in user searches for biomedical research datasets
inferredcites →https://doi.org/10.1093/database/baz034openalex-snapshot
Building deep learning models for evidence classification from the open access biomedical literature
inferredcites →https://doi.org/10.1093/database/baz045openalex-snapshot
An effective biomedical document classification scheme in support of biocuration: addressing class imbalance
inferredcites →https://doi.org/10.1093/jamia/ocz085openalex-snapshot
ML-Net: multi-label classification of biomedical texts with deep neural networks
inferredcites →https://doi.org/10.1093/nar/gky1049openalex-snapshot
UniProt: a worldwide hub of protein knowledge
inferredcites →https://doi.org/10.1145/1007730.1007735openalex-snapshot
A study of the behavior of several methods for balancing machine learning training data
inferredcites →https://doi.org/10.1186/s12859-018-2021-9openalex-snapshot
LocText: relation extraction of protein localizations to assist database curation
inferredcites →https://doi.org/10.1186/s12859-018-2103-8openalex-snapshot
Textpresso Central: a customizable platform for searching, text mining, viewing, and curating biomedical literature
inferredcites →https://doi.org/10.1186/s12915-016-0276-zopenalex-snapshot
Model organism databases: essential resources that need the support of both funders and users
inferredcites →https://doi.org/10.1371/journal.pbio.2002846openalex-snapshot
Biocuration: Distilling data into knowledge
inferredcites →https://doi.org/10.1371/journal.pcbi.1006390openalex-snapshot
Scaling up data curation using deep learning: An application to literature triage in genomic variation resources
inferredcites →https://doi.org/10.1371/journal.pone.0062874openalex-snapshot
Assisted Knowledge Discovery for the Maintenance of Clinical Guidelines
inferredcites →https://doi.org/10.18653/v1/n18-1openalex-snapshot
Proceedings of the 2018 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, Volume 1 (Long Papers)
inferredcites →https://doi.org/10.18653/v1/p16-1035openalex-snapshot
Query Expansion with Locally-Trained Word Embeddings
inferredcites →https://doi.org/10.3115/v1/d14-1162openalex-snapshot
Glove: Global Vectors for Word Representation
inferredcites →https://doi.org/10.4230/lipics.cosit.2022.18openalex-snapshot
AI-Assisted Pipeline for Dynamic Generation of Trustworthy Health Supplement Content at Scale
inferredcites →https://doi.org/10.48550/arxiv.1707.02919openalex-snapshot
A Brief Survey of Text Mining: Classification, Clustering and Extraction Techniques
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/s10115-025-02565-5openalex-snapshot
Imbalance class problem : an analytical mapping using spreadsheet, VOSviewer, and large language models
inferred← citeshttps://doi.org/10.1016/j.icte.2023.08.006openalex-snapshot
Research category classification of scientific articles on human health risks of electromagnetic fields using pre-trained BERT
inferred← citeshttps://doi.org/10.1038/s41598-020-80441-8openalex-snapshot
Identifying protein subcellular localisation in scientific literature using bidirectional deep recurrent neural network
inferred← citeshttps://doi.org/10.1093/database/baaf063openalex-snapshot
Characterization and automated classification of sentences in the biomedical literature: a case study for biocuration of gene expression and protein kinase activity
inferred← citeshttps://doi.org/10.1101/2023.01.18.524571openalex-snapshot
Ensemble of deep learning language models to support the creation of living systematic reviews for the COVID-19 literature
inferred← citeshttps://doi.org/10.1109/jbhi.2024.3520579openalex-snapshot
PubLabeler: Enhancing Automatic Classification of Publications in UniProtKB Using Protein Textual Description and PubMedBERT
inferred← citeshttps://doi.org/10.1186/s13643-023-02247-9openalex-snapshot
Ensemble of deep learning language models to support the creation of living systematic reviews for the COVID-19 literature
inferred← citeshttps://doi.org/10.18653/v1/2023.clinicalnlp-1.57openalex-snapshot
DS4DH at MEDIQA-Chat 2023: Leveraging SVM and GPT-3 Prompt Engineering for Medical Dialogue Classification and Summarization
inferred← citeshttps://doi.org/10.2174/0122133372417686251205070259openalex-snapshot
Characterization and Application of Alcohol Dehydrogenase in the Biotransformation of Veratryl Alcohol
inferred← citeshttps://doi.org/10.25004/ijpsdr.2023.150209openalex-snapshot
Protein Interaction Network Analysis of β-catenin to Map its Crucial Interacting Genes using Systems Biology Approach
inferred← citeshttps://doi.org/10.9728/dcs.2021.22.5.817openalex-snapshot
Implementation of Literature Database for Human Health Risk Assessment of Electromagnetic Fields
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.