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Evolutionary Genetics of Hypoxia Tolerance in Cetaceans during Diving

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Angiotensin II Receptors

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Accelerated Evolutionary Rate of the Myoglobin Gene in Long-Diving Whales

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Hemoglobin Okayama [β‐2 (NA 2) His → Gln]: A new ‘silent’ hemoglobin variant with substituted amino acid residue at the 2,3‐diphosphoglycerate binding site

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Respiratory adaptations in diving mammals

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Angiotensin II receptors

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Hemoglobin–oxygen-affinity and acid-base properties of blood from the fossorial mole-rat, Cryptomys hottentotus pretoriae

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Nuclear localization drives α1-adrenergic receptor oligomerization and signaling in cardiac myocytes

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Neuroglobin of seals and whales: Evidence for a divergent role in the diving brain

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Molecular evolution tracks macroevolutionary transitions in Cetacea

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Distinct subdomains of human endothelin receptors determine their selectivity to endothelinA-selective antagonist and endothelinB-selective agonists.

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A vertebrate globin expressed in the brain

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Genome-wide signatures of convergent evolution in echolocating mammals

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The yak genome and adaptation to life at high altitude

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Plasma Endothelin Immunoreactivity in Liver Disease and the Hepatorenal Syndrome

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A brief history of hemoglobins: plant, animal, protist, and bacteria.

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Primer Premier 5

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MODELTEST: testing the model of DNA substitution.

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TreeSAAP: Selection on Amino Acid Properties using phylogenetic trees

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MrBayes 3: Bayesian phylogenetic inference under mixed models

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ProtTest: selection of best-fit models of protein evolution

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Datamonkey: rapid detection of selective pressure on individual sites of codon alignments

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Pathophysiology of cardiovascular dysfunction in sepsis

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Genomic Organization and Differential Signature of Positive Selection in the Alpha and Beta Globin Gene Clusters in Two Cetacean Species

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Massive Losses of Taste Receptor Genes in Toothed and Baleen Whales

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Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection

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PAML 4: Phylogenetic Analysis by Maximum Likelihood

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Evolution of CRISPs Associated with Toxicoferan-Reptilian Venom and Mammalian Reproduction

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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

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NCBI BLAST: a better web interface

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Pervasive Adaptive Evolution in Mammalian Fertilization Proteins

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Detection of convergent and parallel evolution at the amino acid sequence level

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Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution

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Pharmacology of Endothelins in Vascular Circuits of Normal or Heterozygous Endothelin-A or Endothelin-B Knockout Transgenic Mice

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The Endothelin Family: An Overview

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Dolphin genome provides evidence for adaptive evolution of nervous system genes and a molecular rate slowdown

inferredcites →https://doi.org/10.1098/rspb.2012.1729openalex-snapshot

Positive selection at the ASPM gene coincides with brain size enlargements in cetaceans

inferredcites →https://doi.org/10.1111/j.1365-2656.2006.01101.xopenalex-snapshot

Deep‐diving foraging behaviour of sperm whales ( Physeter macrocephalus )

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SPERM WHALES TAGGED WITH TRANSPONDERS AND TRACKED UNDERWATER BY SONAR

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HABITAT USE AND PREFERENCES OF INDO‐PACIFIC HUMPBACK DOLPHINS SOUSA CHINENSIS IN ALGOA BAY, SOUTH AFRICA

inferredcites →https://doi.org/10.1113/ep085139openalex-snapshot

Interactions between local dilator and sympathetic vasoconstrictor influences in skeletal muscle in acute and chronic hypoxia

inferredcites →https://doi.org/10.1126/science.1234192openalex-snapshot

Evolution of Mammalian Diving Capacity Traced by Myoglobin Net Surface Charge

inferredcites →https://doi.org/10.1126/science.151.3709.456openalex-snapshot

Blood Oxygen and Ecology of Porpoises of Three Genera

inferredcites →https://doi.org/10.1126/science.153.3739.941openalex-snapshot

Cardiovascular Defense against Asphyxia

inferredcites →https://doi.org/10.1146/annurev.ph.43.030181.002015openalex-snapshot

Physiology of Diving in Marine Mammals

inferredcites →https://doi.org/10.1146/annurev.pharmtox.41.1.851openalex-snapshot

Endothelin System: The Double-Edged Sword in Health and Disease

inferredcites →https://doi.org/10.1146/annurev.physiol.69.031905.163111openalex-snapshot

Hypoxia Tolerance in Mammals and Birds: From the Wilderness to the Clinic

inferredcites →https://doi.org/10.1152/physiol.00020.2013openalex-snapshot

The Mammalian Diving Response: An Enigmatic Reflex to Preserve Life?

inferredcites →https://doi.org/10.1152/physrev.1997.77.3.837openalex-snapshot

Physiology of diving of birds and mammals

inferredcites →https://doi.org/10.1161/01.hyp.35.1.173openalex-snapshot

Ion Channels and Vascular Tone

inferredcites →https://doi.org/10.1186/1471-2105-9-40openalex-snapshot

I-TASSER server for protein 3D structure prediction

inferredcites →https://doi.org/10.1186/1471-2148-12-39openalex-snapshot

Adaptive evolution and functional constraint at TLR4 during the secondary aquatic adaptation and diversification of cetaceans

inferredcites →https://doi.org/10.1186/1471-2148-13-189openalex-snapshot

Adaptive evolution of the osmoregulation-related genes in cetaceans during secondary aquatic adaptation

inferredcites →https://doi.org/10.1186/1471-2148-7-241openalex-snapshot

OrthoMaM: A database of orthologous genomic markers for placental mammal phylogenetics

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Science review: Vasopressin and the cardiovascular system part 1--receptor physiology.

inferredcites →https://doi.org/10.1186/s12862-014-0218-8openalex-snapshot

The loss of taste genes in cetaceans

inferredcites →https://doi.org/10.1242/jeb.01172openalex-snapshot

Myoglobin: an essential hemoprotein in striated muscle

inferredcites →https://doi.org/10.1242/jeb.048181openalex-snapshot

Phenotypic plasticity and genetic adaptation to high-altitude hypoxia in vertebrates

inferredcites →https://doi.org/10.1242/jeb.073726openalex-snapshot

Functional properties of myoglobins from five whale species with different diving capacities

inferredcites →https://doi.org/10.1371/journal.pcbi.1002929openalex-snapshot

Positively Selected Sites in Cetacean Myoglobins Contribute to Protein Stability

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Apnoeic Heart Rate Responses in Humans

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Prey and Feeding Patterns of Resident Bottlenose Dolphins (Tursiops truncatus) in Sarasota Bay, Florida

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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Into the Blue: Evolutionary Adaptations Associated with the Diversification of Baleen Whales

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The hypoxia adaptation of small mammals to plateau and underground burrow conditions

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Breathing Air and Living Underwater: Molecular Evolution of Genes Related to Antioxidant Response in Cetaceans and Pinnipeds

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Genomewide analysis of sperm whale E2 ubiquitin conjugating enzyme genes

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Evolution of mitochondrial energy metabolism genes associated with hydrothermal vent adaption of Alvinocaridid shrimps

inferred← citeshttps://doi.org/10.1007/s13258-018-0674-4openalex-snapshot

Mitochondrial OXPHOS genes provides insights into genetics basis of hypoxia adaptation in anchialine cave shrimps

inferred← citeshttps://doi.org/10.1016/b978-0-323-90516-9.00013-0openalex-snapshot

Genetic and molecular adaptations

inferred← citeshttps://doi.org/10.1016/b978-0-443-13669-6.00006-6openalex-snapshot

Beaked whales of the genus Mesoplodon Gervais, 1850

inferred← citeshttps://doi.org/10.1016/b978-0-443-13669-6.00007-8openalex-snapshot

Bottlenose whales Hyperoodon ampullatus (Forster, 1770) and Hyperoodon planifrons Flower, 1882

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The survival and respiration response of two abalones under short-term hypoxia challenges

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Deiminated proteins and extracellular vesicles - Novel serum biomarkers in whales and orca

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Transcriptome analysis reveals a high aerobic capacity in the whale brain

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Dolphin leukocytes exhibit an attenuated cytokine response and increase heme oxygenase activity upon exposure to lipopolysaccharides

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Metabolism: Evolution of dolphin sperm endurance

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Comparative transcriptomic analysis of the thymus and other immune-related tissues using post-mortem samples from stranded cetaceans in South Korea

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Into the Blue: Exploring genetic mechanisms behind the evolution of baleen whales

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Turning the Oxygen Dial: Balancing the Highs and Lows

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The Antarctic Weddell seal genome reveals evidence of selection on cardiovascular phenotype and lipid handling

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An integrated comparative physiology and molecular approach pinpoints mediators of breath-hold capacity in dolphins

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Pressure-tolerant Evolution in Rhodopsin of Deep-diving Whales

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Genomic and transcriptomic analyses reveal the adaptation to semi-aquatic and aquatic life in spiders

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Stronger selective constraint on downstream genes in the oxidative phosphorylation pathway of cetaceans

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Genes lost during the transition from land to water in cetaceans highlight genomic changes associated with aquatic adaptations

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Alterations of pleiotropic neuropeptide-receptor gene couples in Cetacea

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Pygmy sperm whale multi-omics data reveal hypoxia adaptations in deep-diving cetaceans

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Adaptations to a hypoxic lifestyle in naked mole-rats

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Beluga whale pVHL enhances HIF-2α activity via inducing HIF-2α proteasomal degradation under hypoxia

inferred← citeshttps://doi.org/10.24072/pci.genomics.100256openalex-snapshot

Positive selection acted upon cetacean ion channels during the aquatic transition

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Peer Review #1 of "The dopamine receptor D5 gene shows signs of independent erosion in toothed and baleen whales (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.7758v0.1/reviews/2openalex-snapshot

Peer Review #2 of "The dopamine receptor D5 gene shows signs of independent erosion in toothed and baleen whales (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.7758v0.2/reviews/1openalex-snapshot

Peer Review #1 of "The dopamine receptor D5 gene shows signs of independent erosion in toothed and baleen whales (v0.2)"

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The dopamine receptor D 5 gene shows signs of independent erosion in toothed and baleen whales

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.