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Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola)

https://doi.org/10.1093/gigascience/giab035

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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MITOS: Improved de novo metazoan mitochondrial genome annotation

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Assembly of long, error-prone reads using repeat graphs

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Fast and accurate long-read assembly with wtdbg2

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Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm

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GenomeScope: fast reference-free genome profiling from short reads

inferredcites →https://doi.org/10.1093/bioinformatics/bty191openalex-snapshot

Minimap2: pairwise alignment for nucleotide sequences

inferredcites →https://doi.org/10.1093/gbe/evw134openalex-snapshot

Gene Family Evolution Reflects Adaptation to Soil Environmental Stressors in the Genome of the CollembolanOrchesella cincta

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A High-quality Draft Genome Assembly of Sinella curviseta : A Soil Model Organism (Collembola)

inferredcites →https://doi.org/10.1093/gigascience/giab035openalex-snapshot

Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola)

inferredcites →https://doi.org/10.1093/gigascience/giz122openalex-snapshot

A high-quality genome assembly from a single, field-collected spotted lanternfly ( Lycorma delicatula ) using the PacBio Sequel II system

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inferredcites →https://doi.org/10.1093/nar/gky1053openalex-snapshot

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inferredcites →https://doi.org/10.1093/nar/gky1085openalex-snapshot

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inferredcites →https://doi.org/10.1101/gr.263566.120openalex-snapshot

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inferredcites →https://doi.org/10.1111/1755-0998.13146openalex-snapshot

Streamlining universal single‐copy orthologue and ultraconserved element design: A case study in Collembola

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Evolutionary ecology of beta‐lactam gene clusters in animals

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The Collembola of Fennoscandia and Denmark, Part II: Entomobryomorpha and Symphypleona

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FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies

inferredcites →https://doi.org/10.13080/z-a.2016.103.021openalex-snapshot

The assemblages of soil-dwelling springtails (Collembola) in winter rye under long-term monoculture and crop rotation

inferredcites →https://doi.org/10.1534/g3.119.400908openalex-snapshot

BlobToolKit – Interactive Quality Assessment of Genome Assemblies

inferredcites →https://doi.org/10.3390/genes10010062openalex-snapshot

A High-Quality De novo Genome Assembly from a Single Mosquito Using PacBio Sequencing

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