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Computational Sequence Analysis of Inversion Breakpoint Regions in the CactophilicDrosophila mojavensisLineage

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferreduses_data →https://doi.org/10.5281/zenodo.10723540zenodo-depositor-declared

inferredcites →https://doi.org/10.1002/0471250953.bi0410s25openalex-snapshot

Using RepeatMasker to Identify Repetitive Elements in Genomic Sequences

inferredcites →https://doi.org/10.1002/0471250953.bi1003s00openalex-snapshot

Using MUMmer to Identify Similar Regions in Large Sequence Sets

inferredcites →https://doi.org/10.1002/bies.950160410openalex-snapshot

Gross chromosome rearrangements mediated by transposable elements in Drosophila melanogaster

inferredcites →https://doi.org/10.1007/978-0-387-98141-3openalex-snapshot

ggplot2: Elegant Graphics for Data Analysis

inferredcites →https://doi.org/10.1007/s00412-008-0201-5openalex-snapshot

Cloning and sequencing of the breakpoint regions of inversion 5g fixed in Drosophila buzzatii

inferredcites →https://doi.org/10.1007/s10577-011-9195-6openalex-snapshot

Testing chromosomal phylogenies and inversion breakpoint reuse in Drosophila. The martensis cluster revisited

inferredcites →https://doi.org/10.1007/s10709-008-9259-5openalex-snapshot

Characterization of new hAT transposable elements in 12 Drosophila genomes

inferredcites →https://doi.org/10.1007/s10709-008-9296-0openalex-snapshot

Sequence signatures of a recent chromosomal rearrangement in Drosophila mojavensis

inferredcites →https://doi.org/10.1007/s10709-010-9439-yopenalex-snapshot

hAT transposable elements and their derivatives: an analysis in the 12 Drosophila genomes

inferredcites →https://doi.org/10.1016/j.dci.2017.06.008openalex-snapshot

The Drosophila Thioester containing Protein-4 participates in the induction of the cellular immune response to the pathogen Photorhabdus

inferredcites →https://doi.org/10.1016/j.jtherbio.2005.02.002openalex-snapshot

A genetic analysis of variation for the ability to fly after exposure to thermal stress in Drosophila mojavensis

inferredcites →https://doi.org/10.1016/j.tig.2005.09.009openalex-snapshot

Chromosome evolution in eukaryotes: a multi-kingdom perspective

inferredcites →https://doi.org/10.1016/j.tig.2015.05.010openalex-snapshot

Human Structural Variation: Mechanisms of Chromosome Rearrangements

inferredcites →https://doi.org/10.1016/j.tree.2004.06.013openalex-snapshot

Chromosomal inversion polymorphisms and adaptation

inferredcites →https://doi.org/10.1016/j.ympev.2012.05.012openalex-snapshot

Monophyly, divergence times, and evolution of host plant use inferred from a revised phylogeny of the Drosophila repleta species group

inferredcites →https://doi.org/10.1016/s0306-4565(02)00057-8openalex-snapshot

Adaptation of Drosophila to temperature extremes: bringing together quantitative and molecular approaches

inferredcites →https://doi.org/10.1017/cbo9780511623486openalex-snapshot

The Neutral Theory of Molecular Evolution

inferredcites →https://doi.org/10.1038/384346a0openalex-snapshot

High intrinsic rate of DNA loss in Drosophila

inferredcites →https://doi.org/10.1038/hdy.1976.60openalex-snapshot

The Genetics and Biology of Drosophila

inferredcites →https://doi.org/10.1038/hdy.1993.85openalex-snapshot

Evolutionary cytogenetics of the Drosophila buzzatii species complex

inferredcites →https://doi.org/10.1038/hdy.2015.4openalex-snapshot

A molecular perspective on a complex polymorphic inversion system with cytological evidence of multiply reused breakpoints

inferredcites →https://doi.org/10.1038/nature06341openalex-snapshot

Evolution of genes and genomes on the Drosophila phylogeny

inferredcites →https://doi.org/10.1038/nature10944openalex-snapshot

The genomic basis of adaptive evolution in threespine sticklebacks

inferredcites →https://doi.org/10.1038/nrg3521openalex-snapshot

New genes as drivers of phenotypic evolution

inferredcites →https://doi.org/10.1038/scientificamerican1179-98openalex-snapshot

The Neutral Theory of Molecular Evolution

inferredcites →https://doi.org/10.1038/srep30715openalex-snapshot

The origin of chromosomal inversions as a source of segmental duplications in the Sophophora subgenus of Drosophila

inferredcites →https://doi.org/10.1038/srep36248openalex-snapshot

Multiple and diverse structural changes affect the breakpoint regions of polymorphic inversions across the Drosophila genus

inferredcites →https://doi.org/10.1046/j.1365-2435.1998.00270.xopenalex-snapshot

Resistance to thermal stress in desert Drosophila

inferredcites →https://doi.org/10.1046/j.1420-9101.1995.8030369.xopenalex-snapshot

The evolutionary history of Drosophila buzzatti. XXVI. Macrogeographic patterns of inversion polymorphism in New World populations

inferredcites →https://doi.org/10.1073/pnas.0403090101openalex-snapshot

Silencing of a gene adjacent to the breakpoint of a widespread Drosophila inversion by a transposon-induced antisense RNA

inferredcites →https://doi.org/10.1073/pnas.240462997openalex-snapshot

Prevalence of small inversions in yeast gene order evolution

inferredcites →https://doi.org/10.1093/bfgp/elv020openalex-snapshot

Human inversions and their functional consequences

inferredcites →https://doi.org/10.1093/bioinformatics/18.3.492openalex-snapshot

GRIMM: genome rearrangements web server

inferredcites →https://doi.org/10.1093/gbe/evt076openalex-snapshot

A Divergent P Element and Its Associated MITE, BuT5, Generate Chromosomal Inversions and Are Widespread within the Drosophila repleta Species Group

inferredcites →https://doi.org/10.1093/gbe/evu291openalex-snapshot

Genomics of Ecological Adaptation in Cactophilic Drosophila

inferredcites →https://doi.org/10.1093/genetics/146.2.695openalex-snapshot

Recombination and Gene Flux Caused by Gene Conversion and Crossing Over in Inversion Heterokaryotypes

inferredcites →https://doi.org/10.1093/genetics/161.3.1137openalex-snapshot

Chromosomal Elements Evolve at Different Rates in the Drosophila Genome

inferredcites →https://doi.org/10.1093/genetics/163.1.181openalex-snapshot

Sequence Variation of Alcohol Dehydrogenase (Adh) Paralogs in Cactophilic Drosophila

inferredcites →https://doi.org/10.1093/genetics/21.5.554openalex-snapshot

THE RELATIONS OF INVERSIONS IN THE X CHROMOSOME OF DROSOPHILA MELANOGASTER TO CROSSING OVER AND DISJUNCTION

inferredcites →https://doi.org/10.1093/genetics/61.3.763openalex-snapshot

THE AVERAGE NUMBER OF GENERATIONS UNTIL FIXATION OF A MUTANT GENE IN A FINITE POPULATION

inferredcites →https://doi.org/10.1093/icb/41.4.877openalex-snapshot

Chemical Interactions in the Cactus-Microorganism-DrosophilaModel System of the Sonoran Desert

inferredcites →https://doi.org/10.1093/jhered/esl065openalex-snapshot

Localization and Characterization of X Chromosome Inversion Breakpoints Separating Drosophila mojavensis and Drosophila arizonae

inferredcites →https://doi.org/10.1093/molbev/msg236openalex-snapshot

Temporal Patterns of Fruit Fly (Drosophila) Evolution Revealed by Mutation Clocks

inferredcites →https://doi.org/10.1093/molbev/msh019openalex-snapshot

Population Genetics and Geographic Variation of Alcohol Dehydrogenase (Adh) Paralogs and Glucose-6-Phosphate Dehydrogenase (G6pd) in Drosophila mojavensis

inferredcites →https://doi.org/10.1093/molbev/msr121openalex-snapshot

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

inferredcites →https://doi.org/10.1093/molbev/mss067openalex-snapshot

Segmental Duplication, Microinversion, and Gene Loss Associated with a Complex Inversion Breakpoint Region in Drosophila

inferredcites →https://doi.org/10.1093/molbev/msu177openalex-snapshot

Characterization of the Breakpoints of a Polymorphic Inversion Complex Detects Strict and Broad Breakpoint Reuse at the Molecular Level

inferredcites →https://doi.org/10.1093/molbev/msx230openalex-snapshot

Natural Selection Drives Rapid Functional Evolution of Young Drosophila Duplicate Genes

inferredcites →https://doi.org/10.1093/nar/gkw1016openalex-snapshot

FlyBase at 25: looking to the future

inferredcites →https://doi.org/10.1093/oxfordjournals.jhered.a110922openalex-snapshot

Evolution of the Mojavensis Cluster of Cactophilic Drosophila with Descriptions of Two New Species

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025926openalex-snapshot

High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026334openalex-snapshot

Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis

inferredcites →https://doi.org/10.1101/gr.172702openalex-snapshot

Fourfold Faster Rate of Genome Rearrangement in Nematodes Than in Drosophila

inferredcites →https://doi.org/10.1101/gr.3059305openalex-snapshot

Comparative genome sequencing of Drosophila pseudoobscura : Chromosomal, gene, and cis -element evolution

inferredcites →https://doi.org/10.1101/gr.3263105openalex-snapshot

A BAC-based physical map of theDrosophila buzzatiigenome

inferredcites →https://doi.org/10.1101/gr.3436305openalex-snapshot

Comparative genome analyses of Arabidopsis spp.: Inferring chromosomal rearrangement events in the evolutionary history of A. thaliana

inferredcites →https://doi.org/10.1111/evo.12650openalex-snapshot

Genome-wide tests for introgression between cactophilicDrosophilaimplicate a role of inversions during speciation

inferredcites →https://doi.org/10.1111/j.0014-3820.2003.tb00340.xopenalex-snapshot

LOW OCCURRENCE OF GENE TRANSPOSITION EVENTS DURING THE EVOLUTION OF THE GENUS DROSOPHILA

inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01731.xopenalex-snapshot

STRUCTURE AND POPULATION GENETICS OF THE BREAKPOINTS OF A POLYMORPHIC INVERSION INDROSOPHILA SUBOBSCURA

inferredcites →https://doi.org/10.1111/j.1574-6968.1999.tb13575.xopenalex-snapshot

BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences

inferredcites →https://doi.org/10.1111/mec.14381openalex-snapshot

Genomics of natural populations: Evolutionary forces that establish and maintain gene arrangements in Drosophila pseudoobscura

inferredcites →https://doi.org/10.1126/science.1111387openalex-snapshot

Dynamics of Mammalian Chromosome Evolution Inferred from Multispecies Comparative Maps

inferredcites →https://doi.org/10.1126/science.1196380openalex-snapshot

New Genes in Drosophila Quickly Become Essential

inferredcites →https://doi.org/10.1126/science.285.5426.415openalex-snapshot

Generation of a Widespread Drosophila Inversion by a Transposable Element

inferredcites →https://doi.org/10.1136/jmg.8.4.545-bopenalex-snapshot

Genetics of the Evolutionary Process

inferredcites →https://doi.org/10.1146/annurev.ecolsys.39.110707.173532openalex-snapshot

Revisiting the Impact of Inversions in Evolution: From Population Genetic Markers to Drivers of Adaptive Shifts and Speciation?

inferredcites →https://doi.org/10.1146/annurev.ge.22.120188.001051openalex-snapshot

RECOMBINATION BETWEEN REPEATED GENES IN MICROORGANISMS

inferredcites →https://doi.org/10.1159/000080806openalex-snapshot

Breakpoint analysis of the pericentric inversion between chimpanzee chromosome 10 and the homologous chromosome 12 in humans

inferredcites →https://doi.org/10.1159/000321554openalex-snapshot

Analysis of Thioester-Containing Proteins during the Innate Immune Response of Drosophila melanogaster

inferredcites →https://doi.org/10.1159/000450610openalex-snapshot

Thioester-Containing Protein-4 Regulates the Drosophila Immune Signaling and Function against the Pathogen Photorhabdus

inferredcites →https://doi.org/10.11646/zootaxa.1069.1.1openalex-snapshot

Molecular systematics and geographical distribution of the Drosophila longicornis species complex (Diptera: Drosophilidae)

inferredcites →https://doi.org/10.1186/1471-2105-5-113openalex-snapshot

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

inferredcites →https://doi.org/10.1186/1471-2164-13-53openalex-snapshot

Gene alterations at Drosophila inversion breakpoints provide prima facie evidence for natural selection as an explanation for rapid chromosomal evolution

inferredcites →https://doi.org/10.1186/gb-2002-3-12-research0086openalex-snapshot

Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophilagenome

inferredcites →https://doi.org/10.1353/book.109740openalex-snapshot

Ecology of Sonoran Desert Plants and Plant Communities

inferredcites →https://doi.org/10.1371/journal.pbio.0050152openalex-snapshot

Principles of Genome Evolution in the Drosophila melanogaster Species Group

inferredcites →https://doi.org/10.1371/journal.pbio.1000501openalex-snapshot

How and Why Chromosome Inversions Evolve

inferredcites →https://doi.org/10.1371/journal.pgen.0010056openalex-snapshot

Discovery of Human Inversion Polymorphisms by Comparative Analysis of Human and Chimpanzee DNA Sequence Assemblies

inferredcites →https://doi.org/10.1371/journal.pgen.1003056openalex-snapshot

Population Genomics of Inversion Polymorphisms in Drosophila melanogaster

inferredcites →https://doi.org/10.1371/journal.pone.0007883openalex-snapshot

The Transposon Galileo Generates Natural Chromosomal Inversions in Drosophila by Ectopic Recombination

inferredcites →https://doi.org/10.1371/journal.pone.0190385openalex-snapshot

Species delimitation in the Stenocereus griseus (Cactaceae) species complex reveals a new species, S. huastecorum

inferredcites →https://doi.org/10.1379/1466-1268(1999)004<0243:acohea>2.3.co;2openalex-snapshot

A comparison of Hsp70 expression and thermotolerance in adults and larvae of three Drosophila species

inferredcites →https://doi.org/10.1385/1-59259-755-6:021openalex-snapshot

Detection of Transposable Elements in Drosophila Salivary Gland Polytene Chromosomes by In Situ Hybridization

inferredcites →https://doi.org/10.1534/g3.116.033779openalex-snapshot

Genome Evolution in Three Species of CactophilicDrosophila

inferredcites →https://doi.org/10.1534/genetics.105.047985openalex-snapshot

Chromosome Inversions, Local Adaptation and Speciation

inferredcites →https://doi.org/10.1534/genetics.106.062612openalex-snapshot

Testing Chromosomal Phylogenies and Inversion Breakpoint Reuse in Drosophila

inferredcites →https://doi.org/10.1534/genetics.107.073932openalex-snapshot

Positive Selection Near an Inversion Breakpoint on the Neo-XChromosome ofDrosophila americana

inferredcites →https://doi.org/10.1534/genetics.107.086074openalex-snapshot

Polytene Chromosomal Maps of 11 Drosophila Species: The Order of Genomic Scaffolds Inferred From Genetic and Physical Maps

inferredcites →https://doi.org/10.1534/genetics.112.141622openalex-snapshot

Sequence-Based Detection and Breakpoint Assembly of Polymorphic Inversions

inferredcites →https://doi.org/10.1534/genetics.117.300426openalex-snapshot

The Spread of an Inversion with Migration and Selection

inferredcites →https://doi.org/10.1534/genetics.117.300583openalex-snapshot

Phylogeny of the Genus Drosophila

inferredcites →https://doi.org/10.1668/0003-1569(2001)041[0877:ciitcm]2.0.co;2openalex-snapshot

Chemical Interactions in the Cactus-Microorganism-Drosophila Model System of the Sonoran Desert1

inferredcites →https://doi.org/10.2307/1934300openalex-snapshot

Factors Affecting Host Plant Selection in Desert‐Adapted Cactiphilic Drosophila

inferredcites →https://doi.org/10.2307/2259553openalex-snapshot

Ecological Genetics and Evolution. The Cactus-Yeast-Drosophila Model System.

inferredcites →https://doi.org/10.2307/2408088openalex-snapshot

Dobzhansky's Genetics of Natural Populations, I-XLIII

inferredcites →https://doi.org/10.2307/4775openalex-snapshot

Host-Plant Specificity in the Cactophilic Drosophila mulleri Species Complex

inferredcites →https://doi.org/10.3389/fimmu.2017.00759openalex-snapshot

Evolution and Function of Thioester-Containing Proteins and the Complement System in the Innate Immune Response

inferredcites →https://doi.org/10.4161/fly.19423openalex-snapshot

The DAIBAM MITE element is involved in the origin of one fixed and two polymorphic Drosophila virilis phylad inversions

inferredcites →https://doi.org/10.5281/zenodo.10741885openalex-snapshot

Reanalysis of polytene chromosomes in Drosophila mojavensis populations from Santa Catalina Island, California, USA.

inferredcites →https://doi.org/10.5281/zenodo.10742832openalex-snapshot

Genetics of the Evolutionary Process.

inferredcites →https://doi.org/10.5281/zenodo.10748572openalex-snapshot

Revision of the Morphocryptic, Caribbean Mayaguana Species Subcluster in the Drosophila repleta Group (Diptera: Drosophilidae).

inferredcites →https://doi.org/10.5281/zenodo.10765673openalex-snapshot

Ecologia y evolucion del subgrupo mulleri de Drosophila en Venezuela y Colombia.

inferredcites →https://doi.org/10.5281/zenodo.10772518openalex-snapshot

Cytological studies of the repleta group of the genus Drosophila: V. The mulleri subgroup.

inferredcites →https://doi.org/10.5281/zenodo.10772885openalex-snapshot

Analysis of the repleta group of Drosophila.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1093/gbe/evae191openalex-snapshot

Fundamental Patterns of Structural Evolution Revealed by Chromosome-Length Genomes of Cactophilic Drosophila

inferred← citeshttps://doi.org/10.1093/jhered/esy059openalex-snapshot

An Improved Genome Assembly for Drosophila navojoa, the Basal Species in the mojavensis Cluster

inferred← citeshttps://doi.org/10.1093/jhered/esy062openalex-snapshot

Ecological and Evolutionary Genomics: The CactophilicDrosophilaModel System

inferred← citeshttps://doi.org/10.1101/2022.10.16.512445openalex-snapshot

Chromosome-length genome assemblies of cactophilic Drosophila illuminate links between structural and sequence evolution

inferred← citeshttps://doi.org/10.1186/s12864-019-5590-8openalex-snapshot

Long-read based assembly and synteny analysis of a reference Drosophila subobscura genome reveals signatures of structural evolution driven by inversions recombination-suppression effects

inferred← citeshttps://doi.org/10.3389/fgene.2020.565836openalex-snapshot

The Cyclically Seasonal Drosophila subobscura Inversion O7 Originated From Fragile Genomic Sites and Relocated Immunity and Metabolic Genes

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