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Multiple Polyploidy Events in the Early Radiation of Nodulating and Nonnodulating Legumes
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s00122-014-2294-yopenalex-snapshot
New evidence of ancestral polyploidy in the Genistoid legume Lupinus angustifolius L. (narrow-leafed lupin)
inferredcites →https://doi.org/10.1016/j.pbi.2012.01.001openalex-snapshot
In silico archeogenomics unveils modern plant genome organisation, regulation and evolution
inferredcites →https://doi.org/10.1016/j.pbi.2012.03.011openalex-snapshot
Ancient whole genome duplications, novelty and diversification: the WGD Radiation Lag-Time Model
inferredcites →https://doi.org/10.1016/j.ympev.2012.05.035openalex-snapshot
Phylogeny reconstruction in the Caesalpinieae grade (Leguminosae) based on duplicated copies of the sucrose synthase gene and plastid markers
inferredcites →https://doi.org/10.1016/s1360-1385(02)02356-7openalex-snapshot
Evolution of signal transduction in intracellular symbiosis
inferredcites →https://doi.org/10.1038/nature08670openalex-snapshot
Genome sequence of the palaeopolyploid soybean
inferredcites →https://doi.org/10.1038/nature09916openalex-snapshot
Ancestral polyploidy in seed plants and angiosperms
inferredcites →https://doi.org/10.1038/nature10625openalex-snapshot
The Medicago genome provides insight into the evolution of rhizobial symbioses
inferredcites →https://doi.org/10.1038/nature12872openalex-snapshot
Three keys to the radiation of angiosperms into freezing environments
inferredcites →https://doi.org/10.1038/ncomms1009openalex-snapshot
The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus
inferredcites →https://doi.org/10.1038/ncomms5087openalex-snapshot
A single evolutionary innovation drives the deep evolution of symbiotic N2-fixation in angiosperms
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nprot.2013.084openalex-snapshot
De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity
inferredcites →https://doi.org/10.1073/pnas.0603228103openalex-snapshot
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes
inferredcites →https://doi.org/10.1073/pnas.0710618105openalex-snapshot
SymRK defines a common genetic basis for plant root endosymbioses with arbuscular mycorrhiza fungi, rhizobia, and Frankia bacteria
inferredcites →https://doi.org/10.1073/pnas.0813376106openalex-snapshot
Rosid radiation and the rapid rise of angiosperm-dominated forests
inferredcites →https://doi.org/10.1073/pnas.0900906106openalex-snapshot
Plants with double genomes might have had a better chance to survive the Cretaceous–Tertiary extinction event
inferredcites →https://doi.org/10.1073/pnas.92.7.2647openalex-snapshot
Chloroplast gene sequence data suggest a single origin of the predisposition for symbiotic nitrogen fixation in angiosperms.
inferredcites →https://doi.org/10.1080/10635150590945359openalex-snapshot
Placing Paleopolyploidy in Relation to Taxon Divergence: A Phylogenetic Analysis in Legumes Using 39 Gene Families
inferredcites →https://doi.org/10.1080/10635150590947131openalex-snapshot
Evolutionary Rates Analysis of Leguminosae Implicates a Rapid Diversification of Lineages during the Tertiary
inferredcites →https://doi.org/10.1080/10635150802429642openalex-snapshot
A Rapid Bootstrap Algorithm for the RAxML Web Servers
inferredcites →https://doi.org/10.1093/aob/mcs237openalex-snapshot
A study of the relationships of cultivated peanut (Arachis hypogaea) and its most closely related wild species using intron sequences and microsatellite markers
inferredcites →https://doi.org/10.1093/bioinformatics/bth397openalex-snapshot
DAGchainer: a tool for mining segmental genome duplications and synteny
inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot
PAML 4: Phylogenetic Analysis by Maximum Likelihood
inferredcites →https://doi.org/10.1093/molbev/mst152openalex-snapshot
Comparative Genomics Suggests That an Ancestral Polyploidy Event Leads to Enhanced Root Nodule Symbiosis in the Papilionoideae
inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot
MUSCLE: multiple sequence alignment with high accuracy and high throughput
inferredcites →https://doi.org/10.1093/nar/gkl315openalex-snapshot
PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments
inferredcites →https://doi.org/10.1093/nar/gkt377openalex-snapshot
STRAW: Species TRee Analysis Web server
inferredcites →https://doi.org/10.1093/sysbio/syt012openalex-snapshot
Statistical Inference of Allopolyploid Species Networks in the Presence of Incomplete Lineage Sorting
inferredcites →https://doi.org/10.1094/mpmi-05-11-0114openalex-snapshot
Phylogenetic Perspectives on the Origins of Nodulation
inferredcites →https://doi.org/10.1101/gr.168997.113openalex-snapshot
Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary
inferredcites →https://doi.org/10.1101/gr.3681406openalex-snapshot
Gene-balanced duplications, like tetraploidy, provide predictable drive to increase morphological complexity
inferredcites →https://doi.org/10.1101/gr.4825606openalex-snapshot
Widespread genome duplications throughout the history of flowering plants
inferredcites →https://doi.org/10.1104/pp.102.018150openalex-snapshot
The Rest of the Iceberg. Legume Diversity and Evolution in a Phylogenetic Context
inferredcites →https://doi.org/10.1105/tpc.021410openalex-snapshot
Functional Divergence of Duplicated Genes Formed by Polyploidy during Arabidopsis Evolution[W]
inferredcites →https://doi.org/10.1126/science.1198181openalex-snapshot
LysM-Type Mycorrhizal Receptor Recruited for Rhizobium Symbiosis in Nonlegume Parasponia
inferredcites →https://doi.org/10.1126/science.1241089openalex-snapshot
The Amborella Genome and the Evolution of Flowering Plants
inferredcites →https://doi.org/10.1139/b08-058openalex-snapshot
Phylogenetic patterns and diversification in the caesalpinioid legumesThis paper is one of a selection of papers published in the Special Issue on Systematics Research.
inferredcites →https://doi.org/10.1139/g04-047openalex-snapshot
Mining EST databases to resolve evolutionary events in major crop species
inferredcites →https://doi.org/10.1146/annurev-genet-110410-132549openalex-snapshot
The Rules of Engagement in the Legume-Rhizobial Symbiosis
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/1471-2105-12-323openalex-snapshot
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
inferredcites →https://doi.org/10.1186/1471-2148-10-302openalex-snapshot
A maximum pseudo-likelihood approach for estimating species trees under the coalescent model
inferredcites →https://doi.org/10.1186/1471-2148-10-61openalex-snapshot
Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryzaand their phylogenetic utility across various taxonomic levels
inferredcites →https://doi.org/10.1186/1471-2164-10-45openalex-snapshot
An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes.
inferredcites →https://doi.org/10.1186/1471-2164-13-90openalex-snapshot
De novo assembly and Characterisation of the Transcriptome during seed development, and generation of genic-SSR markers in Peanut (Arachis hypogaea L.)
inferredcites →https://doi.org/10.1186/gb-2012-13-1-r3openalex-snapshot
A genome triplication associated with early diversification of the core eudicots
inferredcites →https://doi.org/10.12705/622.8openalex-snapshot
Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species–rich clades
inferredcites →https://doi.org/10.1371/journal.pone.0011630openalex-snapshot
Polyploidy Did Not Predate the Evolution of Nodulation in All Legumes
inferredcites →https://doi.org/10.2307/2395272openalex-snapshot
The Bases of Angiosperm Phylogeny: Cytology
inferredcites →https://doi.org/10.3390/biology1030895openalex-snapshot
FLEXBAR—Flexible Barcode and Adapter Processing for Next-Generation Sequencing Platforms
inferredcites →https://doi.org/10.3732/ajb.0800079openalex-snapshot
Polyploidy and angiosperm diversification
inferredcites →https://doi.org/10.3732/ajb.0900346openalex-snapshot
The age and diversification of the angiosperms re‐revisited
inferredcites →https://doi.org/10.3732/ajb.1200380openalex-snapshot
Revisiting the phylogeny of papilionoid legumes: New insights from comprehensively sampled early‐branching lineages
inferredcites →https://doi.org/10.3732/ajb.91.11.1846openalex-snapshot
A phylogeny of legumes (Leguminosae) based on analysis of the plastid mat K gene resolves many well‐supported subclades within the family
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3897/phytokeys.240.101716zenodo-depositor-declared
Advances in Legume Systematics 14. Classification of Caesalpinioideae. Part 2: Higher-level classification
inferred← citeshttps://doi.org/10.1002/9781119409144.ch114openalex-snapshot
Comparative genomics suggests that an ancestral polyploidy event leads to enhanced root nodule symbiosis in the Papilionoideae
inferred← citeshttps://doi.org/10.1002/ajb2.1016openalex-snapshot
Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life
inferred← citeshttps://doi.org/10.1002/ajb2.1047openalex-snapshot
Phylotranscriptomic analysis and genome evolution of the Cypripedioideae (Orchidaceae)
inferred← citeshttps://doi.org/10.1002/ajb2.1056openalex-snapshot
Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)
inferred← citeshttps://doi.org/10.1002/ajb2.1069openalex-snapshot
From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Caryophyllales
inferred← citeshttps://doi.org/10.1002/ajb2.1468openalex-snapshot
Nuclear phylogenomic analyses of asterids conflict with plastome trees and support novel relationships among major lineages
inferred← citeshttps://doi.org/10.1002/ajb2.1568openalex-snapshot
Hybrid capture of 964 nuclear genes resolves evolutionary relationships in the mimosoid legumes and reveals the polytomous origins of a large pantropical radiation
inferred← citeshttps://doi.org/10.1002/ajb2.16387openalex-snapshot
A metabolic perspective on polyploid invasion and the emergence of life histories: Insights from a mechanistic model
inferred← citeshttps://doi.org/10.1002/ajb2.70178openalex-snapshot
Phylotranscriptomics and genome size evolution in Leucaena (Fabaceae): Paleotetraploid genomic stability overshadows diploidization and environmental effects
inferred← citeshttps://doi.org/10.1002/aps3.1036openalex-snapshot
Targeting legume loci: A comparison of three methods for target enrichment bait design in Leguminosae phylogenomics
inferred← citeshttps://doi.org/10.1002/ece3.2466openalex-snapshot
Dealing with paralogy in RAD seq data: in silico detection and single nucleotide polymorphism validation in Robinia pseudoacacia L.
inferred← citeshttps://doi.org/10.1002/leg3.16openalex-snapshot
The future of legume genetic data resources: Challenges, opportunities, and priorities
inferred← citeshttps://doi.org/10.1002/leg3.77openalex-snapshot
Genomic resources for lupins are coming of age
inferred← citeshttps://doi.org/10.1002/pro.4327openalex-snapshot
An integrated approach reveals how lipo‐chitooligosaccharides interact with the lysin motif receptor‐like kinase MtLYR3
inferred← citeshttps://doi.org/10.1002/tax.12207openalex-snapshot
Testing generic limits in Cercidoideae (Leguminosae): Insights from plastid and duplicated nuclear gene sequences
inferred← citeshttps://doi.org/10.1007/978-3-030-11048-2_15openalex-snapshot
Whole-Genome Duplications in Pear and Apple
inferred← citeshttps://doi.org/10.1007/978-3-030-21270-4_5openalex-snapshot
Transcriptome Resources Paving the Way for Lupin Crop Improvement
inferred← citeshttps://doi.org/10.1007/978-3-030-21270-4_7openalex-snapshot
Chromosomal Structure, History, and Genomic Synteny Relationships in Lupinus
inferred← citeshttps://doi.org/10.1007/978-3-030-21270-4_8openalex-snapshot
How Have Narrow-Leafed Lupin Genomic Resources Enhanced Our Understanding of Lupin Domestication?
inferred← citeshttps://doi.org/10.1007/978-3-030-21270-4_9openalex-snapshot
Genomic Applications and Resources to Dissect Flowering Time Control in Narrow-Leafed Lupin
inferred← citeshttps://doi.org/10.1007/978-3-031-15568-0_8openalex-snapshot
Multi-Omics Approaches for Breeding in Medicinal Plants
inferred← citeshttps://doi.org/10.1007/978-3-319-77776-4_11openalex-snapshot
Underutilised and Neglected Crops: Next Generation Sequencing Approaches for Crop Improvement and Better Food Security
inferred← citeshttps://doi.org/10.1007/978-3-319-99784-1_5openalex-snapshot
The Evolution of Living Beings Started with Prokaryotes and in Interaction with Prokaryotes
inferred← citeshttps://doi.org/10.1007/s00299-021-02818-xopenalex-snapshot
Identification and characterization of unique 5-hydroxyisoflavonoid biosynthetic key enzyme genes in Lupinus albus
inferred← citeshttps://doi.org/10.1007/s00425-023-04190-4openalex-snapshot
The draft genome reveals early duplication event in Pterocarpus santalinus: an endemic timber species
inferred← citeshttps://doi.org/10.1007/s00425-026-05021-yopenalex-snapshot
A chromosome-scale reference genome and integrative transcriptome provide insight into tissue- and stress-specific responses in tetraploid sainfoin (Onobrychis viciifolia)
inferred← citeshttps://doi.org/10.1007/s00606-020-01691-7openalex-snapshot
Interfamilial relationships in order Fabales: new insights from the nuclear regions sqd1 and 26S rDNA
inferred← citeshttps://doi.org/10.1007/s10577-016-9526-8openalex-snapshot
Integration of Lupinus angustifolius L. (narrow-leafed lupin) genome maps and comparative mapping within legumes
inferred← citeshttps://doi.org/10.1007/s10592-020-01279-1openalex-snapshot
Conservation genetics of the critically endangered Siamese rosewood (Dalbergia cochinchinensis): recommendations for management and sustainable use
inferred← citeshttps://doi.org/10.1007/s10709-024-00205-4openalex-snapshot
Cytomolecular trends in Chamaecrista Moench (Caesalpinioideae, Leguminosae) diversification
inferred← citeshttps://doi.org/10.1007/s10722-023-01637-1openalex-snapshot
Plastid marker-based phylogeny reveals insights into relationships among Papilionoideae species
inferred← citeshttps://doi.org/10.1007/s10722-024-02237-3openalex-snapshot
Genome-wide analysis of the PLATZ gene family provides insights into the genome evolution of cultivated peanut (Arachis hypogaea, Leguminosae)
inferred← citeshttps://doi.org/10.1007/s11103-018-0784-zopenalex-snapshot
Comparative analysis of selection mode reveals different evolutionary rate and expression pattern in Arachis duranensis and Arachis ipaënsis duplicated genes
inferred← citeshttps://doi.org/10.1007/s12229-026-09338-xopenalex-snapshot
The Evolution of Type II MIKCc MADS-Box Genes in Legumes: An Overview of Their Developmental Functions
inferred← citeshttps://doi.org/10.1007/s40415-020-00631-6openalex-snapshot
Chromosome number evolution in dalbergioid legumes (Papilionoideae, Leguminosae)
inferred← citeshttps://doi.org/10.1007/s42994-025-00208-5openalex-snapshot
Harnessing omics to decode the mechanisms of symbiotic nitrogen fixation
inferred← citeshttps://doi.org/10.1016/b978-0-12-814232-5.00001-0openalex-snapshot
Genomics and Evolution of Medicinal Plants
inferred← citeshttps://doi.org/10.1016/b978-0-443-23971-7.00002-xopenalex-snapshot
Crosstalk of multiomics approaches with medicinal plants of therapeutic importance
inferred← citeshttps://doi.org/10.1016/bs.abr.2015.09.007openalex-snapshot
The Implications of Polyploidy for the Evolution of Signalling in Rhizobial Nodulation Symbiosis
inferred← citeshttps://doi.org/10.1016/j.gene.2019.04.052openalex-snapshot
The characteristic of Arachis duranensis-specific genes and their potential function
inferred← citeshttps://doi.org/10.1016/j.gene.2020.144915openalex-snapshot
Genome-wide systematic characterization and expression analysis of the phosphatidylinositol 4-phosphate 5-kinases in plants
inferred← citeshttps://doi.org/10.1016/j.indcrop.2025.120677openalex-snapshot
A chromosome-scale genome assembly of Acacia melanoxylon provides new insights into its root nodule and heartwood formation
inferred← citeshttps://doi.org/10.1016/j.molp.2018.01.002openalex-snapshot
Widespread Whole Genome Duplications Contribute to Genome Complexity and Species Diversity in Angiosperms
inferred← citeshttps://doi.org/10.1016/j.molp.2019.10.012openalex-snapshot
Genetic Contribution of Paleopolyploidy to Adaptive Evolution in Angiosperms
inferred← citeshttps://doi.org/10.1016/j.molp.2021.02.006openalex-snapshot
Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae
inferred← citeshttps://doi.org/10.1016/j.pbi.2016.01.002openalex-snapshot
Has the connection between polyploidy and diversification actually been tested?
inferred← citeshttps://doi.org/10.1016/j.pbi.2018.03.006openalex-snapshot
Subgenome assignment in allopolyploids: challenges and future directions
inferred← citeshttps://doi.org/10.1016/j.plantsci.2017.09.007openalex-snapshot
Legume isoflavone synthase genes have evolved by whole-genome and local duplications yielding transcriptionally active paralogs
inferred← citeshttps://doi.org/10.1016/j.plaphy.2018.03.004openalex-snapshot
Genome-wide profiling of expression and biochemical functions of the Medicago glutathione S-transferase gene family
inferred← citeshttps://doi.org/10.1016/j.plaphy.2026.111339openalex-snapshot
Molecular mechanisms of drought tolerance in Lespedeza davurica: Identification and functional characterization of a novel ALDH family gene (LdALDH2-19) in drought stress adaptation
inferred← citeshttps://doi.org/10.1016/j.sjbs.2021.01.038openalex-snapshot
Phylotranscriptomic analysis of Dillenia indica L. (Dilleniales, Dilleniaceae) and its systematics implication
inferred← citeshttps://doi.org/10.1016/j.tplants.2018.07.006openalex-snapshot
Whole-Genome Duplication and Plant Macroevolution
inferred← citeshttps://doi.org/10.1016/j.xplc.2019.100019openalex-snapshot
A Roadmap toward Engineered Nitrogen-Fixing Nodule Symbiosis
inferred← citeshttps://doi.org/10.1016/j.xplc.2024.100944openalex-snapshot
The genomes of seven economic Caesalpinioideae trees provide insights into polyploidization history and secondary metabolite biosynthesis
inferred← citeshttps://doi.org/10.1016/j.ygeno.2025.111004openalex-snapshot
Chromosome-level de novo genome unveils the evolution of Gleditsia sinensis and thorns development
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.12.013openalex-snapshot
The effects of subsampling gene trees on coalescent methods applied to ancient divergences
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.01.008openalex-snapshot
A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta)
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.08.018openalex-snapshot
Evolution of a CAM anatomy predates the origins of Crassulacean acid metabolism in the Agavoideae (Asparagaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.10.015openalex-snapshot
Timing and host plant associations in the evolution of the weevil tribe Apionini (Apioninae, Brentidae, Curculionoidea, Coleoptera) indicate an ancient co-diversification pattern of beetles and flowering plants
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.11.004openalex-snapshot
Evolution in African tropical trees displaying ploidy-habitat association: The genus Afzelia (Leguminosae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.11.007openalex-snapshot
Evolution of CYCLOIDEA-like genes in Fabales: Insights into duplication patterns and the control of floral symmetry
inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107236openalex-snapshot
In and out: Evolution of viral sequences in the mitochondrial genomes of legumes (Fabaceae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2025.108438openalex-snapshot
Complex Reticulation in Backbone Subfamily Relationships in Legu-Minosae
inferred← citeshttps://doi.org/10.1016/j.ympev.2026.108703openalex-snapshot
Comparison of paralog identification methods and their impact on species tree topologies in target capture phylogenomics within the Sindora clade (Detarioideae: Leguminosae)
inferred← citeshttps://doi.org/10.1021/acs.jafc.6c04229openalex-snapshot
Evolution and Expression Divergence of Legume PAL Genes Suggest Associations with Drought Response and Root Nodule Development
inferred← citeshttps://doi.org/10.1038/nrg.2017.26openalex-snapshot
The evolutionary significance of polyploidy
inferred← citeshttps://doi.org/10.1038/s41438-020-00417-7openalex-snapshot
A chromosome-scale genome assembly of a diploid alfalfa, the progenitor of autotetraploid alfalfa
inferred← citeshttps://doi.org/10.1038/s41467-020-16338-xopenalex-snapshot
Allele-aware chromosome-level genome assembly and efficient transgene-free genome editing for the autotetraploid cultivated alfalfa
inferred← citeshttps://doi.org/10.1038/s41467-021-21094-7openalex-snapshot
Genetics of nodulation in Aeschynomene evenia uncovers mechanisms of the rhizobium–legume symbiosis
inferred← citeshttps://doi.org/10.1038/s41467-024-48036-3openalex-snapshot
Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants
inferred← citeshttps://doi.org/10.1038/s41467-024-50097-3openalex-snapshot
Evolution and subfunctionalization of CIPK6 homologous genes in regulating cotton drought resistance
inferred← citeshttps://doi.org/10.1038/s41467-025-58531-wopenalex-snapshot
The unexplored diversity of rough-seeded lupins provides rich genomic resources and insights into lupin evolution
inferred← citeshttps://doi.org/10.1038/s41467-025-60433-wopenalex-snapshot
One versus many independent assemblies of symbiotic nitrogen fixation in flowering plants
inferred← citeshttps://doi.org/10.1038/s41586-019-1693-2openalex-snapshot
One thousand plant transcriptomes and the phylogenomics of green plants
inferred← citeshttps://doi.org/10.1038/s41586-023-05791-5openalex-snapshot
The giant diploid faba genome unlocks variation in a global protein crop
inferred← citeshttps://doi.org/10.1038/s41588-019-0480-1openalex-snapshot
A reference genome for pea provides insight into legume genome evolution
inferred← citeshttps://doi.org/10.1038/s41598-017-13236-zopenalex-snapshot
Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogenetic Tree of the Paniceae Grasses
inferred← citeshttps://doi.org/10.1038/srep16958openalex-snapshot
Mimosoid legume plastome evolution: IR expansion, tandem repeat expansions and accelerated rate of evolution in clpP
inferred← citeshttps://doi.org/10.1038/srep34908openalex-snapshot
Genomics-assisted characterization of a breeding collection of Apios americana, an edible tuberous legume
inferred← citeshttps://doi.org/10.1071/sb19019openalex-snapshot
Advances in legume research in the genomics era
inferred← citeshttps://doi.org/10.1073/pnas.1424030112openalex-snapshot
Evolutionary signals of symbiotic persistence in the legume–rhizobia mutualism
inferred← citeshttps://doi.org/10.1073/pnas.1819227116openalex-snapshot
Reply to Nakatani and McLysaght: Analyzing deep duplication events
inferred← citeshttps://doi.org/10.1086/717329openalex-snapshot
The Phylogenetic Distribution and Frequency of Self-Incompatibility in Fabaceae
inferred← citeshttps://doi.org/10.1093/aob/mcae161openalex-snapshot
Phylogenomic analysis of target enrichment and transcriptome data uncovers rapid radiation and extensive hybridization in the slipper orchid genus Cypripedium
inferred← citeshttps://doi.org/10.1093/aob/mcw259openalex-snapshot
Evolution and structural diversification ofNictaba-like lectin genes in food crops with a focus on soybean (Glycine max)
inferred← citeshttps://doi.org/10.1093/aob/mcx121openalex-snapshot
The direct effects of plant polyploidy on the legume–rhizobia mutualism
inferred← citeshttps://doi.org/10.1093/bfgp/ely007openalex-snapshot
Significance of whole-genome duplications on the emergence of evolutionary novelties
inferred← citeshttps://doi.org/10.1093/bioinformatics/btac669openalex-snapshot
Tree2GD: a phylogenomic method to detect large-scale gene duplication events
inferred← citeshttps://doi.org/10.1093/botlinnean/boad026openalex-snapshot
Monnina (Polygalaceae), a New World monophyletic genus full of contrasts
inferred← citeshttps://doi.org/10.1093/dnares/dsac012openalex-snapshot
Chromosomal-level genome assembly of the orchid tree Bauhinia variegata (Leguminosae; Cercidoideae) supports the allotetraploid origin hypothesis of Bauhinia
inferred← citeshttps://doi.org/10.1093/dnares/dsw052openalex-snapshot
Function and evolution of a Lotus japonicus AP2/ERF family transcription factor that is required for development of infection threads
inferred← citeshttps://doi.org/10.1093/g3journal/jkad284openalex-snapshot
Chromosome-level genome of the transformable northern wattle, Acacia crassicarpa
inferred← citeshttps://doi.org/10.1093/g3journal/jkag171openalex-snapshot
Revisiting the genome assembly of Lupinus species reveals differential diploidization after a shared whole-genome duplication
inferred← citeshttps://doi.org/10.1093/gbe/evv014openalex-snapshot
Karyotype and Gene Order Evolution from Reconstructed Extinct Ancestors Highlight Contrasts in Genome Plasticity of Modern Rosid Crops
inferred← citeshttps://doi.org/10.1093/gbe/evw058openalex-snapshot
Evaluating and Characterizing Ancient Whole-Genome Duplications in Plants with Gene Count Data
inferred← citeshttps://doi.org/10.1093/gbe/evw060openalex-snapshot
A phylogenomic assessment of ancient polyploidy and genome evolution across the Poales
inferred← citeshttps://doi.org/10.1093/gbe/evw091openalex-snapshot
The Small Nuclear Genomes ofSelaginellaAre Associated with a Low Rate of Genome Size Evolution
inferred← citeshttps://doi.org/10.1093/gbe/evw127openalex-snapshot
Major Chromosomal Rearrangements Distinguish Willow and Poplar After the Ancestral “Salicoid” Genome Duplication
inferred← citeshttps://doi.org/10.1093/gbe/evy200openalex-snapshot
Assessing the performance of Ks plots for detecting ancient whole genome duplications
inferred← citeshttps://doi.org/10.1093/gbe/evz032openalex-snapshot
Multifarious Evolutionary Pathways of a Nuclear RNA Editing Factor: Disjunctions in Coevolution of DOT4 and Its Chloroplast Target rpoC1eU488SL
inferred← citeshttps://doi.org/10.1093/gbe/evz092openalex-snapshot
Ancient Polyploidy and Genome Evolution in Palms
inferred← citeshttps://doi.org/10.1093/gigascience/giaa004openalex-snapshot
Inferring putative ancient whole-genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions
inferred← citeshttps://doi.org/10.1093/gigascience/giae063openalex-snapshot
The genomes of 5 underutilized Papilionoideae crops provide insights into root nodulation and disease resistance
inferred← citeshttps://doi.org/10.1093/jxb/erw387openalex-snapshot
Starting points in plant-bacteria nitrogen-fixing symbioses: intercellular invasion of the roots
inferred← citeshttps://doi.org/10.1093/molbev/msv081openalex-snapshot
Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing
inferred← citeshttps://doi.org/10.1093/molbev/msv156openalex-snapshot
Divergence in Enzymatic Activities in the Soybean GST Supergene Family Provides New Insight into the Evolutionary Dynamics of Whole-Genome Duplicates
inferred← citeshttps://doi.org/10.1093/molbev/msw157openalex-snapshot
Multiple Polyploidization Events across Asteraceae with Two Nested Events in the Early History Revealed by Nuclear Phylogenomics
inferred← citeshttps://doi.org/10.1093/molbev/msw242openalex-snapshot
Evolution of Rosaceae Fruit Types Based on Nuclear Phylogeny in the Context of Geological Times and Genome Duplication
inferred← citeshttps://doi.org/10.1093/plcell/koaa015openalex-snapshot
Polyploidy: an evolutionary and ecological force in stressful times
inferred← citeshttps://doi.org/10.1093/sysbio/syaa013openalex-snapshot
Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae
inferred← citeshttps://doi.org/10.1093/sysbio/syaa041openalex-snapshot
The Origin of the Legumes is a Complex Paleopolyploid Phylogenomic Tangle Closely Associated with the Cretaceous–Paleogene (K–Pg) Mass Extinction Event
inferred← citeshttps://doi.org/10.1093/sysbio/syad029openalex-snapshot
Phylogenomic Analyses Reveal an Allopolyploid Origin of Core Didymocarpinae (Gesneriaceae) Followed by Rapid Radiation
inferred← citeshttps://doi.org/10.1093/sysbio/syaf057openalex-snapshot
Phylogenetic Resolution and Conflict in the Species-Rich Flowering Plant Family Leguminosae
inferred← citeshttps://doi.org/10.1093/sysbio/syx044openalex-snapshot
Gene-Tree Reconciliation with MUL-Trees to Resolve Polyploidy Events
inferred← citeshttps://doi.org/10.1094/mpmi-10-16-0218-ropenalex-snapshot
Evolutionary History of Subtilases in Land Plants and Their Involvement in Symbiotic Interactions
inferred← citeshttps://doi.org/10.1101/099044openalex-snapshot
Novel insights into karyotype evolution and whole genome duplications in legumes
inferred← citeshttps://doi.org/10.1101/2020.02.22.942557openalex-snapshot
A Sequence-Pair-Classification-Based Method for Detecting and Correcting Under-Clustered Gene Families
inferred← citeshttps://doi.org/10.1101/2022.07.31.502231openalex-snapshot
Two shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants
inferred← citeshttps://doi.org/10.1101/2024.02.05.578966openalex-snapshot
A comprehensive examination of Chelicerate genomes reveals no evidence for a whole genome duplication among spiders and scorpions
inferred← citeshttps://doi.org/10.1101/2024.03.07.583883openalex-snapshot
The unexplored diversity of wild lupins provides rich genomic resources and insights into lupin evolution
inferred← citeshttps://doi.org/10.1101/2024.09.24.614835openalex-snapshot
Unveiling allopolyploidization-driven genome duplications through progressive analysis of deep genome skimming data
inferred← citeshttps://doi.org/10.1104/pp.15.01470openalex-snapshot
Evolutionary Dynamics of the Leucine-Rich Repeat Receptor-Like Kinase (LRR-RLK) Subfamily in Angiosperms
inferred← citeshttps://doi.org/10.1104/pp.16.01132openalex-snapshot
Evolutionary and Functional Analysis of Membrane-Bound NAC Transcription Factor Genes in Soybean
inferred← citeshttps://doi.org/10.1111/1365-2745.13600openalex-snapshot
Evolution and biogeography of actinorhizal plants and legumes: A comparison
inferred← citeshttps://doi.org/10.1111/1755-0998.12493openalex-snapshot
Accounting for genotype uncertainty in the estimation of allele frequencies in autopolyploids
inferred← citeshttps://doi.org/10.1111/jipb.12746openalex-snapshot
A Malvaceae mystery: A mallow maelstrom of genome multiplications and maybe misleading methods?
inferred← citeshttps://doi.org/10.1111/jipb.12877openalex-snapshot
Recurrent genome duplication events likely contributed to both the ancient and recent rise of ferns
inferred← citeshttps://doi.org/10.1111/jipb.13078openalex-snapshot
Phylotranscriptomic insights into Asteraceae diversity, polyploidy, and morphological innovation
inferred← citeshttps://doi.org/10.1111/jipb.13972openalex-snapshot
Nuclear phylogenomics provide evidence to clarify key morphological evolution and whole‐genome duplication across rosids
inferred← citeshttps://doi.org/10.1111/jse.12537openalex-snapshot
Insights into the origin and evolution of plant sigma factors
inferred← citeshttps://doi.org/10.1111/jse.12712openalex-snapshot
Preferential retention of the slowly evolving gene in pairs of duplicates in angiosperm genomes
inferred← citeshttps://doi.org/10.1111/nph.13698openalex-snapshot
On the relative abundance of autopolyploids and allopolyploids
inferred← citeshttps://doi.org/10.1111/nph.13887openalex-snapshot
Analyses of transcriptome sequences reveal multiple ancient large‐scale duplication events in the ancestor of Sphagnopsida (Bryophyta)
inferred← citeshttps://doi.org/10.1111/nph.14094openalex-snapshot
The loss of vernalization requirement in narrow‐leafed lupin is associated with a deletion in the promoter and de‐repressed expression of a Flowering Locus T ( FT ) homologue
inferred← citeshttps://doi.org/10.1111/nph.14812openalex-snapshot
Improved transcriptome sampling pinpoints 26 ancient and more recent polyploidy events in Caryophyllales, including two allopolyploidy events
inferred← citeshttps://doi.org/10.1111/nph.15357openalex-snapshot
Widespread ancient whole‐genome duplications in Malpighiales coincide with Eocene global climatic upheaval
inferred← citeshttps://doi.org/10.1111/nph.15770openalex-snapshot
Reconstruction of ancestral genome reveals chromosome evolution history for selected legume species
inferred← citeshttps://doi.org/10.1111/nph.15926openalex-snapshot
Tracing the history of chromosome evolution in legumes using genomics
inferred← citeshttps://doi.org/10.1111/nph.16290openalex-snapshot
Large‐scale genomic sequence data resolve the deepest divergences in the legume phylogeny and support a near‐simultaneous evolutionary origin of all six subfamilies
inferred← citeshttps://doi.org/10.1111/nph.70080openalex-snapshot
Well‐resolved phylogeny supports repeated evolution of keel flowers as a synergistic contributor to papilionoid legume diversification
inferred← citeshttps://doi.org/10.1111/pbi.12615openalex-snapshot
A comprehensive draft genome sequence for lupin ( Lupinus angustifolius ), an emerging health food: insights into plant–microbe interactions and legume evolution
inferred← citeshttps://doi.org/10.1111/ppl.70803openalex-snapshot
High‐Quality Genome Assembly and Annotation of Ceratonia siliqua Provide Insights Into the Secondary Loss of Symbiotic Nitrogen Fixation
inferred← citeshttps://doi.org/10.1111/tpj.13070openalex-snapshot
Development of two major resources for pea genomics: the GenoPea 13.2K SNP Array and a high‐density, high‐resolution consensus genetic map
inferred← citeshttps://doi.org/10.1111/tpj.13553openalex-snapshot
Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention
inferred← citeshttps://doi.org/10.1111/tpj.15075openalex-snapshot
MtSUPERMAN plays a key role in compound inflorescence and flower development in Medicago truncatula
inferred← citeshttps://doi.org/10.1111/tpj.16044openalex-snapshot
The genome of the king protea, Protea cynaroides
inferred← citeshttps://doi.org/10.1111/tpj.16961openalex-snapshot
The vacuolar sulfate transporter PsSULTR4 is a key determinant of seed yield and protein composition in pea
inferred← citeshttps://doi.org/10.1111/tpj.17255openalex-snapshot
Genomic insights into drought adaptation of the forage shrub Caragana korshinskii (Fabaceae) widely planted in drylands
inferred← citeshttps://doi.org/10.1111/tpj.70505openalex-snapshot
The chromosome‐level genome of Stylosanthes guianensis provides insights into genome evolution and environmental adaptation
inferred← citeshttps://doi.org/10.1111/tpj.70981openalex-snapshot
Legume genome structures and histories inferred from Cercis canadensis and Chamaecrista fasciculata genomes
inferred← citeshttps://doi.org/10.1126/sciadv.1501084openalex-snapshot
Early genome duplications in conifers and other seed plants
inferred← citeshttps://doi.org/10.1126/sciadv.ade4954openalex-snapshot
Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
inferred← citeshttps://doi.org/10.1126/science.adf3727openalex-snapshot
Elucidation of the pathway for biosynthesis of saponin adjuvants from the soapbark tree
inferred← citeshttps://doi.org/10.1128/msystems.01299-20openalex-snapshot
Lineage-Specific Rewiring of Core Pathways Predating Innovation of Legume Nodules Shapes Symbiotic Efficiency
inferred← citeshttps://doi.org/10.1139/cjb-2019-0163openalex-snapshot
Screening of lupine germplasm for resistance against Phytophthora sojae
inferred← citeshttps://doi.org/10.1139/cjps-2017-0071openalex-snapshot
Red clover varieties show nitrogen fixing advantage during the early stages of seedling development
inferred← citeshttps://doi.org/10.1186/s12864-016-3150-zopenalex-snapshot
Expansion of the phosphatidylethanolamine binding protein family in legumes: a case study of Lupinus angustifolius L. FLOWERING LOCUS T homologs, LanFTc1 and LanFTc2
inferred← citeshttps://doi.org/10.1186/s12864-018-4798-3openalex-snapshot
De novo transcriptome assembly of Pueraria montana var. lobata and Neustanthus phaseoloides for the development of eSSR and SNP markers: narrowing the US origin(s) of the invasive kudzu
inferred← citeshttps://doi.org/10.1186/s12864-021-07384-wopenalex-snapshot
Orthology and synteny analysis of receptor-like kinases “RLK” and receptor-like proteins “RLP” in legumes
inferred← citeshttps://doi.org/10.1186/s12864-023-09530-yopenalex-snapshot
Lineage-specific amplification and epigenetic regulation of LTR-retrotransposons contribute to the structure, evolution, and function of Fabaceae species
inferred← citeshttps://doi.org/10.1186/s12870-015-0669-0openalex-snapshot
The impacts of polyploidy, geographic and ecological isolations on the diversification of Panax (Araliaceae)
inferred← citeshttps://doi.org/10.1186/s12870-018-1437-8openalex-snapshot
Evolution by duplication: paleopolyploidy events in plants reconstructed by deciphering the evolutionary history of VOZ transcription factors
inferred← citeshttps://doi.org/10.1186/s12870-019-2064-8openalex-snapshot
Fluctuations in Fabaceae mitochondrial genome size and content are both ancient and recent
inferred← citeshttps://doi.org/10.1186/s12870-021-03313-xopenalex-snapshot
Frequent ploidy changes in Salicaceae indicates widespread sharing of the salicoid whole genome duplication by the relatives of Populus L. and Salix L.
inferred← citeshttps://doi.org/10.1186/s12870-025-07671-8openalex-snapshot
Genome-wide identification, structural characterization and gene expression analysis of the LEA_2 gene family in faba bean (Vicia Faba L.)
inferred← citeshttps://doi.org/10.1186/s12915-021-01033-0openalex-snapshot
The genome of a wild Medicago species provides insights into the tolerant mechanisms of legume forage to environmental stress
inferred← citeshttps://doi.org/10.1186/s12915-023-01718-8openalex-snapshot
Distinct hybridization modes in wide- and narrow-ranged lineages of Causonis (Vitaceae)
inferred← citeshttps://doi.org/10.1186/s13059-025-03532-7openalex-snapshot
A special short-wing petal faba genome and genetic dissection of floral and yield-related traits accelerate breeding and improvement of faba bean
inferred← citeshttps://doi.org/10.1186/s40529-025-00454-2openalex-snapshot
Chromosome number variation and phylogenetic divergence of East Asian Cirsium sect. Onotrophe subsect. Nipponocirsium (Compositae), with a new species from Taiwan
inferred← citeshttps://doi.org/10.1186/s42269-021-00493-2openalex-snapshot
Molecular cytogenetical and biochemical studies on some Lupinus species
inferred← citeshttps://doi.org/10.12705/661.3openalex-snapshot
A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny: The Legume Phylogeny Working Group (LPWG)
inferred← citeshttps://doi.org/10.12705/665.7openalex-snapshot
Multi‐locus phylogeny of Ludwigia (Onagraceae): Insights on infra‐ generic relationships and the current classification of the genus
inferred← citeshttps://doi.org/10.1371/journal.pone.0179821openalex-snapshot
Epigenomic diversification within the genus Lupinus
inferred← citeshttps://doi.org/10.1371/journal.pone.0274267openalex-snapshot
A genome resource for Acacia, Australia’s largest plant genus
inferred← citeshttps://doi.org/10.18174/517889openalex-snapshot
Evolution of nitrogen-fixing root nodules : Analysis of conserved signalling modules in legumes and Parasponia
inferred← citeshttps://doi.org/10.21203/rs.2.17800/v1openalex-snapshot
Comparison of RWP-RK transcription factors between Arabidopsis and legumes uncovers a relationship between nitrogen signaling and nodulation
inferred← citeshttps://doi.org/10.21203/rs.2.20014/v1openalex-snapshot
Genome-wide identification, phylogeny, and expression profiling of RWP-RK gene family under low nitrogen and nodulation in Arabidopsis and legumes
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1317290/v1openalex-snapshot
Polyploid clades tend to be more speciose than their putative sister clades
inferred← citeshttps://doi.org/10.21203/rs.3.rs-70764/v1openalex-snapshot
Deep Evaluation to the Evolution History of Heat Shock Factor (HSF) Gene Family and Its Expansion Pattern in Seed Plants
inferred← citeshttps://doi.org/10.31274/td-20240329-518openalex-snapshot
Molecular evolution following allopolyploidization in Gossypium
inferred← citeshttps://doi.org/10.32469/10355/64234openalex-snapshot
C4 photosynthetic evolution : sub-types, diversity, and function within the grass tribe Paniceae
inferred← citeshttps://doi.org/10.3329/bjpt.v27i2.50677openalex-snapshot
Dissecting molecular evolutionary relationship of Krameriaceae inferred from phylotranscriptomic analysis
inferred← citeshttps://doi.org/10.3389/fmicb.2018.00126openalex-snapshot
Genome-Wide Identification and Classification of Soybean C2H2 Zinc Finger Proteins and Their Expression Analysis in Legume-Rhizobium Symbiosis
inferred← citeshttps://doi.org/10.3389/fpls.2015.00268openalex-snapshot
Structure, expression profile and phylogenetic inference of chalcone isomerase-like genes from the narrow-leafed lupin (Lupinus angustifolius L.) genome
inferred← citeshttps://doi.org/10.3389/fpls.2015.00710openalex-snapshot
Using targeted enrichment of nuclear genes to increase phylogenetic resolution in the neotropical rain forest genus Inga (Leguminosae: Mimosoideae)
inferred← citeshttps://doi.org/10.3389/fpls.2016.01152openalex-snapshot
A First Glimpse of Wild Lupin Karyotype Variation As Revealed by Comparative Cytogenetic Mapping
inferred← citeshttps://doi.org/10.3389/fpls.2018.00923openalex-snapshot
Evolutionary History of Plant LysM Receptor Proteins Related to Root Endosymbiosis
inferred← citeshttps://doi.org/10.3389/fpls.2018.01901openalex-snapshot
Nodulating Legumes Are Distinguished by a Sensitivity to Cytokinin in the Root Cortex Leading to Pseudonodule Development
inferred← citeshttps://doi.org/10.3389/fpls.2019.00345openalex-snapshot
Cercis: A Non-polyploid Genomic Relic Within the Generally Polyploid Legume Family
inferred← citeshttps://doi.org/10.3389/fpls.2019.00497openalex-snapshot
Contrasting Effects of Wild Arachis Dehydrin Under Abiotic and Biotic Stresses
inferred← citeshttps://doi.org/10.3389/fpls.2020.00251openalex-snapshot
Has the Polyploid Wave Ebbed?
inferred← citeshttps://doi.org/10.3389/fpls.2022.823190openalex-snapshot
Highly Resolved Papilionoid Legume Phylogeny Based on Plastid Phylogenomics
inferred← citeshttps://doi.org/10.3389/fpls.2022.869423openalex-snapshot
Impact of polyploidy on plant tolerance to abiotic and biotic stresses
inferred← citeshttps://doi.org/10.3389/fpls.2023.1103857openalex-snapshot
An improved reference genome for Trifolium subterraneum L. provides insight into molecular diversity and intra-specific phylogeny
inferred← citeshttps://doi.org/10.3390/cells10061296openalex-snapshot
Crosstalk of Multi-Omics Platforms with Plants of Therapeutic Importance
inferred← citeshttps://doi.org/10.3390/d17080571openalex-snapshot
The Chloroplast Genome of the Endemic Species Abrus bottae Deflers: Comparative and Phylogenetic Analysis with Closely Related Species of Abreae Hutch
inferred← citeshttps://doi.org/10.3390/f17070847openalex-snapshot
First Molecular Cytogenetic Characterization of Ceratonia siliqua and Assessment of Its Genome Size Across the Mediterranean Basin
inferred← citeshttps://doi.org/10.3390/genes10040259openalex-snapshot
Impact of Chromosomal Rearrangements on the Interpretation of Lupin Karyotype Evolution
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