On the public citation graph

NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes

https://doi.org/10.1093/nar/gkl244
0 signed · 1015 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/9780471650126.dob0534.pub2openalex-snapshot
PHYLIP ( PHYLogeny Inference Package)
inferredcites →https://doi.org/10.1016/j.cell.2006.02.017openalex-snapshot
Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1038/254083a0openalex-snapshot
Conservation of primary structure in 16S ribosomal RNA
inferredcites →https://doi.org/10.1046/j.1462-2920.2002.00357.xopenalex-snapshot
Diversity and distribution of a deeply branched novel proteobacterial group found in anaerobic–aerobic activated sludge processes
inferredcites →https://doi.org/10.1046/j.1472-765x.2002.01048.xopenalex-snapshot
Development of a high-volume aerosol collection system for the identification of air-borne micro-organisms
inferredcites →https://doi.org/10.1073/pnas.0504978102openalex-snapshot
Obesity alters gut microbial ecology
inferredcites →https://doi.org/10.1093/bib/5.2.150openalex-snapshot
MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
inferredcites →https://doi.org/10.1093/bioinformatics/btg200openalex-snapshot
Comprehensive aligned sequence construction for automated design of effective probes (CASCADE-P) using 16S rDNA
inferredcites →https://doi.org/10.1093/bioinformatics/bth226openalex-snapshot
Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
inferredcites →https://doi.org/10.1093/nar/22.22.4673openalex-snapshot
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
inferredcites →https://doi.org/10.1093/nar/gkh293openalex-snapshot
ARB: a software environment for sequence data
inferredcites →https://doi.org/10.1093/nar/gki038openalex-snapshot
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
inferredcites →https://doi.org/10.1101/gr.361602openalex-snapshot
The Bioperl Toolkit: Perl Modules for the Life Sciences
inferredcites →https://doi.org/10.1101/gr.8.3.175openalex-snapshot
Base-Calling of Automated Sequencer Traces Using Phred. I. Accuracy Assessment
inferredcites →https://doi.org/10.1101/gr.8.3.186openalex-snapshot
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities
inferredcites →https://doi.org/10.1126/science.1107851openalex-snapshot
Comparative Metagenomics of Microbial Communities
inferredcites →https://doi.org/10.1126/science.1110591openalex-snapshot
Diversity of the Human Intestinal Microbial Flora
inferredcites →https://doi.org/10.1126/science.276.5313.734openalex-snapshot
A Molecular View of Microbial Diversity and the Biosphere
inferredcites →https://doi.org/10.1126/science.6771870openalex-snapshot
The Phylogeny of Prokaryotes
inferredcites →https://doi.org/10.1128/aem.03006-05openalex-snapshot
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
inferredcites →https://doi.org/10.1128/aem.67.10.4399-4406.2001openalex-snapshot
Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity
inferredcites →https://doi.org/10.1128/aem.69.12.6961-6968.2003openalex-snapshot
Physiological and Community Responses of EstablishedGrassland Bacterial Populations to WaterStress
inferredcites →https://doi.org/10.1128/aem.71.3.1501-1506.2005openalex-snapshot
Introducing DOTUR, a Computer Program for Defining Operational Taxonomic Units and Estimating Species Richness
inferredcites →https://doi.org/10.1186/gb-2002-3-2-reviews0003openalex-snapshot
Exploring prokaryotic diversity in the genomic era.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4685797openalex-extracted
Response of Microbial Communities and Biogeochemical Cycle Functions to Sediment Physicochemical Properties and Microplastic Pollution Under Damming and Water Diversion Projects
inferred← citeshttps://doi.org/10.2139/ssrn.4764268openalex-extracted
Response of Microbial Communities and Biogeochemical Cycle Functions to Sediment Physicochemical Properties and Microplastic Pollution Under Damming and Water Diversion Projects
inferred← citeshttps://doi.org/10.1002/9781118010518.ch47openalex-snapshot
The Phyloware Project: A Software Framework for Phylogenomic Virtue
inferred← citeshttps://doi.org/10.1002/9781118010518.ch61openalex-snapshot
Application of Phylogenetic Oligonucleotide Microarrays in Microbial Analysis
inferred← citeshttps://doi.org/10.1002/9781118409855.ch4openalex-snapshot
Mathematical Approaches for Describing Microbial Populations: Practice and Theory for Extrapolation of Rich Environments
inferred← citeshttps://doi.org/10.1002/bit.24866openalex-snapshot
A novel nonwoven hybrid bioreactor (NWHBR) for enhancing simultaneous nitrification and denitrification
inferred← citeshttps://doi.org/10.1002/bit.26945openalex-snapshot
Electron‐acceptor loadings affect chloroform dechlorination in a hydrogen‐based membrane biofilm reactor
inferred← citeshttps://doi.org/10.1002/btpr.2151openalex-snapshot
Comparison of bacterial diversity in full scale anammox bioreactors operated under different conditions
inferred← citeshttps://doi.org/10.1002/fsn3.3340openalex-snapshot
Exploring the effects of palm kernel meal feeding on the meat quality and rumen microorganisms of Qinghai Tibetan sheep
inferred← citeshttps://doi.org/10.1002/jor.24421openalex-snapshot
Analysis of the Stomal Microbiota of a Percutaneous Osseointegrated Prosthesis: A Longitudinal Prospective Cohort Study
inferred← citeshttps://doi.org/10.1002/lno.10502openalex-snapshot
Spatiotemporal dynamics of bacterial community composition in large shallow eutrophic Lake Taihu: High overlap between free‐living and particle‐attached assemblages
inferred← citeshttps://doi.org/10.1002/mbo3.20openalex-snapshot
Diversity of Bacteria and Archaea in hypersaline sediment from Death Valley National Park, California
inferred← citeshttps://doi.org/10.1002/mbo3.236openalex-snapshot
Biodiversity hot spot on a hot spot: novel extremophile diversity in Hawaiian fumaroles
inferred← citeshttps://doi.org/10.1002/mbo3.238openalex-snapshot
Pyrosequencing analysis of a bacterial community associated with lava‐formed soil from the G otjawal forest in J eju, K orea
inferred← citeshttps://doi.org/10.1002/mbo3.7openalex-snapshot
Short‐term effects of temperature on the abundance and diversity of magnetotactic cocci
inferred← citeshttps://doi.org/10.1007/978-1-0716-3072-3_3openalex-snapshot
Metagenomics Databases for Bacteria
inferred← citeshttps://doi.org/10.1007/978-1-4471-5298-9_6openalex-snapshot
Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
inferred← citeshttps://doi.org/10.1007/978-1-4614-2356-0_57openalex-snapshot
Bioinformatics Tools for the Multilocus Phylogenetic Analysis of Fungi
inferred← citeshttps://doi.org/10.1007/978-3-031-21391-5_8openalex-snapshot
Moving Beyond OTU Methods
inferred← citeshttps://doi.org/10.1007/978-3-319-07623-2_16openalex-snapshot
The Evolutionary Space Model to be Used for the Metagenomic Analysis of Molecular and Adaptive Evolution in the Bacterial Communities
inferred← citeshttps://doi.org/10.1007/978-3-319-79026-8_3openalex-snapshot
Analytic Methods in Microbiome Studies
inferred← citeshttps://doi.org/10.1007/978-3-642-02008-7_29openalex-snapshot
Finding Biologically Accurate Clusterings in Hierarchical Tree Decompositions Using the Variation of Information
inferred← citeshttps://doi.org/10.1007/978-3-642-04043-6_12openalex-snapshot
Compost Microbial Populations and Interactions with Plants
inferred← citeshttps://doi.org/10.1007/978-3-7091-0947-2_3openalex-snapshot
High-Throughput Characterization and Comparison of Microbial Communities
inferred← citeshttps://doi.org/10.1007/978-94-007-0397-1_17openalex-snapshot
Microbial Diversity in Modern Stromatolites
inferred← citeshttps://doi.org/10.1007/978-981-16-6005-4_10openalex-snapshot
Next-Generation Amplicon Sequencing: A Cost-Effective Method for Exploring Microbial Biodiversity
inferred← citeshttps://doi.org/10.1007/bf03178323openalex-snapshot
The characterization and composition of bacterial communities in soils blended with spent foundry sand
inferred← citeshttps://doi.org/10.1007/bf03179967openalex-snapshot
Diazotrophic endophytes of native black cottonwood and willow
inferred← citeshttps://doi.org/10.1007/s00114-011-0848-2openalex-snapshot
Promiscuity in mice is associated with increased vaginal bacterial diversity
inferred← citeshttps://doi.org/10.1007/s00203-012-0822-1openalex-snapshot
Acetatifactor muris gen. nov., sp. nov., a novel bacterium isolated from the intestine of an obese mouse
inferred← citeshttps://doi.org/10.1007/s00203-012-0846-6openalex-snapshot
Streptococcus danieliae sp. nov., a novel bacterium isolated from the caecum of a mouse
inferred← citeshttps://doi.org/10.1007/s00203-020-02084-7openalex-snapshot
Taxonomic profiling and functional characterization of the healthy human oral bacterial microbiome from the north Indian urban sub-population
inferred← citeshttps://doi.org/10.1007/s00203-021-02644-5openalex-snapshot
Structural and functional changes in soil bacterial communities by drifting spray application of a commercial red seaweed extract as revealed by metagenomics
inferred← citeshttps://doi.org/10.1007/s00248-006-9134-9openalex-snapshot
High-Density Universal 16S rRNA Microarray Analysis Reveals Broader Diversity than Typical Clone Library When Sampling the Environment
inferred← citeshttps://doi.org/10.1007/s00248-008-9366-yopenalex-snapshot
Ecophysiology of the Developing Total Bacterial and Lactobacillus Communities in the Terminal Small Intestine of Weaning Piglets
inferred← citeshttps://doi.org/10.1007/s00248-009-9495-yopenalex-snapshot
Bacterial Succession on the Leaf Surface: A Novel System for Studying Successional Dynamics
inferred← citeshttps://doi.org/10.1007/s00248-009-9517-9openalex-snapshot
The Biogeography of Ammonia-Oxidizing Bacterial Communities in Soil
inferred← citeshttps://doi.org/10.1007/s00248-009-9525-9openalex-snapshot
Habitat Heterogeneity and Associated Microbial Community Structure in a Small-Scale Floodplain Hyporheic Flow Path
inferred← citeshttps://doi.org/10.1007/s00248-010-9742-2openalex-snapshot
Annual and Seasonal Variation in the Phyllosphere Bacterial Community Associated with Leaves of the Southern Magnolia (Magnolia grandiflora)
inferred← citeshttps://doi.org/10.1007/s00248-010-9775-6openalex-snapshot
Euxinic Freshwater Hypolimnia Promote Bacterial Endemicity in Continental Areas
inferred← citeshttps://doi.org/10.1007/s00248-010-9782-7openalex-snapshot
Bacterial Community Structure Along Moisture Gradients in the Parafluvial Sediments of Two Ephemeral Desert Streams
inferred← citeshttps://doi.org/10.1007/s00248-011-0005-7openalex-snapshot
Phylogenetic Analysis Suggests That Habitat Filtering Is Structuring Marine Bacterial Communities Across the Globe
inferred← citeshttps://doi.org/10.1007/s00248-011-9855-2openalex-snapshot
Diversity and Spatial Distribution of Prokaryotic Communities Along A Sediment Vertical Profile of A Deep-Sea Mud Volcano
inferred← citeshttps://doi.org/10.1007/s00248-011-9979-4openalex-snapshot
Comparative Geochemical and Microbiological Characterization of Two Thermal Pools in the Uzon Caldera, Kamchatka, Russia
inferred← citeshttps://doi.org/10.1007/s00248-011-9998-1openalex-snapshot
The Fibrobacteres: an Important Phylum of Cellulose-Degrading Bacteria
inferred← citeshttps://doi.org/10.1007/s00248-012-0049-3openalex-snapshot
Long-Term Characterization of Free-Living and Particle-Associated Bacterial Communities in Lake Tiefwaren Reveals Distinct Seasonal Patterns
inferred← citeshttps://doi.org/10.1007/s00248-012-0073-3openalex-snapshot
Bacterial Communities Associated with Production Facilities of Two Newly Drilled Thermogenic Natural Gas Wells in the Barnett Shale (Texas, USA)
inferred← citeshttps://doi.org/10.1007/s00248-012-0167-yopenalex-snapshot
Comparison of Soil Bacterial Communities of Pinus patula of Nilgiris, Western Ghats with Other Biogeographically Distant Pine Forest Clone Libraries
inferred← citeshttps://doi.org/10.1007/s00248-013-0336-7openalex-snapshot
The Temporal Scaling of Bacterioplankton Composition: High Turnover and Predictability during Shrimp Cultivation
inferred← citeshttps://doi.org/10.1007/s00248-014-0388-3openalex-snapshot
Phylogenetic and Functional Analysis of Gut Microbiota of a Fungus-Growing Higher Termite: Bacteroidetes from Higher Termites Are a Rich Source of β-Glucosidase Genes
inferred← citeshttps://doi.org/10.1007/s00248-016-0910-xopenalex-snapshot
The Underlying Ecological Processes of Gut Microbiota Among Cohabitating Retarded, Overgrown and Normal Shrimp
inferred← citeshttps://doi.org/10.1007/s00248-017-1120-xopenalex-snapshot
Diversity and Cyclical Seasonal Transitions in the Bacterial Community in a Large and Deep Perialpine Lake
inferred← citeshttps://doi.org/10.1007/s00248-022-02065-xopenalex-snapshot
Distinct and Temporally Stable Assembly Mechanisms Shape Bacterial and Fungal Communities in Vineyard Soils
inferred← citeshttps://doi.org/10.1007/s00248-024-02368-1openalex-snapshot
Bats, Bacteria, and Bat Smell V.2.0: Repeatable Sex-Specific Differences in Scent Organ Microbiota
inferred← citeshttps://doi.org/10.1007/s00253-011-3296-1openalex-snapshot
A diverse bacterial community in an anoxic quinoline-degrading bioreactor determined by using pyrosequencing and clone library analysis
inferred← citeshttps://doi.org/10.1007/s00253-011-3388-yopenalex-snapshot
Development and characterization of DehaloR^2, a novel anaerobic microbial consortium performing rapid dechlorination of TCE to ethene
inferred← citeshttps://doi.org/10.1007/s00253-012-4669-9openalex-snapshot
The effect of toxic malachite green on the bacterial community in Antarctic soil and the physiology of malachite green-degrading Pseudomonas sp. MGO
inferred← citeshttps://doi.org/10.1007/s00253-013-4906-xopenalex-snapshot
The effect of corrosion inhibitors on microbial communities associated with corrosion in a model flow cell system
inferred← citeshttps://doi.org/10.1007/s00253-016-7839-3openalex-snapshot
Bacterial communities involved in sulfur transformations in wastewater treatment plants
inferred← citeshttps://doi.org/10.1007/s00253-019-09817-9openalex-snapshot
Phosphate depletion controls lipid content and accumulation of heterotrophic bacteria during growth of Synechocystis sp. PCC 6803
inferred← citeshttps://doi.org/10.1007/s00253-019-10307-1openalex-snapshot
Berberine ameliorates colonic damage accompanied with the modulation of dysfunctional bacteria and functions in ulcerative colitis rats
inferred← citeshttps://doi.org/10.1007/s00253-021-11563-wopenalex-snapshot
Integrative analysis identifies the quality advantage and corresponding regulatory mechanism of paddy field–cultured crayfish (Procambarus clarkii)
inferred← citeshttps://doi.org/10.1007/s00253-022-11980-5openalex-snapshot
Comparative and analytical characterization of the oral bacteriome of smokeless tobacco users with oral squamous cell carcinoma
inferred← citeshttps://doi.org/10.1007/s00284-008-9267-9openalex-snapshot
Phylogenetic Placement of Pentatomid Stink Bug Gut Symbionts
inferred← citeshttps://doi.org/10.1007/s00284-011-0030-2openalex-snapshot
Association of the Genus Acinetobacter with the Decomposition of a Swine Carcass and the Isolation and Characterization of a Novel Strain of Acinetobacter sp. P4
inferred← citeshttps://doi.org/10.1007/s00284-012-0120-9openalex-snapshot
Comparative Phylogenies of Ribosomal Proteins and the 16S rRNA Gene at Higher Ranks of the Class Actinobacteria
inferred← citeshttps://doi.org/10.1007/s00284-014-0643-3openalex-snapshot
Microbial Sequencing Analyses Suggest the Presence of a Fecal Veneer on Indoor Climbing Wall Holds
inferred← citeshttps://doi.org/10.1007/s00284-022-03017-xopenalex-snapshot
Anthocyanin Addition to Kefir: Metagenomic Analysis of Microbial Community Structure
inferred← citeshttps://doi.org/10.1007/s00300-011-1084-0openalex-snapshot
Assessment of soil bacterial communities on Alexander Island (in the maritime and continental Antarctic transitional zone)
inferred← citeshttps://doi.org/10.1007/s00374-011-0561-5openalex-snapshot
Microbial communities on litter of managed and abandoned alpine pastureland
inferred← citeshttps://doi.org/10.1007/s00572-020-00963-xopenalex-snapshot
Arbuscular mycorrhizal fungus inocula from coastal sand dunes arrest olive cutting growth under salinity stress
inferred← citeshttps://doi.org/10.1007/s00592-020-01669-4openalex-snapshot
Fecal microbiota signatures of insulin resistance, inflammation, and metabolic syndrome in youth with obesity: a pilot study
inferred← citeshttps://doi.org/10.1007/s00792-014-0657-6openalex-snapshot
Geochemistry and microbial ecology in alkaline hot springs of Ambitle Island, Papua New Guinea
inferred← citeshttps://doi.org/10.1007/s10068-012-0119-9openalex-snapshot
Differentiation of lactic acid bacteria based on RFLP analysis of the tuf gene
inferred← citeshttps://doi.org/10.1007/s10096-020-03854-3openalex-snapshot
Effect of Saccharomyces boulardii CNCM I-745 as complementary treatment of Helicobacter pylori infection on gut microbiome
inferred← citeshttps://doi.org/10.1007/s10295-009-0653-5openalex-snapshot
Variations of bacterial 16S rDNA phylotypes prior to and after chlorination for drinking water production from two surface water treatment plants
inferred← citeshttps://doi.org/10.1007/s10452-012-9417-9openalex-snapshot
Succession in the aquatic Sarracenia purpurea community: deterministic or driven by contingency?
inferred← citeshttps://doi.org/10.1007/s10482-011-9676-9openalex-snapshot
Diversity and distribution of the bioactive actinobacterial genus Salinispora from sponges along the Great Barrier Reef
inferred← citeshttps://doi.org/10.1007/s10482-012-9821-0openalex-snapshot
Barcoded pyrosequencing analysis of the microbial community in a simulator of the human gastrointestinal tract showed a colon region-specific microbiota modulation for two plant-derived polysaccharide blends
inferred← citeshttps://doi.org/10.1007/s10482-012-9832-xopenalex-snapshot
Halomonas cibimaris sp. nov., isolated from jeotgal, a traditional Korean fermented seafood
inferred← citeshttps://doi.org/10.1007/s10482-013-0003-5openalex-snapshot
Isolation and diversity of planctomycetes from the sponge Niphates sp., seawater, and sediment of Moreton Bay, Australia
inferred← citeshttps://doi.org/10.1007/s10482-016-0698-1openalex-snapshot
Analysis of the microbial diversity in faecal material of the endangered blue whale, Balaenoptera musculus
inferred← citeshttps://doi.org/10.1007/s10482-016-0731-4openalex-snapshot
Vertical variation of bacterial community in Nam Co, a large stratified lake in central Tibetan Plateau
inferred← citeshttps://doi.org/10.1007/s10532-008-9216-0openalex-snapshot
Isolation of a Xanthobacter sp. degrading dichloromethane and characterization of the gene involved in the degradation
inferred← citeshttps://doi.org/10.1007/s10532-011-9533-6openalex-snapshot
Growth of Acinetobacter gerneri P7 on polyurethane and the purification and characterization of a polyurethanase enzyme
inferred← citeshttps://doi.org/10.1007/s10532-012-9572-7openalex-snapshot
Bioremediation of high molecular weight polyaromatic hydrocarbons co-contaminated with metals in liquid and soil slurries by metal tolerant PAHs degrading bacterial consortium
inferred← citeshttps://doi.org/10.1007/s10532-017-9791-zopenalex-snapshot
Changes in the microbial community during repeated anaerobic microbial dechlorination of pentachlorophenol
inferred← citeshttps://doi.org/10.1007/s10620-020-06729-xopenalex-snapshot
Vancomycin-Induced Changes in Host Immunity and Behavior: Comparative Genomic and Metagenomic Analysis in C57BL/6 and BALB/c Mice
inferred← citeshttps://doi.org/10.1007/s10709-014-9768-3openalex-snapshot
Molecular evolution and sequence divergence of plant chalcone synthase and chalcone synthase-Like genes
inferred← citeshttps://doi.org/10.1007/s11104-008-9855-2openalex-snapshot
Nitrogen-fixing bacteria communities occurring in soils under different uses in the Western Amazon Region as indicated by nodulation of siratro (Macroptilium atropurpureum)
inferred← citeshttps://doi.org/10.1007/s11104-011-1023-4openalex-snapshot
The contribution of nitrogen fixation to sugarcane (Saccharum officinarum L.), and the identification and characterization of part of the associated diazotrophic bacterial community
inferred← citeshttps://doi.org/10.1007/s11104-015-2512-7openalex-snapshot
Assessment of functional diversity and structure of phytate-hydrolysing bacterial community in Lolium perenne rhizosphere
inferred← citeshttps://doi.org/10.1007/s11104-016-2813-5openalex-snapshot
Endophytic colonization of sugarcane (Saccharum officinarum) by the novel diazotrophs Shinella sp. UYSO24 and Enterobacter sp. UYSO10
inferred← citeshttps://doi.org/10.1007/s11104-025-07553-wopenalex-snapshot
Keystone microbial phylotypes support plant productivity along a gradient of degradation in alpine wetlands of Tibetan Plateau
inferred← citeshttps://doi.org/10.1007/s11270-019-4237-3openalex-snapshot
Effects of Mn(II) on the Oxidation of Fe in Soils and the Uptake of Cadmium by Rice (Oryza sativa)
inferred← citeshttps://doi.org/10.1007/s11274-009-0033-3openalex-snapshot
Could nested PCR be applicable for the study of microbial diversity?
inferred← citeshttps://doi.org/10.1007/s11274-010-0326-6openalex-snapshot
Biogeography of diazotrophic bacteria in soils
inferred← citeshttps://doi.org/10.1007/s11274-020-02812-7openalex-snapshot
Bioprospecting potential of microbial communities in solid waste landfills for novel enzymes through metagenomic approach
inferred← citeshttps://doi.org/10.1007/s11356-013-1850-3openalex-snapshot
Metal-tolerant PAH-degrading bacteria: development of suitable test medium and effect of cadmium and its availability on PAH biodegradation
inferred← citeshttps://doi.org/10.1007/s11356-016-7562-8openalex-snapshot
Shifts in indigenous microbial communities during the anaerobic degradation of pentachlorophenol in upland and paddy soils from southern China
inferred← citeshttps://doi.org/10.1007/s11356-017-0945-7openalex-snapshot
Characterization of multiple antibiotic resistance of culturable microorganisms and metagenomic analysis of total microbial diversity of marine fish sold in retail shops in Mumbai, India
inferred← citeshttps://doi.org/10.1007/s11356-017-9112-4openalex-snapshot
Syntrophic association and performance of Clostridium, Desulfovibrio, Aeromonas and Tetrathiobacter as anodic biocatalysts for bioelectricity generation in dual chamber microbial fuel cell
inferred← citeshttps://doi.org/10.1007/s11356-018-2987-xopenalex-snapshot
Characterization of bacterial and microbial eukaryotic communities associated with an ephemeral hypoxia event in Taihu Lake, a shallow eutrophic Chinese lake
inferred← citeshttps://doi.org/10.1007/s11356-020-08818-wopenalex-snapshot
High heterogeneity of bacterioplankton community shaped by spatially structured environmental factors in West Lake, a typical urban lake in eastern China
inferred← citeshttps://doi.org/10.1007/s11368-025-04184-7openalex-snapshot
Flooding-drainage regulates arsenic transformation and its associated microbial dynamics in paddy soil amended with ferrihydrite
inferred← citeshttps://doi.org/10.1007/s11390-012-1219-yopenalex-snapshot
Computational Challenges in Characterization of Bacteria and Bacteria-Host Interactions Based on Genomic Data
inferred← citeshttps://doi.org/10.1007/s11802-020-4464-7openalex-snapshot
In situ Assemblies of Bacteria and Nutrient Dynamics in Response to an Ecosystem Engineer, Marine Clam Scapharca subcrenata, in the Sediment of an Aquaculture Bioremediation System
inferred← citeshttps://doi.org/10.1007/s12038-012-9244-0openalex-snapshot
Molecular analysis of gut microbiota in obesity among Indian individuals
inferred← citeshttps://doi.org/10.1007/s12223-010-0081-yopenalex-snapshot
Bacterial community composition of the gut microbiota of Cylindroiulus fulviceps (diplopoda) as revealed by molecular fingerprinting and cloning
inferred← citeshttps://doi.org/10.1007/s12223-012-0155-0openalex-snapshot
Low sequencing efforts bias analyses of shared taxa in microbial communities
inferred← citeshttps://doi.org/10.1007/s12275-011-1205-zopenalex-snapshot
Comparative approach to capture bacterial diversity of coastal waters
inferred← citeshttps://doi.org/10.1007/s12275-016-6294-2openalex-snapshot
Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra
inferred← citeshttps://doi.org/10.1007/s12551-020-00724-2openalex-snapshot
Challenges and emerging systems biology approaches to discover how the human gut microbiome impact host physiology
inferred← citeshttps://doi.org/10.1007/s12613-018-1570-2openalex-snapshot
Linking leach chemistry and microbiology of low-grade copper ore bioleaching at different temperatures
inferred← citeshttps://doi.org/10.1007/s13157-014-0560-zopenalex-snapshot
Diversity of Desulfobacteriaceae and Overall Activity of Sulfate-Reducing Microorganisms in and Around a Salt pan in a Southern California Coastal Wetland
inferred← citeshttps://doi.org/10.1007/s13199-011-0125-3openalex-snapshot
Diversity and novelty of the gut microbial community of an herbivorous rodent (Neotoma bryanti)
inferred← citeshttps://doi.org/10.1007/s13205-021-02770-3openalex-snapshot
Impact of pesticide/fertilizer mixtures on the rhizosphere microbial community of field-grown sugarcane
inferred← citeshttps://doi.org/10.1007/s42690-023-01006-6openalex-snapshot
Characterization of tasar silkworm Antheraea mylitta drury (Saturniidae: Lepidoptera) midgut bacterial symbionts through metagenomic analysis
inferred← citeshttps://doi.org/10.1007/s42832-021-0122-2openalex-snapshot
Strong partitioning of soil bacterial community composition and co-occurrence networks along a small-scale elevational gradient on Zijin Mountain
inferred← citeshttps://doi.org/10.1016/b978-0-12-405926-9.00014-9openalex-snapshot
Advances in Machine Learning for Processing and Comparison of Metagenomic Data
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20503-7openalex-snapshot
Profiling the Gut Microbiome: Practice and Potential
inferred← citeshttps://doi.org/10.1016/b978-0-443-31550-3.00011-1openalex-snapshot
Computational biology methods and their application to comparative genomics
inferred← citeshttps://doi.org/10.1016/b978-0-444-62650-9.00004-xopenalex-snapshot
Applications of Next-Generation Sequencing Technologies to the Study of the Human Microbiome
inferred← citeshttps://doi.org/10.1016/j.agee.2019.106578openalex-snapshot
Variations in soil bacterial taxonomic profiles and putative functions in response to straw incorporation combined with N fertilization during the maize growing season
inferred← citeshttps://doi.org/10.1016/j.algal.2016.05.001openalex-snapshot
Multiple synergistic benefits of selective fermentation of Scenedesmus biomass for fuel recovery via wet-biomass extraction
inferred← citeshttps://doi.org/10.1016/j.anaerobe.2010.04.002openalex-snapshot
The genus Prevotella in cystic fibrosis airways
inferred← citeshttps://doi.org/10.1016/j.apsoil.2016.01.014openalex-snapshot
Short-term effects of mechanical drainage on fungal and bacterial community structure in a managed grassland soil
inferred← citeshttps://doi.org/10.1016/j.apsoil.2016.08.005openalex-snapshot
Bacterial community composition is shaped by soil secondary salinization and acidification brought on by high nitrogen fertilization rates
inferred← citeshttps://doi.org/10.1016/j.apsoil.2017.01.007openalex-snapshot
Changes of bacterial community compositions after three years of biochar application in a black soil of northeast China
inferred← citeshttps://doi.org/10.1016/j.apsoil.2017.07.013openalex-snapshot
Distinct soil bacterial communities in response to the cropping system in a Mollisol of northeast China
inferred← citeshttps://doi.org/10.1016/j.aqrep.2023.101907openalex-snapshot
The impact of mariculture biofilters on the distribution of benthic nutrient fluxes, organic matters and bacterial community in a mariculture wastewater treatment system
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2011.01.020openalex-snapshot
Differences in bacterial community composition in Baltic Sea sediment in response to fish farming
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2018.07.053openalex-snapshot
Succession of bacterioplankton community in intensive shrimp (Litopenaeus vannamei) aquaculture systems
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2018.09.031openalex-snapshot
Vibrio alginolyticus infection induces coupled changes of bacterial community and metabolic phenotype in the gut of swimming crab
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2018.12.020openalex-snapshot
Intestinal homeostasis of juvenile tiger puffer Takifugu rubripes was sensitive to dietary arachidonic acid in terms of mucosal barrier and microbiota
inferred← citeshttps://doi.org/10.1016/j.aspen.2016.03.007openalex-snapshot
Bacterial communities associated with the gut of tomato fruit borer, Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) based on Illumina Next-Generation Sequencing
inferred← citeshttps://doi.org/10.1016/j.bcab.2019.101249openalex-snapshot
High-throughput sequencing approach to access the impact of nanozeolite treatment on species richness and evenness of soil metagenome
inferred← citeshttps://doi.org/10.1016/j.bej.2017.01.014openalex-snapshot
Effect of cathode environment on bioelectricity generation using a novel consortium in anode side of a microbial fuel cell
inferred← citeshttps://doi.org/10.1016/j.biopha.2019.109131openalex-snapshot
RETRACTED: Effects of berberine and metformin on intestinal inflammation and gut microbiome composition in db/db mice
inferred← citeshttps://doi.org/10.1016/j.biortech.2008.12.043openalex-snapshot
Hydrolysis of fenamiphos and its toxic oxidation products by Microbacterium sp. in pure culture and groundwater
inferred← citeshttps://doi.org/10.1016/j.biortech.2010.11.119openalex-snapshot
A meta-analysis of the microbial diversity observed in anaerobic digesters
inferred← citeshttps://doi.org/10.1016/j.biortech.2011.05.035openalex-snapshot
Performance and spatial community succession of an anaerobic baffled reactor treating acetone–butanol–ethanol fermentation wastewater
inferred← citeshttps://doi.org/10.1016/j.biortech.2011.09.114openalex-snapshot
Performance and bacterial compositions of aged refuse reactors treating mature landfill leachate
inferred← citeshttps://doi.org/10.1016/j.biortech.2013.10.059openalex-snapshot
Continuous syngas fermentation for the production of ethanol, n-propanol and n-butanol
inferred← citeshttps://doi.org/10.1016/j.biortech.2019.122550openalex-snapshot
Assessment of bacterial and fungal communities in a full-scale thermophilic sewage sludge composting pile under a semipermeable cover
inferred← citeshttps://doi.org/10.1016/j.biortech.2020.123965openalex-snapshot
Pyophage cocktail for the biocontrol of membrane fouling and its effect in aerobic microbial biofilm community during the treatment of antibiotics
inferred← citeshttps://doi.org/10.1016/j.biortech.2025.133107openalex-snapshot
Enhancing propionic acid formation and biogas yield from grass silage via co-fermentation of Pediococcus acidilactici and Lentilactobacillus buchneri
inferred← citeshttps://doi.org/10.1016/j.catena.2010.05.007openalex-snapshot
Bacterial communities from soil sediments of a mountain oasis in northern Oman
inferred← citeshttps://doi.org/10.1016/j.cej.2014.07.136openalex-snapshot
Kinetic modeling and microbiological study of two-step nitrification in a membrane bioreactor and hybrid moving bed biofilm reactor–membrane bioreactor for wastewater treatment
inferred← citeshttps://doi.org/10.1016/j.cej.2015.04.137openalex-snapshot
Archaeal populations in full-scale autotrophic nitrogen removal bioreactors operated with different technologies: CANON, DEMON and partial nitritation/anammox
inferred← citeshttps://doi.org/10.1016/j.cej.2024.155889openalex-snapshot
Effect of powder activated carbon (PAC) addition on the performance of anaerobic dynamic membrane bioreactor (AnDMBR): Stratification analysis of dynamic membrane characteristics
inferred← citeshttps://doi.org/10.1016/j.chemgeo.2008.08.027openalex-snapshot
Biogeochemistry of iron oxidation in a circumneutral freshwater habitat
inferred← citeshttps://doi.org/10.1016/j.chemgeo.2011.03.015openalex-snapshot
Ralstonia species mediate Fe-oxidation in circumneutral, metal-rich subsurface fluids of Henderson mine, CO
inferred← citeshttps://doi.org/10.1016/j.chemgeo.2012.08.032openalex-snapshot
Impact of commercial natural gas production on geochemistry and microbiology in a shale-gas reservoir
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2011.07.021openalex-snapshot
Microbial community response to addition of polylactate compounds to stimulate hexavalent chromium reduction in groundwater
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2018.09.160openalex-snapshot
Response of microbial communities to different organochlorine pesticides (OCPs) contamination levels in contaminated soils
inferred← citeshttps://doi.org/10.1016/j.clnu.2020.07.021openalex-snapshot
Multi-omics data integration in anorexia nervosa patients before and after weight regain: A microbiome-metabolomics investigation
inferred← citeshttps://doi.org/10.1016/j.dld.2020.05.020openalex-snapshot
Towards a disease-associated common trait of gut microbiota dysbiosis: The pivotal role of Akkermansia muciniphila
inferred← citeshttps://doi.org/10.1016/j.dsr2.2010.11.021openalex-snapshot
Marine bacterioplankton biomass, activity and community structure in the vicinity of Antarctic icebergs
inferred← citeshttps://doi.org/10.1016/j.ebiom.2026.106475openalex-snapshot
A functional immune-based platform for donor-recipient matching in faecal microbiota transplantation for inflammatory bowel disease
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2018.03.043openalex-snapshot
Nutrient enrichment during shrimp cultivation alters bacterioplankton assemblies and destroys community stability
inferred← citeshttps://doi.org/10.1016/j.ecoleng.2017.08.017openalex-snapshot
Evaluation of Sedum as driver for plant microbial fuel cells in a semi-arid green roof ecosystem
inferred← citeshttps://doi.org/10.1016/j.ecoleng.2020.106089openalex-snapshot
Litter decomposition, microbial community dynamics and their relationships under seasonal snow cover
inferred← citeshttps://doi.org/10.1016/j.ecss.2012.07.010openalex-snapshot
Bacterial diversity of siliciclastic sediments in a Thalassia testudinum meadow and the implications for Lucinisca nassula chemosymbiosis
inferred← citeshttps://doi.org/10.1016/j.egg.2018.07.001openalex-snapshot
Inferences of gut bacterial diversity from next-generation sequencing of 16S rDNA in deep sea blind ray - Benthobatis moresbyi
inferred← citeshttps://doi.org/10.1016/j.egg.2020.100054openalex-snapshot
Illumina MiSeq based assessment of bacterial community structure and diversity along the heavy metal concentration gradient in Sukinda chromite mine area soils, India
inferred← citeshttps://doi.org/10.1016/j.envpol.2016.07.035openalex-snapshot
Successional trajectories of bacterioplankton community over the complete cycle of a sudden phytoplankton bloom in the Xiangshan Bay, East China Sea
inferred← citeshttps://doi.org/10.1016/j.envpol.2019.06.019openalex-snapshot
Sediment pH, not the bacterial diversity, determines Escherichia coli O157:H7 survival in estuarine sediments
inferred← citeshttps://doi.org/10.1016/j.envpol.2020.113989openalex-snapshot
Mitigation effects of the microbial fuel cells on heavy metal accumulation in rice (Oryza sativa L.)
inferred← citeshttps://doi.org/10.1016/j.envpol.2023.121104openalex-snapshot
Seasonal fluctuation of water quality and ecogenomic phylogeny of novel potential microbial pollution indicators of Veshaw River Kashmir-Western Himalaya
inferred← citeshttps://doi.org/10.1016/j.envres.2025.122614openalex-snapshot
Chemical and bio-hazard assessment of swine manure valorisation: antibiotic and antibiotic-resistant bacteria screening
inferred← citeshttps://doi.org/10.1016/j.fm.2014.08.023openalex-snapshot
Bacterial diversity in typical Italian salami at different ripening stages as revealed by high-throughput sequencing of 16S rRNA amplicons
inferred← citeshttps://doi.org/10.1016/j.foodres.2021.110327openalex-snapshot
A new Leuconostoc citreum strain discovered in the traditional sweet potato sour liquid fermentation as a novel bioflocculant for highly efficient starch production
inferred← citeshttps://doi.org/10.1016/j.foodres.2023.112960openalex-snapshot
A gluten degrading probiotic Bacillus subtilis LZU-GM relieve adverse effect of gluten additive food and balances gut microbiota in mice
inferred← citeshttps://doi.org/10.1016/j.foodres.2024.115653openalex-snapshot
The role of apricot kernels in shaping the microbial community composition during Massa Medicata Fermentata fermentation
inferred← citeshttps://doi.org/10.1016/j.forsciint.2021.110886openalex-snapshot
Assessment of the exclusion potential of suspects by using microbial signature in sexual assault cases: A scenario-based experimental study
inferred← citeshttps://doi.org/10.1016/j.fsi.2017.07.054openalex-snapshot
Interplay between the gut microbiota and immune responses of ayu (Plecoglossus altivelis) during Vibrio anguillarum infection
inferred← citeshttps://doi.org/10.1016/j.fsi.2019.03.063openalex-snapshot
The microbiota profile and transcriptome analysis of immune response during metamorphosis stages in orange spotted grouper (Epinephelus coioides)
inferred← citeshttps://doi.org/10.1016/j.gca.2015.09.011openalex-snapshot
Coexistence of Fe(II)- and Mn(II)-oxidizing bacteria govern the formation of deep sea umber deposits
inferred← citeshttps://doi.org/10.1016/j.gene.2015.10.032openalex-snapshot
Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea
inferred← citeshttps://doi.org/10.1016/j.hydromet.2016.07.007openalex-snapshot
Characterization of microbial community in industrial bioleaching heap of copper sulfide ore at Monywa mine, Myanmar
inferred← citeshttps://doi.org/10.1016/j.ibiod.2010.12.010openalex-snapshot
Characterization of an alkane-degrading methanogenic enrichment culture from production water of an oil reservoir after 274 days of incubation
inferred← citeshttps://doi.org/10.1016/j.ibiod.2019.05.004openalex-snapshot
Bioturbation of blood clam Tegillarca granosa on benthic nutrient fluxes and microbial community in an aquaculture wastewater treatment system
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2017.02.060openalex-snapshot
Structural modulation of gut microbiota during alleviation of antibiotic-associated diarrhea with herbal formula
inferred← citeshttps://doi.org/10.1016/j.ijfoodmicro.2010.01.008openalex-snapshot
Molecular analysis of bacterial population structure and dynamics during cold storage of untreated and treated milk
inferred← citeshttps://doi.org/10.1016/j.ijfoodmicro.2015.04.047openalex-snapshot
High-throughput assessment of bacterial ecology in hog, cow and ovine casings used in sausages production
inferred← citeshttps://doi.org/10.1016/j.ijfoodmicro.2016.09.030openalex-snapshot
Pyrosequencing analysis of the microbiota of kusaya gravy obtained from Izu Islands
inferred← citeshttps://doi.org/10.1016/j.ijmm.2010.02.005openalex-snapshot
Endotracheal tube biofilm inoculation of oral flora and subsequent colonization of opportunistic pathogens
inferred← citeshttps://doi.org/10.1016/j.immuni.2026.05.001openalex-snapshot
Dietary sulfur amino acids enhance anti-tumor immunity in colon cancer via an NKT cell-XCL1-cDC1 circuit
inferred← citeshttps://doi.org/10.1016/j.jaci.2010.10.048openalex-snapshot
Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
inferred← citeshttps://doi.org/10.1016/j.jare.2023.08.003openalex-snapshot
Auricularia auricula polysaccharides attenuate obesity in mice through gut commensal Papillibacter cinnamivorans
inferred← citeshttps://doi.org/10.1016/j.jaridenv.2012.05.004openalex-snapshot
Bacterial diversity of bryophyte-dominant biological soil crusts and associated mites
inferred← citeshttps://doi.org/10.1016/j.jbiosc.2011.09.015openalex-snapshot
Phylogenetic diversity of microbial communities associated with the crude-oil, large-insoluble-particle and formation-water components of the reservoir fluid from a non-flooded high-temperature petroleum reservoir
inferred← citeshttps://doi.org/10.1016/j.jbiotec.2013.07.004openalex-snapshot
Phoenix 2: A locally installable large-scale 16S rRNA gene sequence analysis pipeline with Web interface
inferred← citeshttps://doi.org/10.1016/j.jbiotec.2017.05.013openalex-snapshot
Potential of fecal waste for the production of biomethane, bioethanol and biodiesel
inferred← citeshttps://doi.org/10.1016/j.jbiotec.2017.06.1198openalex-snapshot
25 years of serving the community with ribosomal RNA gene reference databases and tools
inferred← citeshttps://doi.org/10.1016/j.jembe.2017.06.006openalex-snapshot
Distinct bacterial community and diversity shifts after phytoplankton-derived dissolved organic matter addition in a coastal environment
inferred← citeshttps://doi.org/10.1016/j.jff.2020.104053openalex-snapshot
Dietary organic cranberry pomace influences multiple blood biochemical parameters and cecal microbiota in pasture-raised broiler chickens
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2012.10.038openalex-snapshot
Intrinsic rates of petroleum hydrocarbon biodegradation in Gulf of Mexico intertidal sandy sediments and its enhancement by organic substrates
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2017.07.063openalex-snapshot
Biochar accelerates microbial reductive debromination of 2,2′,4,4′-tetrabromodiphenyl ether (BDE-47) in anaerobic mangrove sediments
showing the first 200 of 990 · page through all 990
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.