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SmedGD: the Schmidtea mediterranea genome database

https://doi.org/10.1093/nar/gkm684
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/prot.21356openalex-snapshot
Strategies for the effective identification of remotely related sequences in multiple PSSM search approach
inferredcites →https://doi.org/10.1016/j.cell.2006.01.012openalex-snapshot
Planarian Regeneration: Its End Is Its Beginning
inferredcites →https://doi.org/10.1016/j.devcel.2005.02.014openalex-snapshot
Identification of Genes Needed for Regeneration, Stem Cell Function, and Tissue Homeostasis by Systematic Gene Perturbation in Planaria
inferredcites →https://doi.org/10.1038/nrg1923openalex-snapshot
Bridging the regeneration gap: genetic insights from diverse animal models
inferredcites →https://doi.org/10.1073/pnas.0509507102openalex-snapshot
The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: Analysis of ESTs from the hermaphroditic strain
inferredcites →https://doi.org/10.1073/pnas.1834205100openalex-snapshot
Ingestion of bacterially expressed double-stranded RNA inhibits gene expression in planarians
inferredcites →https://doi.org/10.1093/nar/27.1.229openalex-snapshot
SMART: identification and annotation of domains from signalling and extracellular protein sequences
inferredcites →https://doi.org/10.1093/nar/30.1.276openalex-snapshot
The Pfam Protein Families Database
inferredcites →https://doi.org/10.1093/nar/gkg095openalex-snapshot
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
inferredcites →https://doi.org/10.1093/nar/gkh021openalex-snapshot
The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology
inferredcites →https://doi.org/10.1093/nar/gkh121openalex-snapshot
The Pfam protein families database
inferredcites →https://doi.org/10.1093/nar/gkh435openalex-snapshot
BLAST: at the core of a powerful and diverse set of sequence analysis tools
inferredcites →https://doi.org/10.1093/nar/gki106openalex-snapshot
InterPro, progress and status in 2005
inferredcites →https://doi.org/10.1093/nar/gki158openalex-snapshot
A large-scale analysis of mRNA polyadenylation of human and mouse genes
inferredcites →https://doi.org/10.1093/nar/gkl776openalex-snapshot
BeetleBase: the model organism database for Tribolium castaneum
inferredcites →https://doi.org/10.1093/nar/gkl777openalex-snapshot
ParameciumDB: a community resource that integrates the Paramecium tetraurelia genome sequence with genetic data
inferredcites →https://doi.org/10.1093/nar/gkl951openalex-snapshot
CDD: a conserved domain database for interactive domain family analysis
inferredcites →https://doi.org/10.1093/nar/gnh003openalex-snapshot
Impedance-based detection of DNA sequences using a silicon transducer with PNA as the probe layer
inferredcites →https://doi.org/10.1101/gr.229202openalex-snapshot
BLAT —The BLAST -Like Alignment Tool
inferredcites →https://doi.org/10.1101/gr.361602openalex-snapshot
The Bioperl Toolkit: Perl Modules for the Life Sciences
inferredcites →https://doi.org/10.1101/gr.403602openalex-snapshot
The Generic Genome Browser: A Building Block for a Model Organism System Database
inferredcites →https://doi.org/10.1101/gr.461403openalex-snapshot
The Gene Ontology Annotation (GOA) Project: Implementation of GO in SWISS-PROT, TrEMBL, and InterPro
inferredcites →https://doi.org/10.1101/gr.5145806openalex-snapshot
Gene discovery and annotation using LCM-454 transcriptome sequencing
inferredcites →https://doi.org/10.1101/gr.6743907openalex-snapshot
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
inferredcites →https://doi.org/10.1101/gr.9.9.868openalex-snapshot
CAP3: A DNA Sequence Assembly Program
inferredcites →https://doi.org/10.1186/gb-2002-3-12-research0082openalex-snapshot
Apollo: a sequence annotation editor
inferredcites →https://doi.org/10.1186/gb-2005-6-5-r44openalex-snapshot
The Sequence Ontology: a tool for the unification of genome annotations
inferredcites →https://doi.org/10.1242/dev.00167openalex-snapshot
The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration
inferredcites →https://doi.org/10.1261/rna.117206openalex-snapshot
MicroRNAs from the Planarian Schmidtea mediterranea: A model system for stem cell biology
inferredcites →https://doi.org/10.1371/journal.pbio.0020309openalex-snapshot
Textpresso: An Ontology-Based Information Retrieval and Extraction System for Biological Literature

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Dugesia hepta and Dugesia benazzii (Platyhelminthes: Tricladida): two sympatric species with occasional sex?
inferred← citeshttps://doi.org/10.1002/9783527652969.ch20openalex-snapshot
Drug Discovery for Trematodiases: Challenges and Progress
inferred← citeshttps://doi.org/10.1002/cpz1.637openalex-snapshot
New Worm on the Block: Planarians in (Neuro)Toxicology
inferred← citeshttps://doi.org/10.1002/dvdy.22427openalex-snapshot
The use of lectins as markers for differentiated secretory cells in planarians
inferred← citeshttps://doi.org/10.1002/dvdy.23775openalex-snapshot
A Lissencephaly‐1 homologue is essential for mitotic progression in the planarian Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1002/dvg.22872openalex-snapshot
SmedGD 2.0: The Schmidtea mediterranea genome database
inferred← citeshttps://doi.org/10.1002/jez.b.21383openalex-snapshot
Developmental transcriptome ofAplysia californica'
inferred← citeshttps://doi.org/10.1002/jmor.21756openalex-snapshot
Morphometric analysis and functional insights into the serotonergic system of Girardia tigrina (Tricladida, Platyhelminthes)
inferred← citeshttps://doi.org/10.1002/pmic.201200397openalex-snapshot
Understanding regeneration through proteomics
inferred← citeshttps://doi.org/10.1002/reg2.52openalex-snapshot
Planarian brain regeneration as a model system for developmental neurotoxicology
inferred← citeshttps://doi.org/10.1002/reg2.61openalex-snapshot
Temporal regulation of planarian eye regeneration
inferred← citeshttps://doi.org/10.1002/wdev.82openalex-snapshot
The history and enduring contributions of planarians to the study of animal regeneration
inferred← citeshttps://doi.org/10.1007/978-1-0716-1661-1_10openalex-snapshot
Analysis of Morphogenesis and Flagellar Assembly During Spermatogenesis in Planarian Flatworms
inferred← citeshttps://doi.org/10.1007/978-1-4020-8274-0_4openalex-snapshot
Stem Cells in Planarian
inferred← citeshttps://doi.org/10.1007/978-1-4939-7802-1_13openalex-snapshot
RNA In Situ Hybridization on Planarian Paraffin Sections
inferred← citeshttps://doi.org/10.1007/978-1-4939-7802-1_20openalex-snapshot
Clonal Analysis of Planarian Stem Cells by Subtotal Irradiation and Single-Cell Transplantation
inferred← citeshttps://doi.org/10.1007/978-1-4939-7802-1_5openalex-snapshot
Culturing Planarians in the Laboratory
inferred← citeshttps://doi.org/10.1007/978-1-62703-119-6_17openalex-snapshot
Design of RNAi Reagents for Invertebrate Model Organisms and Human Disease Vectors
inferred← citeshttps://doi.org/10.1007/978-90-481-2770-2_18openalex-snapshot
Sex in Parthenogenetic Planarians: Phylogenetic Relic or Evolutionary Resurrection?
inferred← citeshttps://doi.org/10.1007/s00239-020-09949-xopenalex-snapshot
Spiralian Genomes Reveal Gene Family Expansions Associated with Adaptation to Freshwater
inferred← citeshttps://doi.org/10.1007/s00427-012-0426-4openalex-snapshot
Stem cell systems and regeneration in planaria
inferred← citeshttps://doi.org/10.1007/s00427-015-0494-3openalex-snapshot
Protein expression profiling in head fragments during planarian regeneration after amputation
inferred← citeshttps://doi.org/10.1007/s00436-016-5079-1openalex-snapshot
The omic approach to parasitic trematode research—a review of techniques and developments within the past 5 years
inferred← citeshttps://doi.org/10.1007/s00709-011-0326-xopenalex-snapshot
The cell biology of schistosomes: a window on the evolution of the early metazoa
inferred← citeshttps://doi.org/10.1007/s10158-012-0132-yopenalex-snapshot
Biogenic amines and the control of neuromuscular signaling in schistosomes
inferred← citeshttps://doi.org/10.1007/s10158-013-0167-8openalex-snapshot
Galantamine reverses scopolamine-induced behavioral alterations in Dugesia tigrina
inferred← citeshttps://doi.org/10.1007/s10495-009-0445-4openalex-snapshot
Autophagy and apoptosis in planarians
inferred← citeshttps://doi.org/10.1007/s10495-009-0446-3openalex-snapshot
Apoptosis and its functional significance in molluscs
inferred← citeshttps://doi.org/10.1007/s10646-011-0809-8openalex-snapshot
Reference genes for qPCR assays in toxic metal and salinity stress in two flatworm model organisms
inferred← citeshttps://doi.org/10.1007/s11033-011-1018-5openalex-snapshot
Differential expression of microRNA patterns in planarian normal and regenerative tissues
inferred← citeshttps://doi.org/10.1007/s11033-012-1552-9openalex-snapshot
cDNA cloning of heat shock protein 90 gene and protein expression pattern in response to heavy metal exposure and thermal stress in planarian Dugesia japonica
inferred← citeshttps://doi.org/10.1007/s11033-012-2485-zopenalex-snapshot
Deep sequencing identifies regulated small RNAs in Dugesia japonica
inferred← citeshttps://doi.org/10.1007/s11064-015-1512-6openalex-snapshot
Evidence of Nicotine-Induced, Curare-Insensitive, Behavior in Planarians
inferred← citeshttps://doi.org/10.1007/s12217-012-9317-6openalex-snapshot
Space Research Program on Planarian Schmidtea Mediterranea’s Establishment of the Anterior-Posterior Axis in Altered Gravity Conditions
inferred← citeshttps://doi.org/10.1016/b978-0-12-391498-9.00004-8openalex-snapshot
Histone Modifications and Regeneration in the Planarian Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1016/b978-0-12-397944-5.00012-2openalex-snapshot
Analysis of Ciliary Assembly and Function in Planaria
inferred← citeshttps://doi.org/10.1016/bs.ctdb.2019.04.001openalex-snapshot
From worm to germ: Germ cell development and regeneration in planarians
inferred← citeshttps://doi.org/10.1016/bs.ctdb.2021.12.018openalex-snapshot
Sifting through the mud: A tale of building the annelid Capitella teleta for EvoDevo studies
inferred← citeshttps://doi.org/10.1016/bs.mcb.2015.01.009openalex-snapshot
The planarian Schmidtea mediterranea as a model for studying motile cilia and multiciliated cells
inferred← citeshttps://doi.org/10.1016/j.actatropica.2012.05.010openalex-snapshot
Identification of novel glutathione transferases in Echinococcus granulosus. An evolutionary perspective
inferred← citeshttps://doi.org/10.1016/j.ajhg.2013.08.015openalex-snapshot
Zebrafish Ciliopathy Screen Plus Human Mutational Analysis Identifies C21orf59 and CCDC65 Defects as Causing Primary Ciliary Dyskinesia
inferred← citeshttps://doi.org/10.1016/j.bbamcr.2016.10.010openalex-snapshot
Utilizing the planarian voltage-gated ion channel transcriptome to resolve a role for a Ca 2+ channel in neuromuscular function and regeneration
inferred← citeshttps://doi.org/10.1016/j.beproc.2023.104894openalex-snapshot
Conditioned place avoidance in the planaria Schmidtea mediterranea: A pre-clinical invertebrate model of anxiety-related disorders
inferred← citeshttps://doi.org/10.1016/j.cbpb.2014.03.001openalex-snapshot
Molecular characterization of the glucose-regulated protein 78 (GRP78) gene in planarian Dugesia japonica
inferred← citeshttps://doi.org/10.1016/j.ceca.2013.01.003openalex-snapshot
Characterization of a flatworm inositol (1,4,5) trisphosphate receptor (IP3R) reveals a role in reproductive physiology
inferred← citeshttps://doi.org/10.1016/j.celrep.2012.06.018openalex-snapshot
Transcriptome Analysis of the Planarian Eye Identifies ovo as a Specific Regulator of Eye Regeneration
inferred← citeshttps://doi.org/10.1016/j.celrep.2015.11.059openalex-snapshot
Set1 and MLL1/2 Target Distinct Sets of Functionally Different Genomic Loci In Vivo
inferred← citeshttps://doi.org/10.1016/j.chembiol.2010.11.012openalex-snapshot
A Chemical Genetics Approach Reveals H,K-ATPase-Mediated Membrane Voltage Is Required for Planarian Head Regeneration
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2020.126718openalex-snapshot
Dugesia japonica is the best suited of three planarian species for high-throughput toxicology screening
inferred← citeshttps://doi.org/10.1016/j.crvi.2011.03.009openalex-snapshot
Étude ultrastructurale de l’ovogenèse chez la planaire Schmidtea mediterranea (Plathelminthe, Paludicole)
inferred← citeshttps://doi.org/10.1016/j.crvi.2011.11.005openalex-snapshot
Ultrastructure of spermatogenesis and mature spermatozoon of the freshwater planarian Schmidtea mediterranea (Platyhelminthes, Paludicola)
inferred← citeshttps://doi.org/10.1016/j.dib.2016.11.022openalex-snapshot
Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2018.08.083openalex-snapshot
Molecular cloning, characterization, expression and enzyme activity of catalase from planarian Dugesia japonica in response to environmental pollutants
inferred← citeshttps://doi.org/10.1016/j.ejphar.2009.05.022openalex-snapshot
A cembranoid from tobacco prevents the expression of nicotine-induced withdrawal behavior in planarian worms
inferred← citeshttps://doi.org/10.1016/j.ejphar.2013.07.009openalex-snapshot
Riluzole attenuates the effects of chemoconvulsants acting on glutamatergic and GABAergic neurotransmission in the planarian Dugesia tigrina
inferred← citeshttps://doi.org/10.1016/j.envres.2025.122787openalex-snapshot
Bridging planarian bioassays and AOP-based environmental assessment: Toward mechanistic insights into pollutant-induced disruptions
inferred← citeshttps://doi.org/10.1016/j.fsi.2013.03.366openalex-snapshot
Two molluscan BCL-2 family members from Manila clam, Ruditapes philippinarum: Molecular characterization and immune responses
inferred← citeshttps://doi.org/10.1016/j.fsi.2015.04.031openalex-snapshot
Molecular profiles and pathogen-induced transcriptional responses of prawn B cell lymphoma-2 related ovarian killer protein (BOK)
inferred← citeshttps://doi.org/10.1016/j.gde.2009.05.003openalex-snapshot
Emerging patterns in planarian regeneration
inferred← citeshttps://doi.org/10.1016/j.gene.2013.09.101openalex-snapshot
Molecular cloning and characterization of SL3: A stem cell-specific SL RNA from the planarian Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1016/j.ijpara.2009.03.005openalex-snapshot
Discovery of multiple neuropeptide families in the phylum Platyhelminthes
inferred← citeshttps://doi.org/10.1016/j.ijpara.2009.10.002openalex-snapshot
Exposed proteins of the Schistosoma japonicum tegument
inferred← citeshttps://doi.org/10.1016/j.ijpara.2010.04.006openalex-snapshot
Histamine signalling in Schistosoma mansoni: Immunolocalisation and characterisation of a new histamine-responsive receptor (SmGPR-2)
inferred← citeshttps://doi.org/10.1016/j.ijpara.2016.05.007openalex-snapshot
De novo discovery of neuropeptides in the genomes of parasitic flatworms using a novel comparative approach
inferred← citeshttps://doi.org/10.1016/j.ijpara.2018.06.004openalex-snapshot
Analysis of classical neurotransmitter markers in tapeworms: Evidence for extensive loss of neurotransmitter pathways
inferred← citeshttps://doi.org/10.1016/j.ijpddr.2011.10.004openalex-snapshot
Parasite neuropeptide biology: Seeding rational drug target selection?
inferred← citeshttps://doi.org/10.1016/j.ijpddr.2014.09.007openalex-snapshot
Schistosome ABC multidrug transporters: From pharmacology to physiology
inferred← citeshttps://doi.org/10.1016/j.mod.2013.12.003openalex-snapshot
Planarian d-amino acid oxidase is involved in ovarian development during sexual induction
inferred← citeshttps://doi.org/10.1016/j.molbiopara.2010.11.009openalex-snapshot
Developmental expression of high molecular weight tropomyosin isoforms in Mesocestoides corti
inferred← citeshttps://doi.org/10.1016/j.molbiopara.2010.12.001openalex-snapshot
Glutamate-mediated signaling in Schistosoma mansoni: A novel glutamate receptor is expressed in neurons and the female reproductive tract
inferred← citeshttps://doi.org/10.1016/j.molbiopara.2011.11.005openalex-snapshot
Cytochrome P450 in fluke Opisthorchis felineus: Identification and characterization
inferred← citeshttps://doi.org/10.1016/j.molbiopara.2014.10.001openalex-snapshot
RNA interference in Fasciola hepatica newly excysted juveniles: Long dsRNA induces more persistent silencing than siRNA
inferred← citeshttps://doi.org/10.1016/j.neuroscience.2013.05.010openalex-snapshot
Planarians require an intact brain to behaviorally react to cocaine, but not to react to nicotine
inferred← citeshttps://doi.org/10.1016/j.ntt.2015.01.003openalex-snapshot
Ethanol exposure induces a delay in the reacquisition of function during head regeneration in Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1016/j.parint.2012.12.001openalex-snapshot
Ca2+ channels and praziquantel: A view from the free world
inferred← citeshttps://doi.org/10.1016/j.parint.2013.02.006openalex-snapshot
ABC multidrug transporters in schistosomes and other parasitic flatworms
inferred← citeshttps://doi.org/10.1016/j.pbb.2007.12.008openalex-snapshot
Reversal of cocaine-induced planarian behavior by parthenolide and related sesquiterpene lactones
inferred← citeshttps://doi.org/10.1016/j.pbb.2011.08.013openalex-snapshot
Minimal structural requirements of alkyl γ-lactones capable of antagonizing the cocaine-induced motility decrease in planarians
inferred← citeshttps://doi.org/10.1016/j.pt.2009.12.006openalex-snapshot
Schistosome genomes: a wealth of information
inferred← citeshttps://doi.org/10.1016/j.pt.2011.09.003openalex-snapshot
Schistosoma comparative genomics: integrating genome structure, parasite biology and anthelmintic discovery
inferred← citeshttps://doi.org/10.1016/j.semcdb.2018.04.014openalex-snapshot
Staying in shape: Planarians as a model for understanding regenerative morphology
inferred← citeshttps://doi.org/10.1016/j.smim.2014.06.005openalex-snapshot
Innate immune system and tissue regeneration in planarians: An area ripe for exploration
inferred← citeshttps://doi.org/10.1016/j.stem.2012.01.016openalex-snapshot
Genetic Regulators of a Pluripotent Adult Stem Cell System in Planarians Identified by RNAi and Clonal Analysis
inferred← citeshttps://doi.org/10.1016/j.tips.2012.05.002openalex-snapshot
Ivermectin binding sites in human and invertebrate Cys-loop receptors
inferred← citeshttps://doi.org/10.1016/j.ydbio.2009.12.013openalex-snapshot
hunchback and Ikaros-like zinc finger genes control reproductive system development in Caenorhabditis elegans
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.01.018openalex-snapshot
Germ layer specification and axial patterning in the embryonic development of the freshwater planarian Schmidtea polychroa
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.02.037openalex-snapshot
Different requirements for conserved post-transcriptional regulators in planarian regeneration and stem cell maintenance
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.03.010openalex-snapshot
Origin of Pax and Six gene families in sponges: Single PaxB and Six1/2 orthologs in Chalinula loosanoffi
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.08.007openalex-snapshot
Expression of secreted Wnt pathway components reveals unexpected complexity of the planarian amputation response
inferred← citeshttps://doi.org/10.1016/j.ydbio.2011.01.032openalex-snapshot
Evolutionary implications of morphogenesis and molecular patterning of the blind gut in the planarian Schmidtea polychroa
inferred← citeshttps://doi.org/10.1016/j.ydbio.2011.05.669openalex-snapshot
Stem cell-based growth, regeneration, and remodeling of the planarian intestine
inferred← citeshttps://doi.org/10.1016/j.ydbio.2012.03.010openalex-snapshot
TORC1 is required to balance cell proliferation and cell death in planarians
inferred← citeshttps://doi.org/10.1016/j.ydbio.2012.10.025openalex-snapshot
The Retinoblastoma pathway regulates stem cell proliferation in freshwater planarians
inferred← citeshttps://doi.org/10.1016/j.ydbio.2013.09.020openalex-snapshot
Planarian MBD2/3 is required for adult stem cell pluripotency independently of DNA methylation
inferred← citeshttps://doi.org/10.1016/j.ydbio.2014.09.024openalex-snapshot
A lophotrochozoan-specific nuclear hormone receptor is required for reproductive system development in the planarian
inferred← citeshttps://doi.org/10.1016/j.ydbio.2017.04.008openalex-snapshot
Genetic dissection of the planarian reproductive system through characterization of Schmidtea mediterranea CPEB homologs
inferred← citeshttps://doi.org/10.1016/j.ydbio.2017.07.022openalex-snapshot
Girardia dorotocephala transcriptome sequence, assembly, and validation through characterization of piwi homologs and stem cell progeny markers
inferred← citeshttps://doi.org/10.1016/j.ydbio.2017.07.023openalex-snapshot
The abrogation of condensin function provides independent evidence for defining the self-renewing population of pluripotent stem cells
inferred← citeshttps://doi.org/10.1016/j.ydbio.2021.02.004openalex-snapshot
CBP/p300 homologs CBP2 and CBP3 play distinct roles in planarian stem cell function
inferred← citeshttps://doi.org/10.1016/j.ygeno.2011.02.002openalex-snapshot
Transcriptome profiling and digital gene expression by deep-sequencing in normal/regenerative tissues of planarian Dugesia japonica
inferred← citeshttps://doi.org/10.1016/j.ygeno.2012.03.001openalex-snapshot
Identification of small non-coding RNAs in the planarian Dugesia japonica via deep sequencing
inferred← citeshttps://doi.org/10.1016/j.ygeno.2022.110293openalex-snapshot
Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data
inferred← citeshttps://doi.org/10.1016/j.ygeno.2025.111104openalex-snapshot
A modular pipeline for evidence-integrated genome annotation across species: A case study on Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1016/j.ympev.2019.05.010openalex-snapshot
Cryptic species delineation in freshwater planarians of the genus Dugesia (Platyhelminthes, Tricladida): Extreme intraindividual genetic diversity, morphological stasis, and karyological variability
inferred← citeshttps://doi.org/10.1016/s0091-679x(08)93004-1openalex-snapshot
Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1017/s0022149x24001020openalex-snapshot
Receptors for growth and development of Schistosoma mansoni
inferred← citeshttps://doi.org/10.1017/s0031182012000704openalex-snapshot
Platyhelminth Venom Allergen-Like (VAL) proteins: revealing structural diversity, class-specific features and biological associations across the phylum
inferred← citeshttps://doi.org/10.1017/s0031182014001449openalex-snapshot
What helminth genomes have taught us about parasite evolution
inferred← citeshttps://doi.org/10.1038/cdd.2008.65openalex-snapshot
Living with death: the evolution of the mitochondrial pathway of apoptosis in animals
inferred← citeshttps://doi.org/10.1038/cddis.2017.307openalex-snapshot
Conservation and divergence of mitochondrial apoptosis pathway in the Pacific oyster, Crassostrea gigas
inferred← citeshttps://doi.org/10.1038/celldisc.2016.29openalex-snapshot
Forkhead containing transcription factor Albino controls tetrapyrrole-based body pigmentation in planarian
inferred← citeshttps://doi.org/10.1038/cr.2011.151openalex-snapshot
Argonaute-2 regulates the proliferation of adult stem cells in planarian
inferred← citeshttps://doi.org/10.1038/emboj.2012.110openalex-snapshot
Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells
inferred← citeshttps://doi.org/10.1038/nature08140openalex-snapshot
The Schistosoma japonicum genome reveals features of host–parasite interplay
inferred← citeshttps://doi.org/10.1038/nature11696openalex-snapshot
Insights into bilaterian evolution from three spiralian genomes
inferred← citeshttps://doi.org/10.1038/ng.1065openalex-snapshot
Whole-genome sequence of Schistosoma haematobium
inferred← citeshttps://doi.org/10.1038/nprot.2014.041openalex-snapshot
Preparation of the planarian Schmidtea mediterranea for high-resolution histology and transmission electron microscopy
inferred← citeshttps://doi.org/10.1038/s41559-016-0019openalex-snapshot
Widespread maintenance of genome heterozygosity in Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1038/s41586-022-04757-3openalex-snapshot
Island-specific evolution of a sex-primed autosome in a sexual planarian
inferred← citeshttps://doi.org/10.1038/s41588-018-0262-1openalex-snapshot
Comparative genomics of the major parasitic worms
inferred← citeshttps://doi.org/10.1038/s41598-017-09567-6openalex-snapshot
Putrescine independent wound response phenotype is produced by ODC-like RNAi in planarians
inferred← citeshttps://doi.org/10.1038/srep06388openalex-snapshot
On-chip immobilization of planarians for in vivo imaging
inferred← citeshttps://doi.org/10.1038/srep45175openalex-snapshot
The identification of d-tryptophan as a bioactive substance for postembryonic ovarian development in the planarian Dugesia ryukyuensis
inferred← citeshttps://doi.org/10.1038/srep45616openalex-snapshot
Stem cell proliferation patterns as an alternative for in vivo prediction and discrimination of carcinogenic compounds
inferred← citeshttps://doi.org/10.1039/c4an02037eopenalex-snapshot
A quantitative metabolomics peek into planarian regeneration
inferred← citeshttps://doi.org/10.1073/pnas.0905222106openalex-snapshot
High-resolution profiling and discovery of planarian small RNAs
inferred← citeshttps://doi.org/10.1073/pnas.1516718112openalex-snapshot
Genome and transcriptome of the regeneration-competent flatworm, Macrostomum lignano
inferred← citeshttps://doi.org/10.1073/pnas.2021251118openalex-snapshot
Collagen IV differentially regulates planarian stem cell potency and lineage progression
inferred← citeshttps://doi.org/10.1074/mcp.m112.019026openalex-snapshot
Proteomic Profiling of the Planarian Schmidtea mediterranea and Its Mucous Reveals Similarities with Human Secretions and Those Predicted for Parasitic Flatworms
inferred← citeshttps://doi.org/10.1083/jcb.201207172openalex-snapshot
Heterochromatin protein 1 promotes self-renewal and triggers regenerative proliferation in adult stem cells
inferred← citeshttps://doi.org/10.1088/1478-3975/13/5/055001openalex-snapshot
Slo1 regulates ethanol-induced scrunching in freshwater planarians
inferred← citeshttps://doi.org/10.1088/1478-3975/8/2/026003openalex-snapshot
Memory and obesity affect the population dynamics of asexual freshwater planarians
inferred← citeshttps://doi.org/10.1089/cmb.2013.0025openalex-snapshot
ImagePlane: An Automated Image Analysis Pipeline for High-Throughput Screens Using the Planarian Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1089/scd.2011.0605openalex-snapshot
Inhibition of Planar Cell Polarity Extends Neural Growth During Regeneration, Homeostasis, and Development
inferred← citeshttps://doi.org/10.1091/mbc.e10-04-0373openalex-snapshot
An Outer Arm Dynein Conformational Switch Is Required for Metachronal Synchrony of Motile Cilia in Planaria
inferred← citeshttps://doi.org/10.1091/mbc.e16-01-0040openalex-snapshot
A prefoldin-associated WD-repeat protein (WDR92) is required for the correct architectural assembly of motile cilia
inferred← citeshttps://doi.org/10.1091/mbc.e18-10-0663openalex-snapshot
Tau tubulin kinase is required for spermatogenesis and development of motile cilia in planarian flatworms
inferred← citeshttps://doi.org/10.1093/bfgp/elad029openalex-snapshot
Spiralian genomics and the evolution of animal genome architecture
inferred← citeshttps://doi.org/10.1093/bfgp/els049openalex-snapshot
Linking micro- and macro-evolution at the cell type level: a view from the lophotrochozoan Platynereis dumerilii
inferred← citeshttps://doi.org/10.1093/gbe/evu078openalex-snapshot
Comparative Genomics of Flatworms (Platyhelminthes) Reveals Shared Genomic Features of Ecto- and Endoparastic Neodermata
inferred← citeshttps://doi.org/10.1093/gbe/evv126openalex-snapshot
A Novel Terminal-Repeat Retrotransposon in Miniature (TRIM) Is Massively Expressed inEchinococcus multilocularisStem Cells
inferred← citeshttps://doi.org/10.1093/gerona/gln059openalex-snapshot
Is There a Role for New Invertebrate Models for Aging Research?
inferred← citeshttps://doi.org/10.1093/infdis/jiu527openalex-snapshot
New Research Tools for Urogenital Schistosomiasis
inferred← citeshttps://doi.org/10.1093/jhered/est084openalex-snapshot
The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes
inferred← citeshttps://doi.org/10.1093/molbev/msq107openalex-snapshot
The Evolution of Thrombospondins and Their Ligand-Binding Activities
inferred← citeshttps://doi.org/10.1093/molbev/msq192openalex-snapshot
Evolution of the Insect Yellow Gene Family
inferred← citeshttps://doi.org/10.1093/nar/gkq426openalex-snapshot
SOBA: sequence ontology bioinformatics analysis
inferred← citeshttps://doi.org/10.1093/nar/gkv1148openalex-snapshot
PlanMine – a mineable resource of planarian biology and biodiversity
inferred← citeshttps://doi.org/10.1101/122135openalex-snapshot
Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells
inferred← citeshttps://doi.org/10.1101/2021.04.14.439782openalex-snapshot
Evolution of Nuclear Receptors in Platyhelminths
inferred← citeshttps://doi.org/10.1101/2021.05.24.445457openalex-snapshot
Island-specific evolution of a sex-primed autosome in the planarian Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1101/252007openalex-snapshot
A meta-analysis of Planarian: an animal model useful to understand the effect of magnetic field Planarian and magnetic field researches
inferred← citeshttps://doi.org/10.1101/746701openalex-snapshot
Ongoing repair of migration-coupled DNA damage allows stem cells to reach wound sites
inferred← citeshttps://doi.org/10.1101/gad.187377.112openalex-snapshot
A molecular wound response program associated with regeneration initiation in planarians
inferred← citeshttps://doi.org/10.1101/gr.113779.110openalex-snapshot
De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics
inferred← citeshttps://doi.org/10.1101/gr.239848.118openalex-snapshot
Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells
inferred← citeshttps://doi.org/10.1101/gr.6743907openalex-snapshot
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
inferred← citeshttps://doi.org/10.1101/pdb.emo101openalex-snapshot
Planarians: A Versatile and Powerful Model System for Molecular Studies of Regeneration, Adult Stem Cell Regulation, Aging, and Behavior
inferred← citeshttps://doi.org/10.1101/sqb.2008.73.022openalex-snapshot
Germ Cell Specification and Regeneration in Planarians
inferred← citeshttps://doi.org/10.1111/brv.12430openalex-snapshot
Polymorphic adaptations in metazoans to establish and maintain photosymbioses
inferred← citeshttps://doi.org/10.1111/dgd.12268openalex-snapshot
Heterogeneity of chromatoid bodies in adult pluripotent stem cells of planarian D ugesia japonica
inferred← citeshttps://doi.org/10.1111/j.1365-3024.2011.01349.xopenalex-snapshot
Recent advances in Schistosoma genomics
inferred← citeshttps://doi.org/10.1111/j.1440-169x.2009.01099.xopenalex-snapshot
Evolution and regeneration of the planarian central nervous system
inferred← citeshttps://doi.org/10.1111/jzs.12214openalex-snapshot
Diversification and biogeographic history of the Western Palearctic freshwater flatworm genusSchmidtea(Tricladida: Dugesiidae), with a redescription ofSchmidtea nova
inferred← citeshttps://doi.org/10.11144/javeriana.10554.3384openalex-snapshot
Anotación del transcriptoma foliar de la uchuva (Physalis peruviana L.) : fruta promisoria de la familia solanaceae
inferred← citeshttps://doi.org/10.1126/science.1222488openalex-snapshot
Cis - Acting Transcriptional Repression Establishes a Sharp Boundary in Chordate Embryos
inferred← citeshttps://doi.org/10.1126/science.aaq1723openalex-snapshot
Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics
inferred← citeshttps://doi.org/10.1128/iai.00653-09openalex-snapshot
Molecular Characterization of EmABP, an Apolipoprotein A-I Binding Protein Secreted by the Echinococcus multilocularis Metacestode
inferred← citeshttps://doi.org/10.1134/s000635092570085xopenalex-snapshot
A Study of the Structure and Function of Musculature in Planarians (Platyhelminthes)
inferred← citeshttps://doi.org/10.1134/s0026893317020078openalex-snapshot
Genomics and transcriptomics of the Chinese liver fluke Clonorchis sinensis (Opisthorchiidae, Trematoda)
inferred← citeshttps://doi.org/10.1134/s1062360415010075openalex-snapshot
Regeneration of planarians: Experimental object
inferred← citeshttps://doi.org/10.1134/s1990747813050097openalex-snapshot
Peptidergic signalization: An immunocytochemical study of FMRF-related peptides in the nervous system of planarians
inferred← citeshttps://doi.org/10.1155/2015/206161openalex-snapshot
Transfection of Platyhelminthes
inferred← citeshttps://doi.org/10.11646/zootaxa.2779.1.1openalex-snapshot
Freshwater planarians (Platyhelminthes, Tricladida) from the Iberian Peninsula and Greece: diversity and notes on ecology
inferred← citeshttps://doi.org/10.1186/1471-2105-10-67openalex-snapshot
Quantitative measures for the management and comparison of annotated genomes
inferred← citeshttps://doi.org/10.1186/1471-2105-12-491openalex-snapshot
MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects
inferred← citeshttps://doi.org/10.1186/1471-2164-10-464openalex-snapshot
Homology-based annotation of non-coding RNAs in the genomes of Schistosoma mansoni and Schistosoma japonicum
inferred← citeshttps://doi.org/10.1186/1471-2164-11-731openalex-snapshot
Smed454 dataset: unravelling the transcriptome of Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1186/1471-2164-12-133openalex-snapshot
A proteomics approach to decipher the molecular nature of planarian stem cells
inferred← citeshttps://doi.org/10.1186/1471-2164-12-596openalex-snapshot
The repertoire of G protein-coupled receptors in the human parasite Schistosoma mansoni and the model organism Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1186/1471-2164-13-289openalex-snapshot
Comparative transcriptome analysis between planarian Dugesia japonica and other platyhelminth species
inferred← citeshttps://doi.org/10.1186/1471-2164-14-906openalex-snapshot
The neuropeptide complement of the marine annelid Platynereis dumerilii
inferred← citeshttps://doi.org/10.1186/1742-9994-5-6openalex-snapshot
Comparative analysis of septic injury-inducible genes in phylogenetically distant model organisms of regeneration and stem cell research, the planarian Schmidtea mediterranea and the cnidarian Hydra vulgaris
inferred← citeshttps://doi.org/10.1186/1756-3305-4-203openalex-snapshot
Insights into the functional biology of schistosomes
inferred← citeshttps://doi.org/10.1186/gb-2009-10-6-r71openalex-snapshot
Genomic linkage map of the human blood fluke Schistosoma mansoni
inferred← citeshttps://doi.org/10.1186/gb-2012-13-3-r19openalex-snapshot
Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNA-seq, RNA interference and irradiation approach
inferred← citeshttps://doi.org/10.1186/s12862-017-0949-4openalex-snapshot
The protein subunit of telomerase displays patterns of dynamic evolution and conservation across different metazoan taxa
inferred← citeshttps://doi.org/10.1186/s12864-015-1979-1openalex-snapshot
A functional genomics screen identifies an Importin-α homolog as a regulator of stem cell function and tissue patterning during planarian regeneration
inferred← citeshttps://doi.org/10.1186/s12864-025-12513-wopenalex-snapshot
Curation of the Fasciola hepatica kinome as a resource for drug target discovery
inferred← citeshttps://doi.org/10.1186/s13062-026-00906-0openalex-snapshot
Mapping the knowledge landscape of planarian regeneration: a century of bibliometric insights
inferred← citeshttps://doi.org/10.1186/s13071-014-0622-3openalex-snapshot
Functional analysis of Girardia tigrina transcriptome seeds pipeline for anthelmintic target discovery
inferred← citeshttps://doi.org/10.1186/s13227-016-0044-8openalex-snapshot
HOX gene complement and expression in the planarian Schmidtea mediterranea
inferred← citeshttps://doi.org/10.1186/s13227-018-0110-5openalex-snapshot
Genome-wide transcriptome profiling and spatial expression analyses identify signals and switches of development in tapeworms
inferred← citeshttps://doi.org/10.1186/s40064-015-1278-yopenalex-snapshot
Transient transgenesis of the tapeworm Taenia crassiceps
inferred← citeshttps://doi.org/10.1186/s40851-018-0102-2openalex-snapshot
Draft genome of Dugesia japonica provides insights into conserved regulatory elements of the brain restriction gene nou-darake in planarians
inferred← citeshttps://doi.org/10.1242/bio.20123400openalex-snapshot
Towards a bioinformatics of patterning: a computational approach to understanding regulative morphogenesis
inferred← citeshttps://doi.org/10.1242/dev.044297openalex-snapshot
A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineages
inferred← citeshttps://doi.org/10.1242/dev.076182openalex-snapshot
PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells
inferred← citeshttps://doi.org/10.1242/dev.086900openalex-snapshot
Bioelectric signaling regulates head and organ size during planarian regeneration
inferred← citeshttps://doi.org/10.1242/dev.098590openalex-snapshot
Transcription factors lhx1/5-1 and pitx are required for the maintenance and regeneration of serotonergic neurons in planarians
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