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GATA-1 genome-wide occupancy associates with distinct epigenetic profiles in mouse fetal liver erythropoiesis

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/bies.201100137openalex-snapshot

Factor mediated gene priming in pluripotent stem cells sets the stage for lineage specification

inferredcites →https://doi.org/10.1002/iub.226openalex-snapshot

Erythropoiesis: Model systems, molecular regulators, and developmental programs

inferredcites →https://doi.org/10.1016/j.devcel.2008.04.002openalex-snapshot

Differential H3K4 Methylation Identifies Developmentally Poised Hematopoietic Genes

inferredcites →https://doi.org/10.1016/j.devcel.2011.04.008openalex-snapshot

Genome-wide Analysis of Simultaneous GATA1/2, RUNX1, FLI1, and SCL Binding in Megakaryocytes Identifies Hematopoietic Regulators

inferredcites →https://doi.org/10.1016/j.exphem.2005.06.014openalex-snapshot

A hanging drop culture method to study terminal erythroid differentiation

inferredcites →https://doi.org/10.1016/j.gde.2012.06.002openalex-snapshot

Combinatorial control of cell fate and reprogramming in the mammalian germline

inferredcites →https://doi.org/10.1016/j.molcel.2009.11.001openalex-snapshot

Discovering Hematopoietic Mechanisms through Genome-wide Analysis of GATA Factor Chromatin Occupancy

inferredcites →https://doi.org/10.1016/j.molcel.2009.11.002openalex-snapshot

Insights into GATA-1-Mediated Gene Activation versus Repression via Genome-wide Chromatin Occupancy Analysis

inferredcites →https://doi.org/10.1016/j.molcel.2011.12.021openalex-snapshot

Intragenic Enhancers Act as Alternative Promoters

inferredcites →https://doi.org/10.1016/j.molcel.2012.05.051openalex-snapshot

Cofactor-Mediated Restriction of GATA-1 Chromatin Occupancy Coordinates Lineage-Specific Gene Expression

inferredcites →https://doi.org/10.1016/j.semcdb.2004.11.002openalex-snapshot

GATA1 in normal and malignant hematopoiesis

inferredcites →https://doi.org/10.1016/j.tig.2011.01.001openalex-snapshot

Genome-wide transcription factor binding: beyond direct target regulation

inferredcites →https://doi.org/10.1016/s1074-7613(03)00242-5openalex-snapshot

GATA-1 Converts Lymphoid and Myelomonocytic Progenitors into the Megakaryocyte/Erythrocyte Lineages

inferredcites →https://doi.org/10.1023/a:1010933404324openalex-snapshot

Random Forests

inferredcites →https://doi.org/10.1038/emboj.2010.318openalex-snapshot

Distinct roles of GCN5/PCAF‐mediated H3K9ac and CBP/p300‐mediated H3K18/27ac in nuclear receptor transactivation

inferredcites →https://doi.org/10.1038/nmeth.1246openalex-snapshot

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

inferredcites →https://doi.org/10.1038/nprot.2008.211openalex-snapshot

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

inferredcites →https://doi.org/10.1038/nprot.2012.101openalex-snapshot

Identifying ChIP-seq enrichment using MACS

inferredcites →https://doi.org/10.1038/nrg3306openalex-snapshot

ChIP–seq and beyond: new and improved methodologies to detect and characterize protein–DNA interactions

inferredcites →https://doi.org/10.1038/sj.emboj.7600702openalex-snapshot

GATA‐1 forms distinct activating and repressive complexes in erythroid cells

inferredcites →https://doi.org/10.1038/sj.onc.1204494openalex-snapshot

Leukemic transformation of normal murine erythroid progenitors: v- and c-ErbB act through signaling pathways activated by the EpoR and c-Kit in stress erythropoiesis

inferredcites →https://doi.org/10.1038/sj.onc.1205326openalex-snapshot

Transcriptional regulation of erythropoiesis: an affair involving multiple partners

inferredcites →https://doi.org/10.1038/sj.onc.1206902openalex-snapshot

Altered interaction of HDAC5 with GATA-1 during MEL cell differentiation

inferredcites →https://doi.org/10.1038/sj.onc.1210763openalex-snapshot

Erythroid and megakaryocytic transformation

inferredcites →https://doi.org/10.1046/j.1365-2141.2000.02037.xopenalex-snapshot

The monoclonal antibody TER‐119 recognizes a molecule associated with glycophorin A and specifically marks the late stages of murine erythroid lineage

inferredcites →https://doi.org/10.1073/pnas.1121019109openalex-snapshot

A core erythroid transcriptional network is repressed by a master regulator of myelo-lymphoid differentiation

inferredcites →https://doi.org/10.1073/pnas.95.5.2061openalex-snapshot

CREB-binding protein cooperates with transcription factor GATA-1 and is required for erythroid differentiation

inferredcites →https://doi.org/10.1074/jbc.m406038200openalex-snapshot

Dynamic GATA Factor Interplay at a Multicomponent Regulatory Region of the GATA-2 Locus

inferredcites →https://doi.org/10.1074/jbc.r110.159079openalex-snapshot

GATA Switches as Developmental Drivers

inferredcites →https://doi.org/10.1080/01635581.2011.539312openalex-snapshot

Differential Expression of Thrombospondin (THBS1) in Tumorigenic and Nontumorigenic Prostate Epithelial Cells in Response to a Chromatin-Binding Soy Peptide

inferredcites →https://doi.org/10.1084/jem.20102260openalex-snapshot

Networking erythropoiesis

inferredcites →https://doi.org/10.1093/database/bar041openalex-snapshot

BioMart Central Portal: an open database network for the biological community

inferredcites →https://doi.org/10.1093/emboj/cdf368openalex-snapshot

Transcription factor‐mediated lineage switching reveals plasticity in primary committed progenitor cells

inferredcites →https://doi.org/10.1093/nar/gks1193openalex-snapshot

NCBI GEO: archive for functional genomics data sets—update

inferredcites →https://doi.org/10.1101/gad.551810openalex-snapshot

The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation

inferredcites →https://doi.org/10.1101/gr.098921.109openalex-snapshot

Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression

inferredcites →https://doi.org/10.1101/gr.104935.110openalex-snapshot

Genome-wide identification of TAL1's functional targets: Insights into its mechanisms of action in primary erythroid cells

inferredcites →https://doi.org/10.1101/gr.106575.110openalex-snapshot

A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells

inferredcites →https://doi.org/10.1101/gr.109389.110openalex-snapshot

A unique H3K4me2 profile marks tissue-specific gene regulation

inferredcites →https://doi.org/10.1101/gr.125088.111openalex-snapshot

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

inferredcites →https://doi.org/10.1126/science.1207306openalex-snapshot

Global DNA Demethylation During Mouse Erythropoiesis in Vivo

inferredcites →https://doi.org/10.1128/mcb.02076-07openalex-snapshot

DOT1L/KMT4 Recruitment and H3K79 Methylation Are Ubiquitously Coupled with Gene Transcription in Mammalian Cells

inferredcites →https://doi.org/10.1128/mcb.23.4.1334-1340.2003openalex-snapshot

Formation of a Tissue-Specific Histone Acetylation Pattern by the Hematopoietic Transcription Factor GATA-1

inferredcites →https://doi.org/10.1128/mcb.25.23.10235-10250.2005openalex-snapshot

ETO-2 Associates with SCL in Erythroid Cells and Megakaryocytes and Provides Repressor Functions in Erythropoiesis

inferredcites →https://doi.org/10.1128/mcb.25.4.1215-1227.2005openalex-snapshot

GATA1 Function, a Paradigm for Transcription Factors in Hematopoiesis

inferredcites →https://doi.org/10.1182/blood-2004-04-1333openalex-snapshot

Differences in the chromatin structure and cis-element organization of the human and mouse GATA1 loci: implications for cis-element identification

inferredcites →https://doi.org/10.1182/blood-2004-04-1603openalex-snapshot

Global regulation of erythroid gene expression by transcription factor GATA-1

inferredcites →https://doi.org/10.1182/blood-2011-03-341404openalex-snapshot

Gene induction and repression during terminal erythropoiesis are mediated by distinct epigenetic changes

inferredcites →https://doi.org/10.1182/blood-2011-05-355107openalex-snapshot

Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppel-like factor during erythrocyte differentiation

inferredcites →https://doi.org/10.1182/blood-2011-07-356006openalex-snapshot

From stem cell to red cell: regulation of erythropoiesis at multiple levels by multiple proteins, RNAs, and chromatin modifications

inferredcites →https://doi.org/10.1182/blood-2011-09-380634openalex-snapshot

Chromatin occupancy analysis reveals genome-wide GATA factor switching during hematopoiesis

inferredcites →https://doi.org/10.1182/blood.v98.12.3261openalex-snapshot

Ineffective erythropoiesis in Stat5a−/−5b−/− mice due to decreased survival of early erythroblasts

inferredcites →https://doi.org/10.1182/blood.v99.9.3089openalex-snapshot

Differentiation plasticity of hematopoietic cells

inferredcites →https://doi.org/10.2302/kjm.60.47openalex-snapshot

Role of Transcription Factors in Differentiation and Reprogramming of Hematopoietic Cells

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4648584openalex-extracted

inferred← citeshttps://doi.org/10.1002/iub.2169openalex-snapshot

GATA factor transcriptional activity: Insights from genome‐wide binding profiles

inferred← citeshttps://doi.org/10.1002/iub.2192openalex-snapshot

Regulation of GATA1 levels in erythropoiesis

inferred← citeshttps://doi.org/10.1016/b978-0-12-799958-6.00011-1openalex-snapshot

Regulation of erythroid cell differentiation by transcription factors, chromatin structure alterations, and noncoding RNA

inferred← citeshttps://doi.org/10.1016/j.bbagrm.2014.05.018openalex-snapshot

GATA4 represses an ileal program of gene expression in the proximal small intestine by inhibiting the acetylation of histone H3, lysine 27

inferred← citeshttps://doi.org/10.1016/j.bbagrm.2016.09.007openalex-snapshot

Distinct and overlapping DNMT1 interactions with multiple transcription factors in erythroid cells: Evidence for co-repressor functions

inferred← citeshttps://doi.org/10.1016/j.celrep.2022.111830openalex-snapshot

EKLF/Klf1 regulates erythroid transcription by its pioneering activity and selective control of RNA Pol II pause-release

inferred← citeshttps://doi.org/10.1016/j.cels.2024.10.006openalex-snapshot

Systematic analysis identifies a connection between spatial and genomic variations of chromatin states

inferred← citeshttps://doi.org/10.1016/j.tig.2013.10.001openalex-snapshot

Ldb1 complexes: the new master regulators of erythroid gene transcription

inferred← citeshttps://doi.org/10.1038/ng.2871openalex-snapshot

Analysis of hundreds of cis-regulatory landscapes at high resolution in a single, high-throughput experiment

inferred← citeshttps://doi.org/10.1038/s41467-025-56535-0openalex-snapshot

INSTINCT: Multi-sample integration of spatial chromatin accessibility sequencing data via stochastic domain translation

inferred← citeshttps://doi.org/10.1038/s41598-018-29109-yopenalex-snapshot

In utero gene expression in the Slc39a8(neo/neo) knockdown mouse

inferred← citeshttps://doi.org/10.1038/s41598-025-94222-8openalex-snapshot

In vivo deletion of a GWAS-identified Myb distal enhancer acts on Myb expression, globin switching, and clinical erythroid parameters in β-thalassemia

inferred← citeshttps://doi.org/10.1080/07853890.2025.2490824openalex-snapshot

Histone modifications in the regulation of erythropoiesis

inferred← citeshttps://doi.org/10.1080/15384101.2015.1090067openalex-snapshot

Repression by RB1 characterizes genes involved in the penultimate stage of erythroid development

inferred← citeshttps://doi.org/10.1080/17474086.2018.1436965openalex-snapshot

GATA1 insufficiencies in primary myelofibrosis and other hematopoietic disorders: consequences for therapy

inferred← citeshttps://doi.org/10.1093/bioinformatics/btae466openalex-snapshot

Single-cell and spatial multiomic inference of gene regulatory networks using SCRIPro

inferred← citeshttps://doi.org/10.1101/2023.12.11.570452openalex-snapshot

Broad H3K4me3 Domain Is Associated with Spatial Coherence during Mammalian Embryonic Development

inferred← citeshttps://doi.org/10.1128/mcb.01370-14openalex-snapshot

TAF10 Interacts with the GATA1 Transcription Factor and Controls Mouse Erythropoiesis

inferred← citeshttps://doi.org/10.1172/jci165831openalex-snapshot

Long noncoding RNA HIKER regulates erythropoiesis in Monge’s disease via CSNK2B

inferred← citeshttps://doi.org/10.1182/blood.2019001234openalex-snapshot

Chromatin occupancy and epigenetic analysis reveal new insights into the function of the GATA1 N terminus in erythropoiesis

inferred← citeshttps://doi.org/10.1186/s12859-015-0787-6openalex-snapshot

Peak shape clustering reveals biological insights

inferred← citeshttps://doi.org/10.1242/jcs.220558openalex-snapshot

Meeting report – INDEPTH kick-off meeting

inferred← citeshttps://doi.org/10.1371/journal.pone.0140077openalex-snapshot

GATA1 and PU.1 Bind to Ribosomal Protein Genes in Erythroid Cells: Implications for Ribosomopathies

inferred← citeshttps://doi.org/10.1371/journal.pone.0152234openalex-snapshot

GATA-1 Inhibits PU.1 Gene via DNA and Histone H3K9 Methylation of Its Distal Enhancer in Erythroleukemia

inferred← citeshttps://doi.org/10.3389/fmed.2024.1448654openalex-snapshot

High altitude polycythemia and its maladaptive mechanisms: an updated review

inferred← citeshttps://doi.org/10.3390/ijms20184603openalex-snapshot

Mouse Tryptase Gene Expression is Coordinately Regulated by GATA1 and GATA2 in Bone Marrow-Derived Mast Cells

inferred← citeshttps://doi.org/10.3390/ijms23116149openalex-snapshot

Erythroid Cell Research: 3D Chromatin, Transcription Factors and Beyond

inferred← citeshttps://doi.org/10.3390/ijms26136342openalex-snapshot

Epigenetic Regulation of Erythropoiesis: From Developmental Programs to Therapeutic Targets

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