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Regulation of DNA replication at the end of the mitochondrial D-loop involves the helicase TWINKLE and a conserved sequence element

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/j.1460-2075.1985.tb03817.xopenalex-snapshot

Replication priming and transcription initiate from precisely the same site in mouse mitochondrial DNA.

inferredcites →https://doi.org/10.1002/j.1460-2075.1996.tb00676.xopenalex-snapshot

RNA‐DNA hybrid formation at the human mitochondrial heavy‐strand origin ceases at replication start sites: an implication for RNA‐DNA hybrids serving as primers.

inferredcites →https://doi.org/10.1002/jcp.1041210218openalex-snapshot

Effects of 2′,3′‐dideoxynucleosides on mammalian cells and viruses

inferredcites →https://doi.org/10.1006/meth.1996.0090openalex-snapshot

Characterization of Chemokine Function in Animal Models of Diseases

inferredcites →https://doi.org/10.1007/bf00312616openalex-snapshot

The complete and symmetric transcription of the main non coding region of rat mitochondrial genome: in vivo mapping of heavy and light transcripts

inferredcites →https://doi.org/10.1016/0022-2836(74)90355-6openalex-snapshot

Mechanism of mitochondrial DNA replication in mouse L-cells: Asynchronous replication of strands, segregation of circular daughter molecules, aspects of topology and turnover of an initiation sequence

inferredcites →https://doi.org/10.1016/0022-2836(78)90269-3openalex-snapshot

Mechanism of mitochondrial DNA replication in mouse L-cells: Kinetics of synthesis and turnover of the initiation sequence

inferredcites →https://doi.org/10.1016/0022-2836(79)90440-6openalex-snapshot

Mechanism of mitochondrial DNA replication in mouse L-cells: Localization and sequence of the light-strand origin of replication

inferredcites →https://doi.org/10.1016/0022-2836(81)90087-5openalex-snapshot

Identification of common molecular subsequences

inferredcites →https://doi.org/10.1016/0022-2836(86)90272-xopenalex-snapshot

Structural conservation and variation in the D-loop-containing region of vertebrate mitochondrial DNA

inferredcites →https://doi.org/10.1016/0092-8674(84)90343-xopenalex-snapshot

Precise identification of individual promoters for transcription of each strand of human mitochondrial DNA

inferredcites →https://doi.org/10.1016/0092-8674(85)90291-0openalex-snapshot

In vitro replication of human mitochondrial DNA: Accurate initiation at the origin of light-strand synthesis

inferredcites →https://doi.org/10.1016/0147-619x(81)90041-xopenalex-snapshot

Mechanism of mitochondrial DNA replication in mouse L cells: Localization of alkali-sensitive sites at the two origins of replication

inferredcites →https://doi.org/10.1016/0888-7543(91)90071-lopenalex-snapshot

Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms

inferredcites →https://doi.org/10.1016/j.bbabio.2010.04.015openalex-snapshot

The human mitochondrial replication fork in health and disease

inferredcites →https://doi.org/10.1016/j.cell.2011.06.051openalex-snapshot

The Human Mitochondrial Transcriptome

inferredcites →https://doi.org/10.1016/j.cmet.2013.03.006openalex-snapshot

MTERF1 Binds mtDNA to Prevent Transcriptional Interference at the Light-Strand Promoter but Is Dispensable for rRNA Gene Transcription Regulation

inferredcites →https://doi.org/10.1016/j.exger.2014.03.027openalex-snapshot

In D-loop: 40years of mitochondrial 7S DNA

inferredcites →https://doi.org/10.1016/j.mito.2013.08.003openalex-snapshot

Exonuclease of human DNA polymerase gamma disengages its strand displacement function

inferredcites →https://doi.org/10.1016/j.molcel.2009.12.021openalex-snapshot

Mitochondrial RNA Polymerase Is Needed for Activation of the Origin of Light-Strand DNA Replication

inferredcites →https://doi.org/10.1016/s0014-5793(01)02345-6openalex-snapshot

Inhibition of mitochondrial protein synthesis promotes autonomous regulation of mtDNA expression and generation of a new mitochondrial RNA species

inferredcites →https://doi.org/10.1016/s0021-9258(19)69373-7openalex-snapshot

Mechanism of replication of human mitochondrial DNA. Localization of the 5' ends of nascent daughter strands.

inferredcites →https://doi.org/10.1016/s0021-9258(19)75738-xopenalex-snapshot

Cellular metabolism of 2',3'-dideoxycytidine, a compound active against human immunodeficiency virus in vitro.

inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot

Basic Local Alignment Search Tool

inferredcites →https://doi.org/10.1016/s0022-3913(78)80178-4openalex-snapshot

The significance of age changes in human alveolar mucosa and bone

inferredcites →https://doi.org/10.1016/s0076-6879(96)64017-8openalex-snapshot

[15]Isolation and assay of mitochondrial transcription termination factor from human cells

inferredcites →https://doi.org/10.1016/s0092-8674(00)80688-1openalex-snapshot

Coupled Leading- and Lagging-Strand Synthesis of Mammalian Mitochondrial DNA

inferredcites →https://doi.org/10.1016/s0378-1119(97)00404-6openalex-snapshot

Mammalian mitochondrial D-loop region structural analysis: identification of new conserved sequences and their functional and evolutionary implications

inferredcites →https://doi.org/10.1038/13779openalex-snapshot

Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA

inferredcites →https://doi.org/10.1038/277192a0openalex-snapshot

Nucleotide sequence of a region of human mitochondrial DNA containing the precisely identified origin of replication

inferredcites →https://doi.org/10.1038/290457a0openalex-snapshot

Sequence and organization of the human mitochondrial genome

inferredcites →https://doi.org/10.1038/290465a0openalex-snapshot

Distinctive features of the 5′-terminal sequences of the human mitochondrial mRNAs

inferredcites →https://doi.org/10.1038/290470a0openalex-snapshot

tRNA punctuation model of RNA processing in human mitochondria

inferredcites →https://doi.org/10.1038/embor.2012.161openalex-snapshot

In vivo mutagenesis reveals that OriL is essential for mitochondrial DNA replication

inferredcites →https://doi.org/10.1038/nature02517openalex-snapshot

Premature ageing in mice expressing defective mitochondrial DNA polymerase

inferredcites →https://doi.org/10.1038/ncomms8303openalex-snapshot

The exonuclease activity of DNA polymerase γ is required for ligation during mitochondrial DNA replication

inferredcites →https://doi.org/10.1038/ng909openalex-snapshot

Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA

inferredcites →https://doi.org/10.1038/sj.emboj.7601392openalex-snapshot

Replication of vertebrate mitochondrial DNA entails transient ribonucleotide incorporation throughout the lagging strand

inferredcites →https://doi.org/10.1073/pnas.1006026107openalex-snapshot

G-quadruplex structures in RNA stimulate mitochondrial transcription termination and primer formation

inferredcites →https://doi.org/10.1073/pnas.78.10.6116openalex-snapshot

Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences.

inferredcites →https://doi.org/10.1073/pnas.79.23.7195openalex-snapshot

Identification of initiation sites for heavy-strand and light-strand transcription in human mitochondrial DNA.

inferredcites →https://doi.org/10.1073/pnas.82.2.351openalex-snapshot

Priming of human mitochondrial DNA replication occurs at the light-strand promoter.

inferredcites →https://doi.org/10.1073/pnas.85.8.2444openalex-snapshot

Improved tools for biological sequence comparison.

inferredcites →https://doi.org/10.1074/jbc.272.24.15275openalex-snapshot

In Vivo Determination of Replication Origins of Human Mitochondrial DNA by Ligation-mediated Polymerase Chain Reaction

inferredcites →https://doi.org/10.1074/jbc.m308028200openalex-snapshot

Mammalian Mitochondrial DNA Replicates Bidirectionally from an Initiation Zone

inferredcites →https://doi.org/10.1074/jbc.m602429200openalex-snapshot

Conserved Sequence Box II Directs Transcription Termination and Primer Formation in Mitochondria

inferredcites →https://doi.org/10.1093/bioinformatics/btm404openalex-snapshot

Clustal W and Clustal X version 2.0

inferredcites →https://doi.org/10.1093/hmg/ddu336openalex-snapshot

Linear mtDNA fragments and unusual mtDNA rearrangements associated with pathological deficiency of MGME1 exonuclease

inferredcites →https://doi.org/10.1093/humrep/15.1.11openalex-snapshot

Urinary oestrogen patterns in long follicular phases

inferredcites →https://doi.org/10.1093/humrep/15.suppl_2.11openalex-snapshot

Transcription and replication of mitochondrial DNA

inferredcites →https://doi.org/10.1093/molbev/msn225openalex-snapshot

Evidence for Variable Selective Pressures at a Large Secondary Structure of the Human Mitochondrial DNA Control Region

inferredcites →https://doi.org/10.1093/nar/30.9.2004openalex-snapshot

Release of replication termination controls mitochondrial DNA copy number after depletion with 2',3'-dideoxycytidine

inferredcites →https://doi.org/10.1093/nar/gki693openalex-snapshot

Contrahelicase activity of the mitochondrial transcription termination factor mtDBP

inferredcites →https://doi.org/10.1093/nar/gkl1116openalex-snapshot

The accessory subunit B of DNA polymerase is required for mitochondrial replisome function

inferredcites →https://doi.org/10.1093/nar/gkp335openalex-snapshot

MEME SUITE: tools for motif discovery and searching

inferredcites →https://doi.org/10.1093/nar/gkq527openalex-snapshot

Maintenance of respiratory chain function in mouse hearts with severely impaired mtDNA transcription

inferredcites →https://doi.org/10.1093/nar/gkr367openalex-snapshot

HMMER web server: interactive sequence similarity searching

inferredcites →https://doi.org/10.1093/nar/gks802openalex-snapshot

A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop

inferredcites →https://doi.org/10.1101/gad.229328.113openalex-snapshot

Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression

inferredcites →https://doi.org/10.1128/mcb.13.4.2162openalex-snapshot

Protein Binding to a Single Termination-Associated Sequence in the Mitochondrial DNA D-Loop Region

inferredcites →https://doi.org/10.1128/mcb.15.1.580openalex-snapshot

A Persistent RNA-DNA Hybrid Is Formed during Transcription at a Phylogenetically Conserved Mitochondrial DNA Sequence

inferredcites →https://doi.org/10.1128/mcb.4.8.1605openalex-snapshot

Highly Efficient RNA-Synthesizing System That Uses Isolated Human Mitochondria: New Initiation Events and In Vivo-Like Processing Patterns

inferredcites →https://doi.org/10.1146/annurev.biochem.76.060305.152028openalex-snapshot

DNA Replication and Transcription in Mammalian Mitochondria

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Mechanism of transcription initiation and primer generation at the mitochondrial replication origin OriL

inferred← citeshttps://doi.org/10.1590/1678-4685-gmb-2019-0069openalex-snapshot

Roles of the mitochondrial replisome in mitochondrial DNA deletion formation

inferred← citeshttps://doi.org/10.20944/preprints202204.0245.v1openalex-snapshot

ClpP-Deletion Causes Azoospermia, with Meiosis-I Delay and Insufficient Biosynthesis of Spermatid Factors, Due to Mitochondrial Dysfunction with Accumulation of Perrault Proteins ERAL1, PEO1, and HARS2

inferred← citeshttps://doi.org/10.20944/preprints202205.0033.v1openalex-snapshot

Clpp-Deletion Causes Azoospermia, with Meiosis-I Delay and Insufficient Biosynthesis of Spermatid Factors, Due to Mitochondrial Dysfunction with Accumulation of Perrault Proteins ERAL1, PEO1, and HARS2

inferred← citeshttps://doi.org/10.21203/rs.3.rs-10361921/v1openalex-snapshot

DRP lyase deficient DNA polymerase beta impairs mitochondrial electron transport chain and compromise mitochondrial DNA integrity

inferred← citeshttps://doi.org/10.21203/rs.3.rs-11188068/v1openalex-snapshot

Extremely Divergent Repeats Made the Largest Bilaterian Mitogenome in Photosymbiotic Bivalves

inferred← citeshttps://doi.org/10.2147/cia.s123278openalex-snapshot

Association of genetic variations in the mitochondrial DNA control region with presbycusis

inferred← citeshttps://doi.org/10.3109/19401736.2015.1118068openalex-snapshot

Strictly conserved tri-nucleotide motif “CAT” is associated with TAS DNA protein-binding sites in human mitochondrial DNA control region

inferred← citeshttps://doi.org/10.3389/fcell.2020.00004openalex-snapshot

Mitoepigenetics and Its Emerging Roles in Cancer

inferred← citeshttps://doi.org/10.3389/fimmu.2025.1571576openalex-snapshot

Targeting oxidative stress in diabetic retinopathy: mechanisms, pathology, and novel treatment approaches

inferred← citeshttps://doi.org/10.3389/finsc.2022.987718openalex-snapshot

Polymorphisms in the hypervariable control region of the mitochondrial DNA differentiate BPH populations

inferred← citeshttps://doi.org/10.3389/fmolb.2017.00074openalex-snapshot

Off-Target Effects of Drugs that Disrupt Human Mitochondrial DNA Maintenance

inferred← citeshttps://doi.org/10.3389/fopht.2023.1309836openalex-snapshot

Mitochondrial DNA D-loop variants correlate with a primary open-angle glaucoma subgroup

inferred← citeshttps://doi.org/10.3390/ani13020186openalex-snapshot

Comparison and Phylogenetic Analysis of Mitochondrial Genomes of Talpidae Animals

inferred← citeshttps://doi.org/10.3390/biom14040411openalex-snapshot

Mitochondrial and Nuclear DNA Variants in Amyotrophic Lateral Sclerosis: Enrichment in the Mitochondrial Control Region and Sirtuin Pathway Genes in Spinal Cord Tissue

inferred← citeshttps://doi.org/10.3390/cells12010052openalex-snapshot

CLPP Depletion Causes Diplotene Arrest; Underlying Testis Mitochondrial Dysfunction Occurs with Accumulation of Perrault Proteins ERAL1, PEO1, and HARS2

inferred← citeshttps://doi.org/10.3390/genes13081470openalex-snapshot

Evolution of the Noncoding Features of Sea Snake Mitochondrial Genomes within Elapidae

inferred← citeshttps://doi.org/10.3390/genes15050617openalex-snapshot

Mitochondrial DNA: Inherent Complexities Relevant to Genetic Analyses

inferred← citeshttps://doi.org/10.3390/genes17101203openalex-snapshot

Complete Mitochondrial Genome of a French Bulldog with Carcinoma planoepitheliale keratodes G1: A Descriptive Case Report

inferred← citeshttps://doi.org/10.3390/ijms25031502openalex-snapshot

Human mtDNA-Encoded Long ncRNAs: Knotty Molecules and Complex Functions

inferred← citeshttps://doi.org/10.3390/ijms26178317openalex-snapshot

The Complete Mitochondrial Genome of the Deep-Dwelling Goby Suruga fundicola (Teleostei, Gobiidae) Reveals Evidence of Recombination in the Control Region

inferred← citeshttps://doi.org/10.3390/life11070663openalex-snapshot

Mitochondrial Genomic Landscape: A Portrait of the Mitochondrial Genome 40 Years after the First Complete Sequence

inferred← citeshttps://doi.org/10.3390/medsci13030087openalex-snapshot

Pathophysiological Mechanisms of Diabetes-Induced Macrovascular and Microvascular Complications: The Role of Oxidative Stress

inferred← citeshttps://doi.org/10.3390/pharmaceutics13060810openalex-snapshot

Engineering Genetic Systems for Treating Mitochondrial Diseases

inferred← citeshttps://doi.org/10.37247/pagen2ed.2.2021.9openalex-snapshot

Sequencing of Mitochondrial DNA with Long Repetitive Regions and Detection of the Frog Lineages of Large mt Genome Showing Reduction of Purifying Selection

inferred← citeshttps://doi.org/10.4103/nrr.nrr-d-25-00495openalex-snapshot

Mitochondrial DNA homeostasis: A novel therapeutic target for neurodegenerative diseases

inferred← citeshttps://doi.org/10.6084/m9.figshare.24586012openalex-snapshot

Additional file 1 of Mitogenome sequences of domestic cats demonstrate lineage expansions and dynamic mutation processes in a mitochondrial minisatellite

inferred← citeshttps://doi.org/10.6084/m9.figshare.24586114openalex-snapshot

Additional file 2 of Mitogenome sequences of domestic cats demonstrate lineage expansions and dynamic mutation processes in a mitochondrial minisatellite

inferred← citeshttps://doi.org/10.6084/m9.figshare.26641585openalex-snapshot

Additional file 3 of Mitogenome sequences of domestic cats demonstrate lineage expansions and dynamic mutation processes in a mitochondrial minisatellite

inferred← citeshttps://doi.org/10.70675/292f625az9431z45aaz8426z08c82f3bffa3openalex-snapshot

RNA import into mitochondria of human cells : large-scale identification and therapeutic applications

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