On the public citation graph
Posterior Predictive Bayesian Phylogenetic Model Selection
0 signed · 106 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/0471650129.dob0522openalex-snapshot
PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]
inferredcites →https://doi.org/10.1002/j.1538-7305.1948.tb00917.xopenalex-snapshot
A Mathematical Theory of Communication
inferredcites →https://doi.org/10.1002/j.1538-7305.1948.tb01338.xopenalex-snapshot
A Mathematical Theory of Communication
inferredcites →https://doi.org/10.1007/0-387-27733-1_16openalex-snapshot
Posterior Mapping and Posterior Predictive Distributions
inferredcites →https://doi.org/10.1007/978-1-4612-1276-8openalex-snapshot
Monte Carlo Methods in Bayesian Computation
inferredcites →https://doi.org/10.1007/bf01731581openalex-snapshot
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
inferredcites →https://doi.org/10.1016/b978-1-4832-3210-2.50006-6openalex-snapshot
Mammalian Protein Metabolism
inferredcites →https://doi.org/10.1016/b978-1-4832-3211-9.50009-7openalex-snapshot
Evolution of Protein Molecules
inferredcites →https://doi.org/10.1038/nature01743openalex-snapshot
Widespread horizontal transfer of mitochondrial genes in flowering plants
inferredcites →https://doi.org/10.1080/10635150490445779openalex-snapshot
Modeling Compositional Heterogeneity
inferredcites →https://doi.org/10.1080/10635150500433722openalex-snapshot
Computing Bayes Factors Using Thermodynamic Integration
inferredcites →https://doi.org/10.1080/10635150600899780openalex-snapshot
Statistical Methods in Molecular Evolution
inferredcites →https://doi.org/10.1089/cmb.2010.0139openalex-snapshot
Improved Harmonic Mean Estimator for Phylogenetic Model Evidence
inferredcites →https://doi.org/10.1093/bioinformatics/13.3.235openalex-snapshot
Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
inferredcites →https://doi.org/10.1093/bioinformatics/14.9.817openalex-snapshot
MODELTEST: testing the model of DNA substitution.
inferredcites →https://doi.org/10.1093/bioinformatics/btn651openalex-snapshot
PuMA: Bayesian analysis of partitioned (and unpartitioned) model adequacy
inferredcites →https://doi.org/10.1093/bioinformatics/btp368openalex-snapshot
PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating
inferredcites →https://doi.org/10.1093/biomet/85.1.1openalex-snapshot
Model choice: a minimum posterior predictive loss approach
inferredcites →https://doi.org/10.1093/biomet/91.1.45openalex-snapshot
Bayesian criterion based model assessment for categorical data
inferredcites →https://doi.org/10.1093/molbev/msh123openalex-snapshot
Bayesian Phylogenetic Model Selection Using Reversible Jump Markov Chain Monte Carlo
inferredcites →https://doi.org/10.1093/molbev/msm193openalex-snapshot
A General Comparison of Relaxed Molecular Clock Models
inferredcites →https://doi.org/10.1093/molbev/msn083openalex-snapshot
jModelTest: Phylogenetic Model Averaging
inferredcites →https://doi.org/10.1093/molbev/msq168openalex-snapshot
Assessment of Substitution Model Adequacy Using Frequentist and Bayesian Methods
inferredcites →https://doi.org/10.1093/molbev/msq224openalex-snapshot
Choosing among Partition Models in Bayesian Phylogenetics
inferredcites →https://doi.org/10.1093/molbev/msr210openalex-snapshot
Tail Paradox, Partial Identifiability, and Influential Priors in Bayesian Branch Length Inference
inferredcites →https://doi.org/10.1093/molbev/mss084openalex-snapshot
Improving the Accuracy of Demographic and Molecular Clock Model Comparison While Accommodating Phylogenetic Uncertainty
inferredcites →https://doi.org/10.1093/oso/9780198522669.003.0009openalex-snapshot
Model Determination using Predictive Distributions with Implementation via Sampling-Based Methods
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003872openalex-snapshot
Bayesian Selection of Continuous-Time Markov Chain Evolutionary Models
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004175openalex-snapshot
Bayesian Model Adequacy and Choice in Phylogenetics
inferredcites →https://doi.org/10.1093/sysbio/syp080openalex-snapshot
Cryptic Failure of Partitioned Bayesian Phylogenetic Analyses: Lost in the Land of Long Trees
inferredcites →https://doi.org/10.1093/sysbio/syp081openalex-snapshot
When Trees Grow Too Long: Investigating the Causes of Highly Inaccurate Bayesian Branch-Length Estimates
inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
inferredcites →https://doi.org/10.1093/sysbio/syq085openalex-snapshot
Improving Marginal Likelihood Estimation for Bayesian Phylogenetic Model Selection
inferredcites →https://doi.org/10.1093/sysbio/syr064openalex-snapshot
A Method for Inferring the Rate of Evolution of Homologous Characters that Can Potentially Improve Phylogenetic Inference, Resolve Deep Divergence and Correct Systematic Biases
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1109/tac.1974.1100705openalex-snapshot
A new look at the statistical model identification
inferredcites →https://doi.org/10.1111/j.1467-9868.2007.00650.xopenalex-snapshot
Marginal Likelihood Estimation via Power Posteriors
inferredcites →https://doi.org/10.1111/j.2517-6161.1994.tb01956.xopenalex-snapshot
Approximate Bayesian Inference with the Weighted Likelihood Bootstrap
inferredcites →https://doi.org/10.1111/jpy.12003openalex-snapshot
Probing the Monophyly of the Sphaeropleales (Chlorophyceae) Using Data From Five Genes
inferredcites →https://doi.org/10.1126/science.1065889openalex-snapshot
Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology
inferredcites →https://doi.org/10.1146/annurev.ecolsys.36.102003.152633openalex-snapshot
Model Selection in Phylogenetics
inferredcites →https://doi.org/10.1214/aoms/1177732360openalex-snapshot
The Large-Sample Distribution of the Likelihood Ratio for Testing Composite Hypotheses
inferredcites →https://doi.org/10.1214/aos/1176344136openalex-snapshot
Estimating the Dimension of a Model
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.12688/openreseurope.16679.1zenodo-depositor-declared
Practical guidelines for Bayesian phylogenetic inference using Markov Chain Monte Carlo (MCMC)
inferred← citeshttps://doi.org/10.12688/openreseurope.16679.2zenodo-depositor-declared
Practical guidelines for Bayesian phylogenetic inference using Markov Chain Monte Carlo (MCMC)
inferred← citeshttps://doi.org/10.12688/openreseurope.16679.3zenodo-depositor-declared
Practical guidelines for Bayesian phylogenetic inference using Markov chain Monte Carlo (MCMC)
inferred← citeshttps://doi.org/10.1002/jia2.25946openalex-snapshot
Methodological issues in the designing and reporting of frequentist and Bayesian meta‐analysis to assess COVID‐19 outcomes among PLHIV with various comorbidities
inferred← citeshttps://doi.org/10.1002/jia2.25947openalex-snapshot
Response to “Methodological issues in the designing and reporting of frequentist and Bayesian meta‐analysis to assess COVID‐19 outcomes among PLHIV with various comorbidities” by Ram Bajpai, Vivek Verma and Gyan Prakash Singh
inferred← citeshttps://doi.org/10.1007/978-3-031-97281-2_19openalex-snapshot
Incorporating Heavy-Tailed Spatial Random Effects in the Analysis of Areal Disease Data
inferred← citeshttps://doi.org/10.1016/j.ympev.2016.01.022openalex-snapshot
Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution
inferred← citeshttps://doi.org/10.1017/s0269964818000190openalex-snapshot
VARIABLE SELECTION FOR BAYESIAN SURVIVAL MODELS USING BREGMAN DIVERGENCE MEASURE
inferred← citeshttps://doi.org/10.1038/s41467-021-22073-8openalex-snapshot
Harnessing machine learning to guide phylogenetic-tree search algorithms
inferred← citeshttps://doi.org/10.1038/srep20528openalex-snapshot
Chloroplast Phylogenomic Inference of Green Algae Relationships
inferred← citeshttps://doi.org/10.1080/02664763.2025.2499884openalex-snapshot
Approaches to modelling spatial data using skewed distributions with an application to disease mapping
inferred← citeshttps://doi.org/10.1080/03610918.2021.1878371openalex-snapshot
Analysis of masked data with Lindley failure model
inferred← citeshttps://doi.org/10.1080/03610926.2026.2712988openalex-snapshot
Modeling multivariate lattice data with Dirichlet process mixture spatial random effects
inferred← citeshttps://doi.org/10.1080/14783363.2019.1696672openalex-snapshot
Modelling of ISO 9001 certifications for the American countries: a Bayesian approach
inferred← citeshttps://doi.org/10.1080/14783363.2021.1944083openalex-snapshot
Bayesian modelling of number of ISO 9001 issued in Brazilian territory: a regional and state level analysis
inferred← citeshttps://doi.org/10.1080/29979676.2025.2566646openalex-snapshot
Covariate Adjusted Functional Mixed Membership Models
inferred← citeshttps://doi.org/10.1086/682022openalex-snapshot
Model Adequacy and the Macroevolution of Angiosperm Functional Traits
inferred← citeshttps://doi.org/10.1093/evolinnean/kzag001openalex-snapshot
Modelling compositional and exchange rate changes over time
inferred← citeshttps://doi.org/10.1093/gbe/evae199openalex-snapshot
Modeling Substitution Rate Evolution across Lineages and Relaxing the Molecular Clock
inferred← citeshttps://doi.org/10.1093/gbe/evy094openalex-snapshot
Differences in Performance among Test Statistics for Assessing Phylogenomic Model Adequacy
inferred← citeshttps://doi.org/10.1093/gbe/evz167openalex-snapshot
A Novel Test for Absolute Fit of Evolutionary Models Provides a Means to Correctly Identify the Substitution Model and the Model Tree
inferred← citeshttps://doi.org/10.1093/molbev/msv154openalex-snapshot
Evaluating the Adequacy of Molecular Clock Models Using Posterior Predictive Simulations
inferred← citeshttps://doi.org/10.1093/molbev/msy127openalex-snapshot
Relative Evolutionary Rates in Proteins Are Largely Insensitive to the Substitution Model
inferred← citeshttps://doi.org/10.1093/sysbio/syaa008openalex-snapshot
The Multispecies Coalescent Model Outperforms Concatenation Across Diverse Phylogenomic Data Sets
inferred← citeshttps://doi.org/10.1093/sysbio/syac046openalex-snapshot
Assessment of Absolute Substitution Model Fit Accommodating Time-Reversible and Non-Time-Reversible Evolutionary Processes
inferred← citeshttps://doi.org/10.1093/sysbio/syad004openalex-snapshot
Identifying the Best Approximating Model in Bayesian Phylogenetics: Bayes Factors, Cross-Validation or wAIC?
inferred← citeshttps://doi.org/10.1093/sysbio/syt066openalex-snapshot
Robust Regression and Posterior Predictive Simulation Increase Power to Detect Early Bursts of Trait Evolution
inferred← citeshttps://doi.org/10.1093/sysbio/syu009openalex-snapshot
Predictive Approaches to Assessing the Fit of Evolutionary Models
inferred← citeshttps://doi.org/10.1093/sysbio/syu132openalex-snapshot
Phycas: Software for Bayesian Phylogenetic Analysis
inferred← citeshttps://doi.org/10.1093/sysbio/syv116openalex-snapshot
Characterizing and Comparing Phylogenies from their Laplacian Spectrum
inferred← citeshttps://doi.org/10.1093/sysbio/syw060openalex-snapshot
Bayesian Total-Evidence Dating Reveals the Recent Crown Radiation of Penguins
inferred← citeshttps://doi.org/10.1093/sysbio/syx073openalex-snapshot
Impact of Model Violations on the Inference of Species Boundaries Under the Multispecies Coalescent
inferred← citeshttps://doi.org/10.1093/sysbio/syy048openalex-snapshot
Phylodynamic Model Adequacy Using Posterior Predictive Simulations
inferred← citeshttps://doi.org/10.1093/sysbio/syy066openalex-snapshot
How Well Does Your Phylogenetic Model Fit Your Data?
inferred← citeshttps://doi.org/10.1093/sysbio/syz003openalex-snapshot
Marginal Likelihoods in Phylogenetics: A Review of Methods and Applications
inferred← citeshttps://doi.org/10.1093/sysbio/syz046openalex-snapshot
19 Dubious Ways to Compute the Marginal Likelihood of a Phylogenetic Tree Topology
inferred← citeshttps://doi.org/10.1101/2020.12.21.423829openalex-snapshot
BoskR – Testing Adequacy of Diversification Models Using Tree Shape
inferred← citeshttps://doi.org/10.1101/2021.08.04.455051openalex-snapshot
Relative model selection of evolutionary substitution models can be sensitive to multiple sequence alignment uncertainty
inferred← citeshttps://doi.org/10.1101/2023.03.06.531416openalex-snapshot
adequaSSE: Model Adequacy Testing for Trait-Dependent Diversification Models
inferred← citeshttps://doi.org/10.1101/860809openalex-snapshot
The Multispecies Coalescent Model Outperforms Concatenation across Diverse Phylogenomic Data Sets
inferred← citeshttps://doi.org/10.1111/1755-0998.12435openalex-snapshot
Posterior predictive checks of coalescent models: P2C2M, an R package
inferred← citeshttps://doi.org/10.1111/1755-0998.14087openalex-snapshot
Bayesian StairwayPlot for Inferring Single Population Demographic Histories From Site Frequency Spectra
inferred← citeshttps://doi.org/10.1111/2041-210x.13541openalex-snapshot
P2C2M.GMYC: An R package for assessing the utility of the Generalized Mixed Yule Coalescent model
inferred← citeshttps://doi.org/10.1111/evo.12916openalex-snapshot
Community trees: Identifying codiversification in the Páramo dipteran community
inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-110617-062249openalex-snapshot
Evaluating Model Performance in Evolutionary Biology
inferred← citeshttps://doi.org/10.11606/t.45.2017.tde-11052017-163847openalex-snapshot
Análise Bayesiana de modelos de mistura finita com dados censurados
inferred← citeshttps://doi.org/10.1163/1937240x-00002371openalex-snapshot
The forest for the trees: evaluating molecular phylogenies with an emphasis on higher-level Decapoda
inferred← citeshttps://doi.org/10.1186/s12862-021-01931-5openalex-snapshot
Relative model selection of evolutionary substitution models can be sensitive to multiple sequence alignment uncertainty
inferred← citeshttps://doi.org/10.1186/s12874-024-02348-6openalex-snapshot
Bayesian spatial-temporal analysis and determinants of cardiovascular diseases in Tanzania mainland
inferred← citeshttps://doi.org/10.1214/22-sts853openalex-snapshot
Statistical Challenges in Tracking the Evolution of SARS-CoV-2
inferred← citeshttps://doi.org/10.12688/openreseurope.16679.4openalex-snapshot
Practical guidelines for Bayesian phylogenetic inference using Markov chain Monte Carlo (MCMC)
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1006650openalex-snapshot
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
inferred← citeshttps://doi.org/10.1371/journal.pone.0269438openalex-snapshot
Assessing model adequacy for Bayesian Skyline plots using posterior predictive simulation
inferred← citeshttps://doi.org/10.1371/journal.pone.0279597openalex-snapshot
Roadmap to the study of gene and protein phylogeny and evolution—A practical guide
inferred← citeshttps://doi.org/10.18227/1982-8470ragro.v12i4.5166openalex-snapshot
Bayesian Modelling of the effects of nitrogen doses on the morphological characteristics of braquiaria grass
inferred← citeshttps://doi.org/10.2139/ssrn.7119309openalex-snapshot
Rural Dengue Dynamics: The Interplay of Climate, Built Environment, and Agriculture in Costa Rica
inferred← citeshttps://doi.org/10.25148/etd.fidc006826openalex-snapshot
Evolutionary and Population Dynamics of Crustaceans in the Gulf of Mexico
inferred← citeshttps://doi.org/10.29086/10413/22656openalex-snapshot
Flexible Bayesian hierarchical spatial modelling in disease mapping.
inferred← citeshttps://doi.org/10.47749/t/unicamp.2016.971246openalex-snapshot
Modelos mistos para respostas positivas aumentadas em zero
inferred← citeshttps://doi.org/10.5705/ss.202021.0247openalex-snapshot
Identifying Latent Groups in Spatial Panel Data Using a Markov Random Field Constrained Product Partition Model
inferred← citeshttps://doi.org/10.6084/m9.figshare.17097990openalex-snapshot
Additional file 1 of Relative model selection of evolutionary substitution models can be sensitive to multiple sequence alignment uncertainty
inferred← citeshttps://doi.org/10.70675/d3180991zb31fz4017z9085zfac23159b0aeopenalex-snapshot
Génomique des populations appliquée : détection de signatures de sélection au sein de populations expérimentales
inferred← citeshttps://doi.org/10.7717/peerj.8271openalex-snapshot
Identifying model violations under the multispecies coalescent model using P2C2M.SNAPP
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.