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Gradual divergence and diversification of mammalian duplicate gene functions

https://doi.org/10.1101/004267
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-3-642-86659-3openalex-snapshot
Evolution by Gene Duplication
inferredcites →https://doi.org/10.1007/pl00006540openalex-snapshot
On the Possibility of Constructive Neutral Evolution
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1038/35057039openalex-snapshot
Evolutionary analyses of the human genome
inferredcites →https://doi.org/10.1038/nature06936openalex-snapshot
Genome analysis of the platypus reveals unique signatures of evolution
inferredcites →https://doi.org/10.1038/nature10532openalex-snapshot
The evolution of gene expression levels in mammalian organs
inferredcites →https://doi.org/10.1073/pnas.1313759110openalex-snapshot
Neofunctionalization of young duplicate genes in Drosophila
inferredcites →https://doi.org/10.1086/318206openalex-snapshot
Genomic Divergences between Humans and Other Hominoids and the Effective Population Size of the Common Ancestor of Humans and Chimpanzees
inferredcites →https://doi.org/10.1089/cmb.2009.0074openalex-snapshot
Duplication Mechanism and Disruptions in Flanking Regions Determine the Fate of Mammalian Gene Duplicates
inferredcites →https://doi.org/10.1093/bioinformatics/bti042openalex-snapshot
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
inferredcites →https://doi.org/10.1093/gbe/evr063openalex-snapshot
Characterizing the Influence of Effective Population Size on the Rate of Adaptation: Gillespie’s Darwin Domain
inferredcites →https://doi.org/10.1093/genetics/151.4.1531openalex-snapshot
Preservation of Duplicate Genes by Complementary, Degenerative Mutations
inferredcites →https://doi.org/10.1093/genetics/159.4.1789openalex-snapshot
The Probability of Preservation of a Newly Arisen Gene Duplicate
inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot
PAML 4: Phylogenetic Analysis by Maximum Likelihood
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040034openalex-snapshot
Relationships in the Drosophila obscura species group, inferred from mitochondrial cytochrome oxidase II sequences.
inferredcites →https://doi.org/10.1101/gr.101386.109openalex-snapshot
Origins, evolution, and phenotypic impact of new genes
inferredcites →https://doi.org/10.1101/gr.3059305openalex-snapshot
Comparative genome sequencing of Drosophila pseudoobscura : Chromosomal, gene, and cis -element evolution
inferredcites →https://doi.org/10.1126/science.1089370openalex-snapshot
The Origins of Genome Complexity
inferredcites →https://doi.org/10.1126/science.3082006openalex-snapshot
Rates of DNA Sequence Evolution Differ Between Taxonomic Groups
inferredcites →https://doi.org/10.1186/gb-2006-7-2-r13openalex-snapshot
Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana
inferredcites →https://doi.org/10.1266/jjg.62.139openalex-snapshot
Higher rates of nucleotide substitution in Drosophila than in mammals.
inferredcites →https://doi.org/10.1371/journal.pbio.0030245openalex-snapshot
Evolution at Two Levels: On Genes and Form
inferredcites →https://doi.org/10.1371/journal.pgen.1003176openalex-snapshot
The Roles of Whole-Genome and Small-Scale Duplications in the Functional Specialization of Saccharomyces cerevisiae Genes
inferredcites →https://doi.org/10.1371/journal.pone.0022594openalex-snapshot
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
inferredcites →https://doi.org/10.1534/genetics.104.034249openalex-snapshot
Elevated Polymorphism and Divergence in the Class C Scavenger Receptors of Drosophila melanogaster and D. simulansSequence data from this article have been deposited with the EMBL/GenBank Data Libraries under accession nos. AY865019, AY865135.
inferredcites →https://doi.org/10.1534/genetics.104.037051openalex-snapshot
Rapid Subfunctionalization Accompanied by Prolonged and Substantial Neofunctionalization in Duplicate Gene Evolution
inferredcites →https://doi.org/10.2307/1530208openalex-snapshot
Evolution by Gene Duplication
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
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