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Fast and accurate long-range phasing in a UK Biobank cohort

https://doi.org/10.1101/028282
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/gepi.20533openalex-snapshot
MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes
inferredcites →https://doi.org/10.1002/gepi.20635openalex-snapshot
Identity‐by‐descent‐based phasing and imputation in founder populations using graphical models
inferredcites →https://doi.org/10.1016/j.ajhg.2009.01.005openalex-snapshot
A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals
inferredcites →https://doi.org/10.1016/j.ajhg.2011.01.010openalex-snapshot
A Fast, Powerful Method for Detecting Identity by Descent
inferredcites →https://doi.org/10.1016/j.ajhg.2012.06.013openalex-snapshot
Phasing of Many Thousands of Genotyped Samples
inferredcites →https://doi.org/10.1016/j.ajhg.2012.10.010openalex-snapshot
Improved Heritability Estimation from Genome-wide SNPs
inferredcites →https://doi.org/10.1016/j.ajhg.2013.09.002openalex-snapshot
Haplotype Estimation Using Sequencing Reads
inferredcites →https://doi.org/10.1016/j.ajhg.2015.07.012openalex-snapshot
Accurate Non-parametric Estimation of Recent Effective Population Size from Segments of Identity by Descent
inferredcites →https://doi.org/10.1016/j.ajhg.2015.11.020openalex-snapshot
Genotype Imputation with Millions of Reference Samples
inferredcites →https://doi.org/10.1016/j.ygeno.2011.04.005openalex-snapshot
Next generation genome-wide association tool: Design and coverage of a high-throughput European-optimized SNP array
inferredcites →https://doi.org/10.1038/nature08186openalex-snapshot
Common variants conferring risk of schizophrenia
inferredcites →https://doi.org/10.1038/nature08625openalex-snapshot
Parental origin of sequence variants associated with complex diseases
inferredcites →https://doi.org/10.1038/nature09525openalex-snapshot
Fine-scale recombination rate differences between sexes, populations and individuals
inferredcites →https://doi.org/10.1038/nature14230openalex-snapshot
The fine-scale genetic structure of the British population
inferredcites →https://doi.org/10.1038/nature14659openalex-snapshot
Sparse whole-genome sequencing identifies two loci for major depressive disorder
inferredcites →https://doi.org/10.1038/ng.1046openalex-snapshot
Discovery of common variants associated with low TSH levels and thyroid cancer risk
inferredcites →https://doi.org/10.1038/ng.216openalex-snapshot
Detection of sharing by descent, long-range phasing and haplotype imputation
inferredcites →https://doi.org/10.1038/ng.2283openalex-snapshot
Extremely low-coverage sequencing and imputation increases power for genome-wide association studies
inferredcites →https://doi.org/10.1038/ng.2354openalex-snapshot
Fast and accurate genotype imputation in genome-wide association studies through pre-phasing
inferredcites →https://doi.org/10.1038/ng.2437openalex-snapshot
A study based on whole-genome sequencing yields a rare variant at 8q24 associated with prostate cancer
inferredcites →https://doi.org/10.1038/ng.2740openalex-snapshot
A rare nonsynonymous sequence variant in C3 is associated with high risk of age-related macular degeneration
inferredcites →https://doi.org/10.1038/ng.2833openalex-snapshot
Common and low-frequency variants associated with genome-wide recombination rate
inferredcites →https://doi.org/10.1038/ng.2882openalex-snapshot
Identification of low-frequency and rare sequence variants associated with elevated or reduced risk of type 2 diabetes
inferredcites →https://doi.org/10.1038/ng.3211openalex-snapshot
LD Score regression distinguishes confounding from polygenicity in genome-wide association studies
inferredcites →https://doi.org/10.1038/ng.3246openalex-snapshot
Loss-of-function variants in ABCA7 confer risk of Alzheimer's disease
inferredcites →https://doi.org/10.1038/ng.3247openalex-snapshot
Large-scale whole-genome sequencing of the Icelandic population
inferredcites →https://doi.org/10.1038/ng.3342openalex-snapshot
Loss-of-function variants in ATM confer risk of gastric cancer
inferredcites →https://doi.org/10.1038/ng.661openalex-snapshot
Common variants near CAV1 and CAV2 are associated with primary open-angle glaucoma
inferredcites →https://doi.org/10.1038/ng.781openalex-snapshot
A rare variant in MYH6 is associated with high risk of sick sinus syndrome
inferredcites →https://doi.org/10.1038/ng.955openalex-snapshot
Mutations in BRIP1 confer high risk of ovarian cancer
inferredcites →https://doi.org/10.1038/ng2088openalex-snapshot
A new multipoint method for genome-wide association studies by imputation of genotypes
inferredcites →https://doi.org/10.1038/nmeth.1785openalex-snapshot
A linear complexity phasing method for thousands of genomes
inferredcites →https://doi.org/10.1038/nmeth.2307openalex-snapshot
Improved whole-chromosome phasing for disease and population genetic studies
inferredcites →https://doi.org/10.1038/nrg2796openalex-snapshot
Genotype imputation for genome-wide association studies
inferredcites →https://doi.org/10.1038/nrg3054openalex-snapshot
Haplotype phasing: existing methods and new developments
inferredcites →https://doi.org/10.1086/428594openalex-snapshot
Accounting for Decay of Linkage Disequilibrium in Haplotype Inference and Missing-Data Imputation
inferredcites →https://doi.org/10.1086/502802openalex-snapshot
A Fast and Flexible Statistical Model for Large-Scale Population Genotype Data: Applications to Inferring Missing Genotypes and Haplotypic Phase
inferredcites →https://doi.org/10.1086/521987openalex-snapshot
Rapid and Accurate Haplotype Phasing and Missing-Data Inference for Whole-Genome Association Studies By Use of Localized Haplotype Clustering
inferredcites →https://doi.org/10.1093/bioinformatics/btt144openalex-snapshot
Improved ancestry inference using weights from external reference panels
inferredcites →https://doi.org/10.1093/bioinformatics/btu014openalex-snapshot
Efficient haplotype matching and storage using the positional Burrows–Wheeler transform (PBWT)
inferredcites →https://doi.org/10.1093/bioinformatics/btu704openalex-snapshot
minimac2: faster genotype imputation
inferredcites →https://doi.org/10.1093/genetics/165.4.2213openalex-snapshot
Modeling Linkage Disequilibrium and Identifying Recombination Hotspots Using Single-Nucleotide Polymorphism Data
inferredcites →https://doi.org/10.1101/018143openalex-snapshot
Fast principal components analysis reveals convergent evolution of ADH1B gene in Europe and East Asia
inferredcites →https://doi.org/10.1101/022418openalex-snapshot
Haplotypes of common SNPs can explain missing heritability of complex diseases
inferredcites →https://doi.org/10.1101/gr.081398.108openalex-snapshot
Whole population, genome-wide mapping of hidden relatedness
inferredcites →https://doi.org/10.1101/gr.117259.110openalex-snapshot
Low-coverage sequencing: Implications for design of complex trait association studies
inferredcites →https://doi.org/10.1101/gr.173641.114openalex-snapshot
Parente2: a fast and accurate method for detecting identity by descent
inferredcites →https://doi.org/10.1145/276698.276876openalex-snapshot
Approximate nearest neighbors
inferredcites →https://doi.org/10.1159/000288706openalex-snapshot
Quantification of Population Structure Using Correlated SNPs by Shrinkage Principal Components
inferredcites →https://doi.org/10.1186/2047-217x-4-1openalex-snapshot
SmileFinder: a resampling-based approach to evaluate signatures of selection from genome-wide sets of matching allele frequency data in two or more diploid populations
inferredcites →https://doi.org/10.1186/s13742-015-0047-8openalex-snapshot
Second-generation PLINK: rising to the challenge of larger and richer datasets
inferredcites →https://doi.org/10.1371/journal.pgen.1000529openalex-snapshot
A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies
inferredcites →https://doi.org/10.1371/journal.pgen.1004234openalex-snapshot
A General Approach for Haplotype Phasing across the Full Spectrum of Relatedness
inferredcites →https://doi.org/10.1371/journal.pmed.1001779openalex-snapshot
UK Biobank: An Open Access Resource for Identifying the Causes of a Wide Range of Complex Diseases of Middle and Old Age
inferredcites →https://doi.org/10.1371/journal.pone.0034267openalex-snapshot
Cryptic Distant Relatives Are Common in Both Isolated and Cosmopolitan Genetic Samples
inferredcites →https://doi.org/10.1371/journal.pone.0092713openalex-snapshot
An Effective Filter for IBD Detection in Large Data Sets
inferredcites →https://doi.org/10.1534/genetics.113.150029openalex-snapshot
Improving the Accuracy and Efficiency of Identity-by-Descent Detection in Population Data
inferredcites →https://doi.org/10.1534/genetics.115.178616openalex-snapshot
Characterizing Race/Ethnicity and Genetic Ancestry for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort
inferredcites →https://doi.org/10.1534/genetics.115.178905openalex-snapshot
Genotyping Informatics and Quality Control for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort
inferredcites →https://doi.org/10.4086/toc.2012.v008a014openalex-snapshot

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/ana.26150openalex-snapshot
Genome‐Wide Association Study Identifies Risk Loci for Cluster Headache
inferred← citeshttps://doi.org/10.1002/elps.202200237openalex-snapshot
Testing of two SNP array–based genealogy algorithms using extended Han Chinese pedigrees and recommendations for improved performances in forensic practice
inferred← citeshttps://doi.org/10.1002/gepi.22093openalex-snapshot
Using imputed genotype data in the joint score tests for genetic association and gene–environment interactions in case‐control studies
inferred← citeshttps://doi.org/10.1007/s13258-020-00982-0openalex-snapshot
GEN2VCF: a converter for human genome imputation output format to VCF format
inferred← citeshttps://doi.org/10.1016/b978-0-12-812626-4.00010-3openalex-snapshot
A Look to the Future
inferred← citeshttps://doi.org/10.1016/j.ajhg.2016.09.014openalex-snapshot
Population Structure of UK Biobank and Ancient Eurasians Reveals Adaptation at Genes Influencing Blood Pressure
inferred← citeshttps://doi.org/10.1038/ng.3583openalex-snapshot
Haplotype estimation for biobank-scale data sets
inferred← citeshttps://doi.org/10.1038/ng.3679openalex-snapshot
Reference-based phasing using the Haplotype Reference Consortium panel
inferred← citeshttps://doi.org/10.1038/s41397-022-00270-yopenalex-snapshot
Implementation of CYP2D6 copy-number imputation panel and frequency of key pharmacogenetic variants in Finnish individuals with a psychotic disorder
inferred← citeshttps://doi.org/10.1038/s41431-020-0699-4openalex-snapshot
Differences in local population history at the finest level: the case of the Estonian population
inferred← citeshttps://doi.org/10.1038/s41467-025-60446-5openalex-snapshot
High-resolution detection of copy number alterations in single cells with HiScanner
inferred← citeshttps://doi.org/10.1038/s41588-018-0177-xopenalex-snapshot
High-throughput inference of pairwise coalescence times identifies signals of selection and enriched disease heritability
inferred← citeshttps://doi.org/10.1038/s41588-023-01584-8openalex-snapshot
Multi-ancestry genome-wide association meta-analysis of Parkinson’s disease
inferred← citeshttps://doi.org/10.1038/s41598-022-26496-1openalex-snapshot
Analysis of merged transcriptomic and genomic datasets to identify genes and pathways underlying residual feed intake in growing pigs
inferred← citeshttps://doi.org/10.1111/dom.16123openalex-snapshot
Type 2 diabetes genetic risk and incident diabetes across diabetes risk enhancers
inferred← citeshttps://doi.org/10.1371/journal.pbio.2002458openalex-snapshot
Identifying genetic variants that affect viability in large cohorts
inferred← citeshttps://doi.org/10.1371/journal.pgen.1007275openalex-snapshot
Identification and functional analysis of glycemic trait loci in the China Health and Nutrition Survey
inferred← citeshttps://doi.org/10.1534/genetics.117.1122openalex-snapshot
Benchmarking Relatedness Inference Methods with Genome-Wide Data from Thousands of Relatives
inferred← citeshttps://doi.org/10.18297/etd/3530openalex-snapshot
Characterization of adiposity and inflammation genetic pleiotropy underlying cardiovascular risk factors in Hispanics.
inferred← citeshttps://doi.org/10.21203/rs.3.rs-673011/v1openalex-snapshot
Impact of natural selection on global patterns of genetic variation, and association with clinical phenotypes, at genes involved in SARS-CoV-2 infection.
inferred← citeshttps://doi.org/10.53846/goediss-7709openalex-snapshot
Methods and software to enhance statistical analysis in large scale problems in breeding and quantitative genetics
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