On the public citation graph
MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s40484-013-0006-2openalex-snapshot
Computational methodology for ChIP‐seq analysis
inferredcites →https://doi.org/10.1016/j.csda.2008.09.029openalex-snapshot
GAP: A graphical environment for matrix visualization and cluster analysis
inferredcites →https://doi.org/10.1016/s0076-6879(06)11009-5openalex-snapshot
[9] TM4 Microarray Software Suite
inferredcites →https://doi.org/10.1021/ci0496954openalex-snapshot
Molecular Property eXplorer: A Novel Approach to Visualizing SAR Using Tree-Maps and Heatmaps
inferredcites →https://doi.org/10.1093/bioinformatics/bth349openalex-snapshot
Java Treeview—extensible visualization of microarray data
inferredcites →https://doi.org/10.1093/bioinformatics/bti141openalex-snapshot
PermutMatrix: a graphical environment to arrange gene expression profiles in optimal linear order
inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot
edgeR : a Bioconductor package for differential expression analysis of digital gene expression data
inferredcites →https://doi.org/10.1093/nar/gkw419openalex-snapshot
Heatmapper: web-enabled heat mapping for all
inferredcites →https://doi.org/10.1101/gr.141424.112openalex-snapshot
RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development
inferredcites →https://doi.org/10.1109/mcg.2014.1openalex-snapshot
Characterizing Cancer Subtypes Using Dual Analysis in Caleydo StratomeX
inferredcites →https://doi.org/10.1186/1471-2105-14-91openalex-snapshot
A comparison of methods for differential expression analysis of RNA-seq data
inferredcites →https://doi.org/10.1186/1471-2105-7-337openalex-snapshot
HeatMapper: powerful combined visualization of gene expression profile correlations, genotypes, phenotypes and sample characteristics
inferredcites →https://doi.org/10.1186/gb-2008-9-7-r118openalex-snapshot
MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis
inferredcites →https://doi.org/10.1186/gb-2010-11-2-r14openalex-snapshot
Gene ontology analysis for RNA-seq: accounting for selection bias
inferredcites →https://doi.org/10.1186/s13029-014-0030-2openalex-snapshot
HeatmapGenerator: high performance RNAseq and microarray visualization software suite to examine differential gene expression levels using an R and C++ hybrid computational pipeline
inferredcites →https://doi.org/10.1186/s13059-015-0866-zopenalex-snapshot
Ancient DNA and the rewriting of human history: be sparing with Occam’s razor
inferredcites →https://doi.org/10.1186/s13321-014-0044-4openalex-snapshot
InCHlib – interactive cluster heatmap for web applications
inferredcites →https://doi.org/10.12688/f1000research.7035.1openalex-snapshot
RNA-Seq workflow: gene-level exploratory analysis and differential expression
inferredcites →https://doi.org/10.12688/f1000research.7035.2openalex-snapshot
RNA-Seq workflow: gene-level exploratory analysis and differential expression
inferredcites →https://doi.org/10.1371/journal.pcbi.1003326openalex-snapshot
Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data
inferredcites →https://doi.org/10.1371/journal.pone.0019541openalex-snapshot
Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps
inferredcites →https://doi.org/10.2144/03342mt01openalex-snapshot
TM4: A Free, Open-Source System for Microarray Data Management and Analysis
inferredcites →https://doi.org/10.32614/cran.package.dplyropenalex-snapshot
dplyr: A Grammar of Data Manipulation
inferredcites →https://doi.org/10.32614/cran.package.htmlwidgetsopenalex-snapshot
htmlwidgets: HTML Widgets for R
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1101/076463openalex-snapshot
shinyheatmap: ultra fast low memory heatmap web interface for big data genomics
inferred← citeshttps://doi.org/10.1371/journal.pone.0176334openalex-snapshot
shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics
inferred← citeshttps://doi.org/10.1371/journal.pone.0261083openalex-snapshot
FaDA: A web application for regular laboratory data analyses
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