On the public citation graph
Searching more genomic sequence with less memory for fast and accurate metagenomic profiling
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1016/j.copbio.2011.12.017openalex-snapshot
From genomics to metagenomics
inferredcites →https://doi.org/10.1016/j.mimet.2013.08.011openalex-snapshot
High throughput sequencing methods and analysis for microbiome research
inferredcites →https://doi.org/10.1016/j.mimet.2013.10.006openalex-snapshot
Genomics and metagenomics in medical microbiology
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1038/nmeth.2066openalex-snapshot
Metagenomic microbial community profiling using unique clade-specific marker genes
inferredcites →https://doi.org/10.1093/bioinformatics/btt389openalex-snapshot
Scalable metagenomic taxonomy classification using a reference genome database
inferredcites →https://doi.org/10.1093/nar/gkv180openalex-snapshot
Accurate read-based metagenome characterization using a hierarchical suite of unique signatures
inferredcites →https://doi.org/10.1101/001727openalex-snapshot
SIANN: Strain Identification by Alignment to Near Neighbors
inferredcites →https://doi.org/10.1101/gr.171934.113openalex-snapshot
A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples
inferredcites →https://doi.org/10.1101/gr.184879.114openalex-snapshot
Using populations of human and microbial genomes for organism detection in metagenomes
inferredcites →https://doi.org/10.1109/clustr.2009.5289187openalex-snapshot
Using clouds for metagenomics: A case study
inferredcites →https://doi.org/10.1109/ipdpsw.2014.200openalex-snapshot
Design and Optimization of a Metagenomics Analysis Workflow for NVRAM
inferredcites →https://doi.org/10.1159/000084979openalex-snapshot
Repbase Update, a database of eukaryotic repetitive elements
inferredcites →https://doi.org/10.1186/1471-2105-15-262openalex-snapshot
Clinical PathoScope: rapid alignment and filtration for accurate pathogen identification in clinical samples using unassembled sequencing data
inferredcites →https://doi.org/10.1186/gb-2008-9-3-r56openalex-snapshot
DNA signatures for detecting genetic engineering in bacteria
inferredcites →https://doi.org/10.1186/gb-2014-15-3-r46openalex-snapshot
Kraken: ultrafast metagenomic sequence classification using exact alignments
inferredcites →https://doi.org/10.1186/gm485openalex-snapshot
Metagenomics for pathogen detection in public health
inferredcites →https://doi.org/10.4137/mbi.s10819openalex-snapshot
The Use of Metagenomic Approaches to Analyze Changes in Microbial Communities
inferredcites →https://doi.org/10.7717/peerj.675openalex-snapshot
Unexpected cross-species contamination in genome sequencing projects
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1093/bib/bbx120openalex-snapshot
A review of methods and databases for metagenomic classification and assembly
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