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Quantifying the degree of sharing of genetic and non-genetic causes of gene expression variability across four tissues

https://doi.org/10.1101/053355
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.ajhg.2015.09.004openalex-snapshot
Alternative Splicing QTLs in European and African Populations
inferredcites →https://doi.org/10.1038/35057062openalex-snapshot
Initial sequencing and analysis of the human genome
inferredcites →https://doi.org/10.1038/nature11247openalex-snapshot
An integrated encyclopedia of DNA elements in the human genome
inferredcites →https://doi.org/10.1038/nature11632openalex-snapshot
An integrated map of genetic variation from 1,092 human genomes
inferredcites →https://doi.org/10.1038/nature13182openalex-snapshot
A promoter-level mammalian expression atlas
inferredcites →https://doi.org/10.1038/ng.2394openalex-snapshot
Mapping cis- and trans-regulatory effects across multiple tissues in twins
inferredcites →https://doi.org/10.1038/ng.3162openalex-snapshot
Gene-gene and gene-environment interactions detected by transcriptome sequence analysis in twins
inferredcites →https://doi.org/10.1073/pnas.1530509100openalex-snapshot
Statistical significance for genomewide studies
inferredcites →https://doi.org/10.1086/301844openalex-snapshot
Multipoint Quantitative-Trait Linkage Analysis in General Pedigrees
inferredcites →https://doi.org/10.1086/302570openalex-snapshot
Joint Multipoint Linkage Analysis of Multivariate Qualitative and Quantitative Traits. I. Likelihood Formulation and Simulation Results
inferredcites →https://doi.org/10.1093/bioinformatics/btm108openalex-snapshot
GenABEL: an R library for genome-wide association analysis
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/bts163openalex-snapshot
Matrix eQTL: ultra fast eQTL analysis via large matrix operations
inferredcites →https://doi.org/10.1101/gr.126540.111openalex-snapshot
Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent
inferredcites →https://doi.org/10.1101/gr.135350.111openalex-snapshot
GENCODE: The reference human genome annotation for The ENCODE Project
inferredcites →https://doi.org/10.1126/science.1262110openalex-snapshot
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
inferredcites →https://doi.org/10.1126/science.aaa0355openalex-snapshot
The human transcriptome across tissues and individuals
inferredcites →https://doi.org/10.1186/s12920-015-0152-7openalex-snapshot
Prediction of the gene expression in normal lung tissue by the gene expression in blood
inferredcites →https://doi.org/10.1371/journal.pgen.1000529openalex-snapshot
A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies
inferredcites →https://doi.org/10.1371/journal.pgen.1001276openalex-snapshot
Joint Genetic Analysis of Gene Expression Data with Inferred Cellular Phenotypes
inferredcites →https://doi.org/10.1371/journal.pgen.1001317openalex-snapshot
Single-Tissue and Cross-Tissue Heritability of Gene Expression Via Identity-by-Descent in Related or Unrelated Individuals
inferredcites →https://doi.org/10.1371/journal.pgen.1002431openalex-snapshot
Unraveling the Regulatory Mechanisms Underlying Tissue-Dependent Genetic Variation of Gene Expression
inferredcites →https://doi.org/10.17615/g28n-r219openalex-snapshot
Matrix eQTL: Ultra fast eQTL analysis via large matrix operations

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.ajhg.2019.11.015openalex-snapshot
A Robust Method Uncovers Significant Context-Specific Heritability in Diverse Complex Traits
inferred← citeshttps://doi.org/10.1038/nature24277openalex-snapshot
Genetic effects on gene expression across human tissues
inferred← citeshttps://doi.org/10.1101/074419openalex-snapshot
Distant regulatory effects of genetic variation in multiple human tissues
inferred← citeshttps://doi.org/10.1101/2020.09.22.308262openalex-snapshot
Integrative genomic strategies applied to a lymphoblast cell line model reveal specific transcriptomic signatures associated with clozapine response
inferred← citeshttps://doi.org/10.1371/journal.pone.0202812openalex-snapshot
Cross-tissue eQTL enrichment of associations in schizophrenia
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