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K-mer Motif Multinomial Mixtures, a scalable framework for multiple motif discovery
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-94-011-5014-9_5openalex-snapshot
An Introduction to Variational Methods for Graphical Models
inferredcites →https://doi.org/10.1007/bfb0099421openalex-snapshot
Exchangeability and related topics
inferredcites →https://doi.org/10.1016/0959-437x(94)90098-1openalex-snapshot
Myc—Max—Mad: a transcription factor network controlling cell cycle progression, differentiation and death
inferredcites →https://doi.org/10.1016/j.molcel.2010.05.004openalex-snapshot
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
inferredcites →https://doi.org/10.1038/nature11247openalex-snapshot
An integrated encyclopedia of DNA elements in the human genome
inferredcites →https://doi.org/10.1038/nature14248openalex-snapshot
Integrative analysis of 111 reference human epigenomes
inferredcites →https://doi.org/10.1038/nbt.3519openalex-snapshot
Near-optimal probabilistic RNA-seq quantification
inferredcites →https://doi.org/10.1038/nbt0816-888dopenalex-snapshot
Erratum: Near-optimal probabilistic RNA-seq quantification
inferredcites →https://doi.org/10.1073/pnas.180265397openalex-snapshot
Building a dictionary for genomes: Identification of presumptive regulatory sites by statistical analysis
inferredcites →https://doi.org/10.1080/01621459.2017.1285773openalex-snapshot
Variational Inference: A Review for Statisticians
inferredcites →https://doi.org/10.1093/bioinformatics/16.1.16openalex-snapshot
DNA binding sites: representation and discovery
inferredcites →https://doi.org/10.1093/bioinformatics/btr189openalex-snapshot
MEME-ChIP: motif analysis of large DNA datasets
inferredcites →https://doi.org/10.1093/nar/gkt997openalex-snapshot
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles
inferredcites →https://doi.org/10.1101/003251openalex-snapshot
SeqGL Identifies Context-Dependent Binding Signals in Genome-Wide Regulatory Element Maps
inferredcites →https://doi.org/10.1101/gr.127712.111openalex-snapshot
Sequence and chromatin determinants of cell-type–specific transcription factor binding
inferredcites →https://doi.org/10.1109/tpami.1984.4767596openalex-snapshot
Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images
inferredcites →https://doi.org/10.1186/1471-2105-8-s7-s21openalex-snapshot
A survey of DNA motif finding algorithms
inferredcites →https://doi.org/10.1186/1745-6150-9-4openalex-snapshot
A survey of motif finding Web tools for detecting binding site motifs in ChIP-Seq data
inferredcites →https://doi.org/10.1198/016214503388619094openalex-snapshot
Discovery of Conserved Sequence Patterns Using a Stochastic Dictionary Model
inferredcites →https://doi.org/10.1371/journal.pbio.1002195openalex-snapshot
Big Data: Astronomical or Genomical?
inferredcites →https://doi.org/10.5555/2567709.2502622openalex-snapshot
Stochastic variational inference
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