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W2RAP: a pipeline for high quality, robust assemblies of large complex genomes from short read data
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Genome in a bottle—a human DNA standard
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Comprehensive variation discovery in single human genomes
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Extensive sequencing of seven human genomes to characterize benchmark reference materials
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High-quality draft assemblies of mammalian genomes from massively parallel sequence data
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FLASH: fast length adjustment of short reads to improve genome assemblies
inferredcites →https://doi.org/10.1093/bioinformatics/btt086openalex-snapshot
QUAST: quality assessment tool for genome assemblies
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NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
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GAGE: A critical evaluation of genome assemblies and assembly algorithms
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ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter
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An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
inferredcites →https://doi.org/10.1186/2047-217x-1-18openalex-snapshot
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
inferredcites →https://doi.org/10.1186/s12864-016-2531-7openalex-snapshot
Evaluation of DISCOVAR de novo using a mosquito sample for cost-effective short-read genome assembly
inferredcites →https://doi.org/10.1186/s13104-016-2072-9openalex-snapshot
Optimized Illumina PCR-free library preparation for bacterial whole genome sequencing and analysis of factors influencing de novo assembly
inferredcites →https://doi.org/10.2144/000114310openalex-snapshot
A Method to Simultaneously Construct up to 12 Differently Sized Illumina Nextera Long Mate Pair Libraries with Reduced DNA Input, Time, and Cost
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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