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Evaluation of Chromatin Accessibility in Prefrontal Cortex of Schizophrenia Cases and Controls
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Schizophrenia as a Complex Trait
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Amygdala and Hippocampal Volumes in Adolescents and Adults With Bipolar Disorder
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Association of Genetic Risks for Schizophrenia and Bipolar DisorderWith Specific and Generic Brain Structural Endophenotypes
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Methylome-Wide Association Study of Schizophrenia
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Association of DNA Methylation Differences With Schizophrenia in an Epigenome-Wide Association Study
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From FastQ Data to High‐Confidence Variant Calls: The Genome Analysis Toolkit Best Practices Pipeline
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BEDTools: The Swiss‐Army Tool for Genome Feature Analysis
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Comparative study of regional homogeneity in schizophrenia and major depressive disorder
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Transient expression of the conserved zinc finger gene INSM1 in progenitors and nascent neurons throughout embryonic and adult neurogenesis
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Differential Oestrogen Receptor Binding is Associated with Clinical Outcome in Breast Cancer
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Changes in grey matter development in autism spectrum disorder
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Epigenetics of Schizophrenia
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Exome Sequencing Followed by Large-Scale Genotyping Suggests a Limited Role for Moderately Rare Risk Factors of Strong Effect in Schizophrenia
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Partitioning Heritability of Regulatory and Cell-Type-Specific Variants across 11 Common Diseases
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Inflammation and neurological disease-related genes are differentially expressed in depressed patients with mood disorders and correlate with morphometric and functional imaging abnormalities
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Ventromedial Prefrontal Cortex Processing During Emotional Evaluation in Late-Life Depression: A Longitudinal Functional Magnetic Resonance Imaging Study
inferredcites →https://doi.org/10.1016/j.cell.2007.12.014openalex-snapshot
High-Resolution Mapping and Characterization of Open Chromatin across the Genome
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Genetic Heterogeneity in Human Disease
inferredcites →https://doi.org/10.1016/j.cell.2014.11.021openalex-snapshot
A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
inferredcites →https://doi.org/10.1016/j.cell.2015.04.004openalex-snapshot
Disruptions of Topological Chromatin Domains Cause Pathogenic Rewiring of Gene-Enhancer Interactions
inferredcites →https://doi.org/10.1016/j.cell.2016.07.049openalex-snapshot
Direct GR Binding Sites Potentiate Clusters of TF Binding across the Human Genome
inferredcites →https://doi.org/10.1016/j.celrep.2014.10.015openalex-snapshot
A Role for Noncoding Variation in Schizophrenia
inferredcites →https://doi.org/10.1016/j.cpr.2010.05.007openalex-snapshot
Neurobiological correlates of social functioning in autism
inferredcites →https://doi.org/10.1016/j.ijdevneu.2004.12.012openalex-snapshot
Developmental deficits in social perception in autism: the role of the amygdala and fusiform face area
inferredcites →https://doi.org/10.1016/j.jphysparis.2013.04.003openalex-snapshot
The effect of non-competitive NMDA receptor antagonist MK-801 on neuronal activity in rodent prefrontal cortex: an animal model for cognitive symptoms of schizophrenia
inferredcites →https://doi.org/10.1016/j.molcel.2010.05.004openalex-snapshot
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
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Structural brain features of borderline personality and bipolar disorders
inferredcites →https://doi.org/10.1016/j.schres.2009.06.021openalex-snapshot
Functional and structural brain correlates of theory of mind and empathy deficits in schizophrenia
inferredcites →https://doi.org/10.1016/j.schres.2009.12.022openalex-snapshot
Anatomy of bipolar disorder and schizophrenia: A meta-analysis
inferredcites →https://doi.org/10.1016/j.tig.2008.07.004openalex-snapshot
MicroRNA target site polymorphisms and human disease
inferredcites →https://doi.org/10.1016/s0140-6736(09)60072-6openalex-snapshot
Common genetic determinants of schizophrenia and bipolar disorder in Swedish families: a population-based study
inferredcites →https://doi.org/10.1017/s0033291706008385openalex-snapshot
Recurrence risks for schizophrenia in a Swedish National Cohort
inferredcites →https://doi.org/10.1021/pr400246topenalex-snapshot
Neuron Enriched Nuclear Proteome Isolated from Human Brain
inferredcites →https://doi.org/10.1038/mp.2011.11openalex-snapshot
Schizophrenia susceptibility alleles are enriched for alleles that affect gene expression in adult human brain
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Functional anatomy of ventromedial prefrontal cortex: implications for mood and anxiety disorders
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Epigenetics as a unifying principle in the aetiology of complex traits and diseases
inferredcites →https://doi.org/10.1038/nature09906openalex-snapshot
Mapping and analysis of chromatin state dynamics in nine human cell types
inferredcites →https://doi.org/10.1038/nature10530openalex-snapshot
A high-resolution map of human evolutionary constraint using 29 mammals
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Differential oestrogen receptor binding is associated with clinical outcome in breast cancer
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DNase I sensitivity QTLs are a major determinant of human expression variation
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The accessible chromatin landscape of the human genome
inferredcites →https://doi.org/10.1038/nature12929openalex-snapshot
De novo mutations in schizophrenia implicate synaptic networks
inferredcites →https://doi.org/10.1038/nature12975openalex-snapshot
A polygenic burden of rare disruptive mutations in schizophrenia
inferredcites →https://doi.org/10.1038/nature13595openalex-snapshot
Biological insights from 108 schizophrenia-associated genetic loci
inferredcites →https://doi.org/10.1038/nature14248openalex-snapshot
Integrative analysis of 111 reference human epigenomes
inferredcites →https://doi.org/10.1038/nature14590openalex-snapshot
Single-cell chromatin accessibility reveals principles of regulatory variation
inferredcites →https://doi.org/10.1038/nature16549openalex-snapshot
Schizophrenia risk from complex variation of complement component 4
inferredcites →https://doi.org/10.1038/nature19847openalex-snapshot
Chromosome conformation elucidates regulatory relationships in developing human brain
inferredcites →https://doi.org/10.1038/nbt.3853openalex-snapshot
CRISPR–Cas9 epigenome editing enables high-throughput screening for functional regulatory elements in the human genome
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Partitioning heritability by functional annotation using genome-wide association summary statistics
inferredcites →https://doi.org/10.1038/ng.3725openalex-snapshot
Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects
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Puzzling over schizophrenia: Schizophrenia as a pathway disease
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nmeth.2688openalex-snapshot
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
inferredcites →https://doi.org/10.1038/nn.3995openalex-snapshot
Regulation of chromatin accessibility and Zic binding at enhancers in the developing cerebellum
inferredcites →https://doi.org/10.1038/nn.4181openalex-snapshot
Mapping DNA methylation across development, genotype and schizophrenia in the human frontal cortex
inferredcites →https://doi.org/10.1038/nn.4267openalex-snapshot
Rare loss-of-function variants in SETD1A are associated with schizophrenia and developmental disorders
inferredcites →https://doi.org/10.1038/nn.4399openalex-snapshot
Gene expression elucidates functional impact of polygenic risk for schizophrenia
inferredcites →https://doi.org/10.1038/nn.4402openalex-snapshot
Increased burden of ultra-rare protein-altering variants among 4,877 individuals with schizophrenia
inferredcites →https://doi.org/10.1038/nprot.2014.083openalex-snapshot
Motif-based analysis of large nucleotide data sets using MEME-ChIP
inferredcites →https://doi.org/10.1038/s41588-018-0059-2openalex-snapshot
Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection
inferredcites →https://doi.org/10.1056/nejmp0806284openalex-snapshot
Common Genetic Variation and Human Traits
inferredcites →https://doi.org/10.1073/pnas.0903103106openalex-snapshot
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
inferredcites →https://doi.org/10.1073/pnas.1001702107openalex-snapshot
Developmental regulation and individual differences of neuronal H3K4me3 epigenomes in the prefrontal cortex
inferredcites →https://doi.org/10.1073/pnas.1322563111openalex-snapshot
Searching for missing heritability: Designing rare variant association studies
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btv722openalex-snapshot
Fast and efficient QTL mapper for thousands of molecular phenotypes
inferredcites →https://doi.org/10.1093/brain/122.4.593openalex-snapshot
The neuropathology of schizophrenia
inferredcites →https://doi.org/10.1093/brain/awh332openalex-snapshot
Mapping the brain in autism. A voxel-based MRI study of volumetric differences and intercorrelations in autism
inferredcites →https://doi.org/10.1093/brain/awm184openalex-snapshot
Anatomically related grey and white matter abnormalities in adolescent-onset schizophrenia
inferredcites →https://doi.org/10.1093/hmg/ddn288openalex-snapshot
Practical aspects of imputation-driven meta-analysis of genome-wide association studies
inferredcites →https://doi.org/10.1093/hmg/ddn351openalex-snapshot
Disruption of the neurexin 1 gene is associated with schizophrenia
inferredcites →https://doi.org/10.1093/hmg/ddx103openalex-snapshot
Open chromatin profiling of human postmortem brain infers functional roles for non-coding schizophrenia loci
inferredcites →https://doi.org/10.1093/nar/gkv1275openalex-snapshot
The UCSC Genome Browser database: 2016 update
inferredcites →https://doi.org/10.1101/091264openalex-snapshot
Pathways analyses of schizophrenia GWAS focusing on known and novel drug targets
inferredcites →https://doi.org/10.1101/gr.096297.109openalex-snapshot
A positive but complex association between meiotic double-strand break hotspots and open chromatin in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1101/gr.121541.111openalex-snapshot
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
inferredcites →https://doi.org/10.1101/gr.131201.111openalex-snapshot
Effects of sequence variation on differential allelic transcription factor occupancy and gene expression
inferredcites →https://doi.org/10.1111/bdi.12007openalex-snapshot
Impaired sustained attention in euthymic bipolar disorder patients and non‐affected relatives: an fMRI study
inferredcites →https://doi.org/10.1111/j.1469-7610.2009.02086.xopenalex-snapshot
White matter fractional anisotrophy differences and correlates of diagnostic symptoms in autism
inferredcites →https://doi.org/10.1111/j.1742-4658.2011.08128.xopenalex-snapshot
Structure and function of active chromatin and DNase I hypersensitive sites
inferredcites →https://doi.org/10.1126/science.1184655openalex-snapshot
Heritable Individual-Specific and Allele-Specific Chromatin Signatures in Humans
inferredcites →https://doi.org/10.1126/science.1222794openalex-snapshot
Systematic Localization of Common Disease-Associated Variation in Regulatory DNA
inferredcites →https://doi.org/10.1126/science.1237905openalex-snapshot
Global Epigenomic Reconfiguration During Mammalian Brain Development
inferredcites →https://doi.org/10.1146/annurev.bi.57.070188.001111openalex-snapshot
NUCLEASE HYPERSENSITIVE SITES IN CHROMATIN
inferredcites →https://doi.org/10.1176/appi.ajp.162.12.2233openalex-snapshot
Regional Deficits in Brain Volume in Schizophrenia: A Meta-Analysis of Voxel-Based Morphometry Studies
inferredcites →https://doi.org/10.1176/appi.ajp.2017.17030283openalex-snapshot
Psychiatric Genomics: An Update and an Agenda
inferredcites →https://doi.org/10.1177/0004867412440191openalex-snapshot
Size and shape of the caudate nucleus in individuals with bipolar affective disorder
inferredcites →https://doi.org/10.1177/0883073812451496openalex-snapshot
The Effect of Diagnosis, Age, and Symptom Severity on Cortical Surface Area in the Cingulate Cortex and Insula in Autism Spectrum Disorders
inferredcites →https://doi.org/10.1186/1471-2202-9-42openalex-snapshot
Isolation of neuronal chromatin from brain tissue
inferredcites →https://doi.org/10.1186/gb-2010-11-3-r25openalex-snapshot
A scaling normalization method for differential expression analysis of RNA-seq data
inferredcites →https://doi.org/10.1186/gb-2012-13-8-418openalex-snapshot
An encyclopedia of mouse DNA elements (Mouse ENCODE)
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1186/s13059-016-1041-xopenalex-snapshot
An integrated genetic-epigenetic analysis of schizophrenia: evidence for co-localization of genetic associations and differential DNA methylation
inferredcites →https://doi.org/10.1186/s13742-015-0047-8openalex-snapshot
Second-generation PLINK: rising to the challenge of larger and richer datasets
inferredcites →https://doi.org/10.1371/journal.pbio.1001046openalex-snapshot
A User's Guide to the Encyclopedia of DNA Elements (ENCODE)
inferredcites →https://doi.org/10.1371/journal.pgen.0020190openalex-snapshot
Population Structure and Eigenanalysis
inferredcites →https://doi.org/10.1385/1-59259-364-x:149openalex-snapshot
Statistical Methods for Identifying Differentially Expressed Genes in DNA Microarrays
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
inferredcites →https://doi.org/10.18637/jss.v045.i03openalex-snapshot
mice: Multivariate Imputation by Chained Equations inR
inferredcites →https://doi.org/10.18637/jss.v045.i07openalex-snapshot
Amelia II: A Program for Missing Data
inferredcites →https://doi.org/10.3389/fgene.2012.00118openalex-snapshot
Using summary data from the Danish National Registers to estimate heritabilities for schizophrenia, bipolar disorder, and major depressive disorder
inferredcites →https://doi.org/10.3389/fnsys.2013.00015openalex-snapshot
Is autism a disease of the cerebellum? An integration of clinical and pre-clinical research
inferredcites →https://doi.org/10.3791/914openalex-snapshot
Neuronal Nuclei Isolation from Human Postmortem Brain Tissue
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Neuronal Nuclei Isolation from Human Postmortem Brain Tissue
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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New considerations for hiPSC-based models of neuropsychiatric disorders
inferred← citeshttps://doi.org/10.1038/s41380-018-0040-6openalex-snapshot
Biological annotation of genetic loci associated with intelligence in a meta-analysis of 87,740 individuals
inferred← citeshttps://doi.org/10.1038/s41588-018-0090-3openalex-snapshot
Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression
inferred← citeshttps://doi.org/10.1101/445874openalex-snapshot
Comparative genetic architectures of schizophrenia in East Asian and European populations
inferred← citeshttps://doi.org/10.1186/s12864-020-6752-4openalex-snapshot
Identifying branch-specific positive selection throughout the regulatory genome using an appropriate proxy neutral
inferred← citeshttps://doi.org/10.3389/fpsyt.2025.1671122openalex-snapshot
The clinical use of epigenetics in psychiatry: a narrative review of epigenetic mechanisms, key candidate genes, and precision psychiatry
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