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Adaptive evolution of animal proteins over development: support for the Darwin selection opportunity hypothesis of Evo-Devo
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/(sici)1521-1878(199907)21:7<604::aid-bies9>3.0.co;2-uopenalex-snapshot
Vertebrate evolution: The developmental origins of adult variation
inferredcites →https://doi.org/10.1007/pl00006320openalex-snapshot
Synonymous and nonsynonymous rate variation in nuclear genes of mammals
inferredcites →https://doi.org/10.1016/j.cell.2008.06.030openalex-snapshot
Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution
inferredcites →https://doi.org/10.1016/j.csda.2004.04.001openalex-snapshot
A normal approximation for the chi-square distribution
inferredcites →https://doi.org/10.1016/j.devcel.2012.04.004openalex-snapshot
Developmental Milestones Punctuate Gene Expression in the Caenorhabditis Embryo
inferredcites →https://doi.org/10.1016/j.tree.2006.05.001openalex-snapshot
Evo-devo and constraints on selection
inferredcites →https://doi.org/10.1016/j.tree.2012.03.007openalex-snapshot
The evolution of early animal embryos: conservation or divergence?
inferredcites →https://doi.org/10.1016/s0168-9525(02)02722-1openalex-snapshot
The Ka/Ks ratio: diagnosing the form of sequence evolution
inferredcites →https://doi.org/10.1017/cbo9781139164856openalex-snapshot
The Changing Role of the Embryo in Evolutionary Thought
inferredcites →https://doi.org/10.1038/35049594openalex-snapshot
Evo-devo: the evolution of a new discipline
inferredcites →https://doi.org/10.1038/361490a0openalex-snapshot
The zootype and the phylotypic stage
inferredcites →https://doi.org/10.1038/nature09632openalex-snapshot
A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns
inferredcites →https://doi.org/10.1038/nature09634openalex-snapshot
Gene expression divergence recapitulates the developmental hourglass model
inferredcites →https://doi.org/10.1038/nature09715openalex-snapshot
The developmental transcriptome of Drosophila melanogaster
inferredcites →https://doi.org/10.1038/nature11394openalex-snapshot
A transcriptomic hourglass in plant embryogenesis
inferredcites →https://doi.org/10.1038/nature16994openalex-snapshot
The mid-developmental transition and the evolution of animal body plans
inferredcites →https://doi.org/10.1038/ncomms1248openalex-snapshot
Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis
inferredcites →https://doi.org/10.1038/nrg2063openalex-snapshot
The evolutionary significance of cis-regulatory mutations
inferredcites →https://doi.org/10.1038/nrg2219openalex-snapshot
Evo–devo: extending the evolutionary synthesis
inferredcites →https://doi.org/10.1038/nrg2703openalex-snapshot
Origin and evolution of the adaptive immune system: genetic events and selective pressures
inferredcites →https://doi.org/10.1038/nrg3802openalex-snapshot
Evolutionary dynamics of coding and non-coding transcriptomes
inferredcites →https://doi.org/10.1038/s41559-017-0113openalex-snapshot
Developmental constraints shape the evolution of the nematode mid-developmental transition
inferredcites →https://doi.org/10.1038/s41559-017-0318-0openalex-snapshot
Constrained vertebrate evolution by pleiotropic genes
inferredcites →https://doi.org/10.1038/sj.hdy.6800802openalex-snapshot
The changing role of the embryo in evolutionary thought: roots of Evo-Devo
inferredcites →https://doi.org/10.1080/00031305.1986.10475420openalex-snapshot
A Note on the Transformation of Chi-Squared Variables to Normality
inferredcites →https://doi.org/10.1093/bioinformatics/btn615openalex-snapshot
AmiGO: online access to ontology and annotation data
inferredcites →https://doi.org/10.1093/database/bar030openalex-snapshot
Ensembl BioMarts: a hub for data retrieval across taxonomic space
inferredcites →https://doi.org/10.1093/gbe/evq019openalex-snapshot
Relaxed Purifying Selection and Possibly High Rate of Adaptation in Primate Lineage-Specific Genes
inferredcites →https://doi.org/10.1093/gbe/evy177openalex-snapshot
Developmental Constraints on Genome Evolution in Four Bilaterian Model Species
inferredcites →https://doi.org/10.1093/icb/21.2.391openalex-snapshot
Morphogenetic Movements and Fate Maps of Vertebrates
inferredcites →https://doi.org/10.1093/molbev/msi237openalex-snapshot
Evaluation of an Improved Branch-Site Likelihood Method for Detecting Positive Selection at the Molecular Level
inferredcites →https://doi.org/10.1093/molbev/msq115openalex-snapshot
The Effect of Insertions, Deletions, and Alignment Errors on the Branch-Site Test of Positive Selection
inferredcites →https://doi.org/10.1093/molbev/mst062openalex-snapshot
The Branch-Site Test of Positive Selection Is Surprisingly Robust but Lacks Power under Synonymous Substitution Saturation and Variation in GC
inferredcites →https://doi.org/10.1093/molbev/mst080openalex-snapshot
Evidence for Polygenic Adaptation to Pathogens in the Human Genome
inferredcites →https://doi.org/10.1093/molbev/msu141openalex-snapshot
Patterns of Positive Selection in Seven Ant Genomes
inferredcites →https://doi.org/10.1093/molbev/msv012openalex-snapshot
Evidence for Active Maintenance of Phylotranscriptomic Hourglass Patterns in Animal and Plant Embryogenesis
inferredcites →https://doi.org/10.1093/molbev/msx083openalex-snapshot
Detection of Pathways Affected by Positive Selection in Primate Lineages Ancestral to Humans
inferredcites →https://doi.org/10.1093/molbev/msx266openalex-snapshot
Mapping Selection within Drosophila melanogaster Embryo’s Anatomy
inferredcites →https://doi.org/10.1093/nar/gkn653openalex-snapshot
PID: The Pathway Interaction Database
inferredcites →https://doi.org/10.1093/nar/gkr1074openalex-snapshot
WikiPathways: building research communities on biological pathways
inferredcites →https://doi.org/10.1093/nar/gkt1065openalex-snapshot
Selectome update: quality control and computational improvements to a database of positive selection
inferredcites →https://doi.org/10.1093/nar/gkt1076openalex-snapshot
Data, information, knowledge and principle: back to metabolism in KEGG
inferredcites →https://doi.org/10.1093/nar/gkt1103openalex-snapshot
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases
inferredcites →https://doi.org/10.1093/nar/gkt1324openalex-snapshot
Editorial: NAR Surveys the Past, Present and Future of Restriction Endonucleases
inferredcites →https://doi.org/10.1093/nar/gkv1164openalex-snapshot
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004131openalex-snapshot
Genome Evolution and Developmental Constraint in Caenorhabditis elegans
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004148openalex-snapshot
Codon-Substitution Models for Detecting Molecular Adaptation at Individual Sites Along Specific Lineages
inferredcites →https://doi.org/10.1098/rstb.2015.0473openalex-snapshot
Perspectives on the history of evo-devo and the contemporary research landscape in the genomics era
inferredcites →https://doi.org/10.1101/gr.170100.113openalex-snapshot
Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data
inferredcites →https://doi.org/10.1103/physreve.67.031902openalex-snapshot
Iterative signature algorithm for the analysis of large-scale gene expression data
inferredcites →https://doi.org/10.1111/j.1096-3642.1922.tb00464.xopenalex-snapshot
The Theory of Recapitulation: A Critical Re-statement of the Biogenetic Law.
inferredcites →https://doi.org/10.1111/j.1558-5646.2007.00105.xopenalex-snapshot
THE LOCUS OF EVOLUTION: EVO DEVO AND THE GENETICS OF ADAPTATION
inferredcites →https://doi.org/10.1126/science.aal3345openalex-snapshot
A genetic signature of the evolution of loss of flight in the Galapagos cormorant
inferredcites →https://doi.org/10.1146/annurev-genet-111212-133526openalex-snapshot
Detecting Natural Selection in Genomic Data
inferredcites →https://doi.org/10.1186/1471-2105-10-47openalex-snapshot
A general modular framework for gene set enrichment analysis
inferredcites →https://doi.org/10.1186/1741-7007-7-42openalex-snapshot
Ontogeny and phylogeny: molecular signatures of selection, constraint, and temporal pleiotropy in the development of Drosophila
inferredcites →https://doi.org/10.1186/1741-7007-8-133openalex-snapshot
Functional diversity in the color vision of cichlid fishes
inferredcites →https://doi.org/10.1186/1753-6561-3-s7-s96openalex-snapshot
Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16
inferredcites →https://doi.org/10.1186/s13227-018-0095-0openalex-snapshot
Embryonic lethality is not sufficient to explain hourglass-like conservation of vertebrate embryos
inferredcites →https://doi.org/10.1242/dev.033183openalex-snapshot
The maternal-to-zygotic transition: a play in two acts
inferredcites →https://doi.org/10.1242/dev.107318openalex-snapshot
The developmental hourglass model: a predictor of the basic body plan?
inferredcites →https://doi.org/10.1242/dev.1994.supplement.135openalex-snapshot
Temporal colinearity and the phylotypic progression: a basis for the stability of a vertebrate Bauplan and the evolution of morphologies through heterochrony
inferredcites →https://doi.org/10.1371/journal.pgen.1000311openalex-snapshot
Developmental Constraints on Vertebrate Genome Evolution
inferredcites →https://doi.org/10.1371/journal.pgen.1003476openalex-snapshot
The Hourglass and the Early Conservation Models—Co-Existing Patterns of Developmental Constraints in Vertebrates
inferredcites →https://doi.org/10.1371/journal.pgen.1004412openalex-snapshot
A Population Genetic Signal of Polygenic Adaptation
inferredcites →https://doi.org/10.1537/ase1887.22.495openalex-snapshot
The descent of man and selection in relation to sex
inferredcites →https://doi.org/10.5860/choice.34-1536openalex-snapshot
The shape of life: genes, development, and the evolution of animal form
inferredcites →https://doi.org/10.5962/bhl.title.112232openalex-snapshot
Über Entwickelungsgeschichte der Thiere : Beobachtung und Reflexion /
inferredcites →https://doi.org/10.5962/bhl.title.2092openalex-snapshot
The descent of man, and selection in relation to sex
inferredcites →https://doi.org/10.5962/bhl.title.6303openalex-snapshot
Über Entwickelungsgeschichte der Thiere. Beobachtung und Reflexion
inferredcites →https://doi.org/10.7208/chicago/9780226256573.001.0001openalex-snapshot
The Shape of Life
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1016/j.isci.2024.109355openalex-snapshot
Quantitative proteome dynamics across embryogenesis in a model chordate
inferred← citeshttps://doi.org/10.1093/gbe/evy177openalex-snapshot
Developmental Constraints on Genome Evolution in Four Bilaterian Model Species
inferred← citeshttps://doi.org/10.1093/molbev/msz065openalex-snapshot
Gene Expression Does Not Support the Developmental Hourglass Model in Three Animals with Spiralian Development
inferred← citeshttps://doi.org/10.1126/sciadv.add2911openalex-snapshot
De novo human brain enhancers created by single-nucleotide mutations
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