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DNA metabarcoding potentially reveals multi-assemblage eutrophication responses in an eastern North American river

https://doi.org/10.1101/186452
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Outgoing claims: the papers this work cites, builds on, or argues with.

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The ecology of environmental DNA and implications for conservation genetics
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Standard Methods for the Examination of Water and Wastewater
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Long-term response of surface water acid neutralizing capacity in a central Appalachian (USA) river basin to declining acid deposition
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Diatom metrics for monitoring eutrophication in rivers of the United States
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A nutrient biotic index (NBI) for use with benthic macroinvertebrate communities
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Assessing ecological status with diatoms DNA metabarcoding: Scaling-up on a WFD monitoring network (Mayotte island, France)
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Metabarcoding of benthic eukaryote communities predicts the ecological condition of estuaries
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Threats to the running water ecosystems of the world
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Neutral metacommunity models predict fish diversity patterns in Mississippi–Missouri basin
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Environmental DNA reveals that rivers are conveyer belts of biodiversity information
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Detection of Termites and Other Insects Consumed by African Great Apes using Molecular Fecal Analysis
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The Didymo story: the role of low dissolved phosphorus in the formation ofDidymosphenia geminatablooms
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Does DNA barcoding improve performance of traditional stream bioassessment metrics?
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Utility of environmental DNA for monitoring rare and indicator macroinvertebrate species
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Search and clustering orders of magnitude faster than BLAST
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Cutting a Gordian Knot: Emended Classification and Description of the Genus Flavobacterium, Emended Description of the Family Flavobacteriaceae, and Proposal of Flavobacterium hydatis nom. nov. (Basonym, Cytophaga aquatilis Strohl and Tait 1978)
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Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies
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Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding
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Taxonomy‐free molecular diatom index for high‐throughput eDNA biomonitoring
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Environmental DNA genetic monitoring of the nuisance freshwater diatom, Didymosphenia geminata, in eastern North American streams
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Contrasting effects of natural and anthropogenic stressors on beta diversity in river organisms
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Estimating sampling bias when using electrofishing to catch stone loach
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Temporal variability in the diversity and composition of stream bacterioplankton communities
inferredcites →https://doi.org/10.1111/j.1529-8817.2007.00341.xopenalex-snapshot
UNIVERSAL PRIMERS AMPLIFY A 23S rDNA PLASTID MARKER IN EUKARYOTIC ALGAE AND CYANOBACTERIA1
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Taxon‐specific PCR for DNA barcoding arthropod prey in bat faeces
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A general theory of multimetric indices and their properties
inferredcites →https://doi.org/10.1127/0003-9136/2005/0162-0073openalex-snapshot
Electrofishing versus gillnet sampling for the assessment of fish assemblages in large rivers
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Free-Living and Particle-Associated Bacterioplankton in Large Rivers of the Mississippi River Basin Demonstrate Biogeographic Patterns
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Predictions on the effect of common carp (Cyprinus carpio) exclusion on water quality, zooplankton, and submergent macrophytes in a Great Lakes wetland
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The River Continuum Concept
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Questions and Comments on the River Continuum Concept
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Predictions on the effect of common carp (Cyprinus carpio) exclusion on water quality, zooplankton, and submergent macrophytes in a Great Lakes wetland
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Dispersal and gene flow in free-living marine nematodes
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Taxonomic Reference Libraries for Environmental Barcoding: A Best Practice Example from Diatom Research
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Patterns of variation in diversity of the Mississippi river microbiome over 1,300 kilometers
inferredcites →https://doi.org/10.1371/journal.pone.0175186openalex-snapshot
Aquatic environmental DNA detects seasonal fish abundance and habitat preference in an urban estuary
inferredcites →https://doi.org/10.1577/1548-8675(1989)009<0101:daaofa>2.3.co;2openalex-snapshot
Distribution and Abundance of Fishes Associated with Submersed Aquatic Plants in the Potomac River
inferredcites →https://doi.org/10.1890/06-1746.1openalex-snapshot
ENVIRONMENTAL CONTROLS ON THE LANDSCAPE-SCALE BIOGEOGRAPHY OF STREAM BACTERIAL COMMUNITIES
inferredcites →https://doi.org/10.2307/1352409openalex-snapshot
The Asiatic Clam (Corbicula fluminea) Invasion and System-Level Ecological Change in the Potomac River Estuary near Washington, D. C.
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Inputs, Transformations, and Transport of Nitrogen and Phosphorus in Chesapeake Bay and Selected Tributaries
inferredcites →https://doi.org/10.3389/fmicb.2015.01027openalex-snapshot
Next-generation sequencing (NGS) for assessment of microbial water quality: current progress, challenges, and future opportunities
inferredcites →https://doi.org/10.4324/9780203784112openalex-snapshot
Determining the Economic Value of Water
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US Environmental Protection Agency
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Determining the economic value of water: concepts and methods

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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A comprehensive review on the quality and quantity assessment of the Narmada River of India: Current status, technological advancement, efforts and initiatives, challenges, and future outlook
inferred← citeshttps://doi.org/10.1101/261727openalex-snapshot
Environmental DNA reveals the structure of phytoplankton assemblages along a 2900-km transect in the Mississippi River
inferred← citeshttps://doi.org/10.11609/jott.7837.14.5.21102-21116openalex-snapshot
Environmental DNA as a tool for biodiversity monitoring in aquatic ecosystems – a review
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