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Rethinking the role of lipids in lager yeast cells during beer fermentation from a transcriptome and systems biology perspective

https://doi.org/10.1101/2020.01.28.922898

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/1873-3468.12996openalex-snapshot

Lipid droplet‐mediated lipid and protein homeostasis in budding yeast

inferredcites →https://doi.org/10.1002/j.2050-0416.1982.tb04123.xopenalex-snapshot

LIPID COMPOSITION OF AEROBICALLY AND ANAEROBICALLY PROPAGATED BREWER'S BOTTOM YEAST

inferredcites →https://doi.org/10.1007/11569596_31openalex-snapshot

Computing Communities in Large Networks Using Random Walks

inferredcites →https://doi.org/10.1007/bf00169336openalex-snapshot

Lipids as modulators of ethanol tolerance in yeast

inferredcites →https://doi.org/10.1007/bf01583843openalex-snapshot

Effects of heat shock and ethanol stress on the viability of aSaccharomyces uvarum (carlsbergensis) brewing yeast strain during fermentation of high gravity wort

inferredcites →https://doi.org/10.1007/s00253-009-2223-1openalex-snapshot

Tolerance and stress response to ethanol in the yeast Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1007/s00253-010-2594-3openalex-snapshot

Mechanisms of ethanol tolerance in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1007/s10295-011-0999-3openalex-snapshot

Very high gravity (VHG) ethanolic brewing and fermentation: a research update

inferredcites →https://doi.org/10.1007/s13238-011-1061-yopenalex-snapshot

Interactomic study on interaction between lipid droplets and mitochondria

inferredcites →https://doi.org/10.1016/0378-1097(95)00431-9openalex-snapshot

The heat shock and ethanol stress responses of yeast exhibit extensive similarity and functional overlap

inferredcites →https://doi.org/10.1016/j.bbalip.2011.07.015openalex-snapshot

Lipid particles/droplets of the yeast Saccharomyces cerevisiae revisited: Lipidome meets Proteome

inferredcites →https://doi.org/10.1016/j.bbamcr.2009.01.008openalex-snapshot

Regulation of autophagy in yeast Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1016/j.bbamcr.2015.01.005openalex-snapshot

Mitophagy in yeast: Molecular mechanisms and physiological role

inferredcites →https://doi.org/10.1016/j.ceb.2015.04.017openalex-snapshot

Lipid droplet–organelle interactions: emerging roles in lipid metabolism

inferredcites →https://doi.org/10.1016/j.cell.2016.08.027openalex-snapshot

Lipid Biosynthesis Coordinates a Mitochondrial-to-Cytosolic Stress Response

inferredcites →https://doi.org/10.1016/j.chembiol.2015.02.007openalex-snapshot

Quantitative Analysis of Proteome and Lipidome Dynamics Reveals Functional Regulation of Global Lipid Metabolism

inferredcites →https://doi.org/10.1016/j.devcel.2015.11.010openalex-snapshot

Role for Lipid Droplet Biogenesis and Microlipophagy in Adaptation to Lipid Imbalance in Yeast

inferredcites →https://doi.org/10.1016/j.febslet.2010.02.013openalex-snapshot

The Cvt pathway as a model for selective autophagy

inferredcites →https://doi.org/10.1016/j.febslet.2014.11.050openalex-snapshot

Storage lipid synthesis is necessary for autophagy induced by nitrogen starvation

inferredcites →https://doi.org/10.1016/j.femsyr.2004.07.004openalex-snapshot

Two-dimensional protein map of an ?ale?-brewing yeast strain: proteome dynamics during fermentation

inferredcites →https://doi.org/10.1016/j.ijfoodmicro.2006.02.002openalex-snapshot

Relationship between ethanol tolerance, H+-ATPase activity and the lipid composition of the plasma membrane in different wine yeast strains

inferredcites →https://doi.org/10.1016/j.jbiosc.2010.05.011openalex-snapshot

Genome-wide expression analysis of Saccharomyces pastorianus orthologous genes using oligonucleotide microarrays

inferredcites →https://doi.org/10.1016/j.molcel.2012.08.016openalex-snapshot

The Membrane Stress Response Buffers Lethal Effects of Lipid Disequilibrium by Reprogramming the Protein Homeostasis Network

inferredcites →https://doi.org/10.1016/j.renene.2018.06.062openalex-snapshot

A review of recent advances in high gravity ethanol fermentation

inferredcites →https://doi.org/10.1016/s0922-338x(97)86756-6openalex-snapshot

Ethanol-induced water stress in yeast

inferredcites →https://doi.org/10.1038/cdd.2012.31openalex-snapshot

A higher spirit: avoiding yeast suicide during alcoholic fermentation

inferredcites →https://doi.org/10.1038/nrm3696openalex-snapshot

The autophagosome: origins unknown, biogenesis complex

inferredcites →https://doi.org/10.1042/bj20090785openalex-snapshot

Conditions of endoplasmic reticulum stress stimulate lipid droplet formation in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1046/j.1365-2672.1999.00793.xopenalex-snapshot

Relationship between lipid composition, frequency of ethanol‐induced respiratory deficient mutants, and ethanol tolerance in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1074/jbc.m111.280156openalex-snapshot

Mitophagy Plays an Essential Role in Reducing Mitochondrial Production of Reactive Oxygen Species and Mutation of Mitochondrial DNA by Maintaining Mitochondrial Quantity and Quality in Yeast

inferredcites →https://doi.org/10.1080/15548627.2016.1190074openalex-snapshot

Autophagy regulation depends on ER homeostasis controlled by lipid droplets

inferredcites →https://doi.org/10.1083/jcb.200907074openalex-snapshot

Membrane expansion alleviates endoplasmic reticulum stress independently of the unfolded protein response

inferredcites →https://doi.org/10.1083/jcb.201508102openalex-snapshot

Lipid droplet–mediated ER homeostasis regulates autophagy and cell survival during starvation

inferredcites →https://doi.org/10.1089/omi.2011.0118openalex-snapshot

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

inferredcites →https://doi.org/10.1091/mbc.8.9.1805openalex-snapshot

The unfolded protein response coordinates the production of endoplasmic reticulum protein and endoplasmic reticulum membrane.

inferredcites →https://doi.org/10.1091/mbc.e08-04-0363openalex-snapshot

Piecemeal Microautophagy of the Nucleus Requires the Core Macroautophagy Genes

inferredcites →https://doi.org/10.1093/bioinformatics/btg405openalex-snapshot

affy—analysis of Affymetrix GeneChip data at the probe level

inferredcites →https://doi.org/10.1093/bioinformatics/btm254openalex-snapshot

GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor

inferredcites →https://doi.org/10.1093/bioinformatics/btn647openalex-snapshot

arrayQualityMetrics—a bioconductor package for quality assessment of microarray data

inferredcites →https://doi.org/10.1093/bioinformatics/btq064openalex-snapshot

GOSemSim: an R package for measuring semantic similarity among GO terms and gene products

inferredcites →https://doi.org/10.1093/bioinformatics/btw313openalex-snapshot

Complex heatmaps reveal patterns and correlations in multidimensional genomic data

inferredcites →https://doi.org/10.1093/femsyr/foz063openalex-snapshot

Lager-brewing yeasts in the era of modern genetics

inferredcites →https://doi.org/10.1093/nar/gki005openalex-snapshot

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

inferredcites →https://doi.org/10.1093/nar/gkv007openalex-snapshot

limma powers differential expression analyses for RNA-sequencing and microarray studies

inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

inferredcites →https://doi.org/10.1111/1751-7915.13032openalex-snapshot

Membrane fluidification by ethanol stress activates unfolded protein response in yeasts

inferredcites →https://doi.org/10.1111/j.1567-1364.2008.00371.xopenalex-snapshot

The oxidative stress response of a lager brewing yeast strain during industrial propagation and fermentation

inferredcites →https://doi.org/10.1111/j.1574-6968.1994.tb07255.xopenalex-snapshot

Relationship between ethanol tolerance, lipid composition and plasma membrane fluidity in Saccharomyces cerevisiae and Kloeckera apiculata

inferredcites →https://doi.org/10.1111/j.1574-6976.2007.00076.xopenalex-snapshot

Yeast responses to stresses associated with industrial brewery handling: Figure 1

inferredcites →https://doi.org/10.1111/j.2517-6161.1995.tb02031.xopenalex-snapshot

Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

inferredcites →https://doi.org/10.1126/science.1073374openalex-snapshot

Hierarchical Organization of Modularity in Metabolic Networks

inferredcites →https://doi.org/10.1128/aem.00586-10openalex-snapshot

Comparative Transcriptomic and Proteomic Profiling of Industrial Wine Yeast Strains

inferredcites →https://doi.org/10.1128/aem.02920-05openalex-snapshot

Induction of Autophagy by Second-Fermentation Yeasts during Elaboration of Sparkling Wines

inferredcites →https://doi.org/10.1194/jlr.m050229openalex-snapshot

High confidence proteomic analysis of yeast LDs identifies additional droplet proteins and reveals connections to dolichol synthesis and sterol acetylation

inferredcites →https://doi.org/10.1242/jcs.076836openalex-snapshot

Lipid droplets are functionally connected to the endoplasmic reticulum in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.12688/f1000research.20887.2openalex-snapshot

RCy3: Network biology using Cytoscape from within R

inferredcites →https://doi.org/10.12688/f1000research.20887.3openalex-snapshot

RCy3: Network biology using Cytoscape from within R

inferredcites →https://doi.org/10.1371/journal.pcbi.0030059openalex-snapshot

The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics

inferredcites →https://doi.org/10.1534/g3.111.000836openalex-snapshot

Genome-wide Fitness Profiles Reveal a Requirement for Autophagy During Yeast Fermentation

inferredcites →https://doi.org/10.1534/genetics.112.143362openalex-snapshot

Lipid Droplets and Peroxisomes: Key Players in Cellular Lipid Homeostasis or A Matter of Fat—Store ’em Up or Burn ’em Down

inferredcites →https://doi.org/10.3389/fgene.2020.00002openalex-snapshot

Does Inter-Organellar Proteostasis Impact Yeast Quality and Performance During Beer Fermentation?

inferredcites →https://doi.org/10.4014/jmb.1806.06014openalex-snapshot

Ethanol induces autophagy regulated by mitochondrial ROS in Saccharomyces cerevisiae

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