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Phylogenomic Discordance in the Eared Seals is best explained by Incomplete Lineage Sorting following Explosive Radiation in the Southern Hemisphere
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1006/mpev.2001.1012openalex-snapshot
Phylogenetic Relationships within the Eared Seals (Otariidae: Carnivora): Implications for the Historical Biogeography of the Family
inferredcites →https://doi.org/10.1007/978-3-030-10837-3_13openalex-snapshot
Advances in Computational Methods for Phylogenetic Networks in the Presence of Hybridization
inferredcites →https://doi.org/10.1007/bf01821211openalex-snapshot
Geology and paleontology of late Cenozoic marine deposits in the Sacaco area (Peru)
inferredcites →https://doi.org/10.1007/s00227-009-1178-1openalex-snapshot
Phylogeography of California and Galápagos sea lions and population structure within the California sea lion
inferredcites →https://doi.org/10.1007/s10592-007-9473-1openalex-snapshot
Morphological and genetic evidence for two evolutionarily significant units (ESUs) in the South American fur seal, Arctocephalus gazella
inferredcites →https://doi.org/10.1016/0040-5809(83)90013-8openalex-snapshot
Properties of a neutral allele model with intragenic recombination
inferredcites →https://doi.org/10.1016/j.gene.2009.01.022openalex-snapshot
The monophyletic origin of sea lions and fur seals (Carnivora; Otariidae) in the Southern Hemisphere
inferredcites →https://doi.org/10.1016/j.palaeo.2012.06.007openalex-snapshot
History of upwelling in the Tropical Eastern Pacific and the paleogeography of the Isthmus of Panama
inferredcites →https://doi.org/10.1016/j.tree.2013.09.004openalex-snapshot
Computational approaches to species phylogeny inference and gene tree reconciliation
inferredcites →https://doi.org/10.1016/j.ympev.2006.05.022openalex-snapshot
Pinniped phylogeny and a new hypothesis for their origin and dispersal
inferredcites →https://doi.org/10.1017/cbo9781139095112openalex-snapshot
Bayesian Evolutionary Analysis with BEAST
inferredcites →https://doi.org/10.1017/s147720000300121xopenalex-snapshot
Fur seals and sea lions (Otariidae): Identification of species and taxonomic review
inferredcites →https://doi.org/10.1029/ar018p0001openalex-snapshot
Contributions to the systematics of the southern fur seals, with particular reference to the Juan Fernández and Guadalupe species
inferredcites →https://doi.org/10.1038/hdy.2009.25openalex-snapshot
Pinniped phylogenetic relationships inferred using AFLP markers
inferredcites →https://doi.org/10.1038/nature02053openalex-snapshot
Genome-scale approaches to resolving incongruence in molecular phylogenies
inferredcites →https://doi.org/10.1038/nature12003openalex-snapshot
Patterns and mechanisms of early Pliocene warmth
inferredcites →https://doi.org/10.1038/ng.3198openalex-snapshot
Convergent evolution of the genomes of marine mammals
inferredcites →https://doi.org/10.1038/nprot.2014.063openalex-snapshot
Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX
inferredcites →https://doi.org/10.1038/s41559-018-0717-xopenalex-snapshot
Whole-genome sequences of Malawi cichlids reveal multiple radiations interconnected by gene flow
inferredcites →https://doi.org/10.1038/s41559-020-1215-5openalex-snapshot
Determinants of genetic variation across eco-evolutionary scales in pinnipeds
inferredcites →https://doi.org/10.1038/s42003-018-0176-6openalex-snapshot
Incomplete lineage sorting rather than hybridization explains the inconsistent phylogeny of the wisent
inferredcites →https://doi.org/10.1073/pnas.022629899openalex-snapshot
Mutation rates in mammalian genomes
inferredcites →https://doi.org/10.1073/pnas.1200567109openalex-snapshot
Effect of ancient population structure on the degree of polymorphism shared between modern human populations and ancient hominins
inferredcites →https://doi.org/10.1080/0035919x.2011.564490openalex-snapshot
Review of fossil phocid and otariid seals from the southern and western coasts of South Africa
inferredcites →https://doi.org/10.1080/02724634.2011.550362openalex-snapshot
New records of the fur seal Callorhinus (Carnivora: Otariidae) from the Plio-Pleistocene Rio Dell Formation of Northern California and comments on otariid dental evolution
inferredcites →https://doi.org/10.1080/10635150500354928openalex-snapshot
Inferring Phylogeny Despite Incomplete Lineage Sorting
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/btp348openalex-snapshot
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
inferredcites →https://doi.org/10.1093/bioinformatics/btq033openalex-snapshot
BEDTools: a flexible suite of utilities for comparing genomic features
inferredcites →https://doi.org/10.1093/bioinformatics/btq062openalex-snapshot
Phybase: an R package for species tree analysis
inferredcites →https://doi.org/10.1093/bioinformatics/btq243openalex-snapshot
The Newick utilities: high-throughput phylogenetic tree processing in the U nix shell
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/bioinformatics/btx048openalex-snapshot
admixturegraph: an R package for admixture graph manipulation and fitting
inferredcites →https://doi.org/10.1093/bioinformatics/btz305openalex-snapshot
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
inferredcites →https://doi.org/10.1093/czoolo/61.5.854openalex-snapshot
The BPP program for species tree estimation and species delimitation
inferredcites →https://doi.org/10.1093/molbev/msm248openalex-snapshot
Strong Variations of Mitochondrial Mutation Rate across Mammals--the Longevity Hypothesis
inferredcites →https://doi.org/10.1093/molbev/msr048openalex-snapshot
Testing for Ancient Admixture between Closely Related Populations
inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
inferredcites →https://doi.org/10.1093/molbev/msx126openalex-snapshot
StarBEAST2 Brings Faster Species Tree Inference and Accurate Estimates of Substitution Rates
inferredcites →https://doi.org/10.1093/molbev/msx263openalex-snapshot
Improved Algorithmic Complexity for the 3SEQ Recombination Detection Algorithm
inferredcites →https://doi.org/10.1093/molbev/msx307openalex-snapshot
Bayesian Inference of Species Networks from Multilocus Sequence Data
inferredcites →https://doi.org/10.1093/molbev/msy147openalex-snapshot
Species Tree Inference with BPP Using Genomic Sequences and the Multispecies Coalescent
inferredcites →https://doi.org/10.1093/molbev/msz090openalex-snapshot
Additive Traits Lead to Feeding Advantage and Reproductive Isolation, Promoting Homoploid Hybrid Speciation
inferredcites →https://doi.org/10.1093/molbev/msz189openalex-snapshot
ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models
inferredcites →https://doi.org/10.1093/molbev/msz203openalex-snapshot
Polymorphism Data Assist Estimation of the Nonsynonymous over Synonymous Fixation Rate Ratio ω for Closely Related Species
inferredcites →https://doi.org/10.1093/sysbio/sys062openalex-snapshot
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
inferredcites →https://doi.org/10.1093/sysbio/syt049openalex-snapshot
The Influence of Gene Flow on Species Tree Estimation: A Simulation Study
inferredcites →https://doi.org/10.1093/sysbio/syt070openalex-snapshot
Introgression and Phenotypic Assimilation in Zimmerius Flycatchers (Tyrannidae): Population Genetic and Phylogenetic Inferences from Genome-Wide SNPs
inferredcites →https://doi.org/10.1093/sysbio/syx038openalex-snapshot
Phylogenomic Systematics of Ostariophysan Fishes: Ultraconserved Elements Support the Surprising Non-Monophyly of Characiformes
inferredcites →https://doi.org/10.1093/sysbio/syx041openalex-snapshot
Why Do Phylogenomic Data Sets Yield Conflicting Trees? Data Type Influences the Avian Tree of Life more than Taxon Sampling
inferredcites →https://doi.org/10.1093/sysbio/syx085openalex-snapshot
Coestimating Reticulate Phylogenies and Gene Trees from Multilocus Sequence Data
inferredcites →https://doi.org/10.1093/sysbio/syy015openalex-snapshot
Inferring Phylogenetic Networks Using PhyloNet
inferredcites →https://doi.org/10.1093/sysbio/syy040openalex-snapshot
Modeling Hybridization Under the Network Multispecies Coalescent
inferredcites →https://doi.org/10.1093/sysbio/syy041openalex-snapshot
Divergence Estimation in the Presence of Incomplete Lineage Sorting and Migration
inferredcites →https://doi.org/10.1101/gr.159426.113openalex-snapshot
Genome-wide evidence for speciation with gene flow in Heliconius butterflies
inferredcites →https://doi.org/10.1101/gr.186668.114openalex-snapshot
Phylogenomic evidence for ancient hybridization in the genomes of living cats (Felidae)
inferredcites →https://doi.org/10.1109/tcbb.2008.66openalex-snapshot
Incomplete Lineage Sorting: Consistent Phylogeny Estimation from Multiple Loci
inferredcites →https://doi.org/10.1111/1755-0998.12502openalex-snapshot
A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them
inferredcites →https://doi.org/10.1111/1755-0998.13265openalex-snapshot
Dsuite ‐ Fast D ‐statistics and related admixture evidence from VCF files
inferredcites →https://doi.org/10.1111/2041-210x.12700openalex-snapshot
Bioinformatic processing of RAD‐seq data dramatically impacts downstream population genetic inference
inferredcites →https://doi.org/10.1111/j.0014-3820.2002.tb01467.xopenalex-snapshot
MATHEMATICAL CONSEQUENCES OF THE GENEALOGICAL SPECIES CONCEPT
inferredcites →https://doi.org/10.1111/j.0014-3820.2003.tb00355.xopenalex-snapshot
THE SHAPES OF NEUTRAL GENE GENEALOGIES IN TWO SPECIES: PROBABILITIES OF MONOPHYLY, PARAPHYLY, AND POLYPHYLY IN A COALESCENT MODEL
inferredcites →https://doi.org/10.1111/j.1365-2907.2011.00193.xopenalex-snapshot
Pinniped taxonomy: review of currently recognized species and subspecies, and evidence used for their description
inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03041.xopenalex-snapshot
Ménage à trois on Macquarie Island: hybridization among three species of fur seal (Arctocephalusspp.) following historical population extinction
inferredcites →https://doi.org/10.1111/j.1469-7998.1897.tb00021.xopenalex-snapshot
4. On the Distrubution of Marine Mammals
inferredcites →https://doi.org/10.1111/j.1558-5646.1989.tb04220.xopenalex-snapshot
ANALYZING TABLES OF STATISTICAL TESTS
inferredcites →https://doi.org/10.1111/mec.12050openalex-snapshot
Next‐generation phylogenetics takes root
inferredcites →https://doi.org/10.1111/mec.12089openalex-snapshot
The effect of RAD allele dropout on the estimation of genetic variation within and between populations
inferredcites →https://doi.org/10.1111/mec.12258openalex-snapshot
The number of markers and samples needed for detecting bottlenecks under realistic scenarios, with and without recovery: a simulation‐based study
inferredcites →https://doi.org/10.1111/mec.12276openalex-snapshot
RAD seq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
inferredcites →https://doi.org/10.1111/mms.12098openalex-snapshot
Taxonomic status of two subspecies of South American fur seals: Arctocephalus australis australis vs. A. a. gracilis
inferredcites →https://doi.org/10.1111/zoj.12163openalex-snapshot
Colonization of the Southern Hemisphere by fur seals and sea lions (Carnivora: Otariidae) revealed by combined evidence phylogenetic and Bayesian biogeographical analysis
inferredcites →https://doi.org/10.1126/sciadv.1700299openalex-snapshot
Genome-wide signatures of complex introgression and adaptive evolution in the big cats
inferredcites →https://doi.org/10.1126/sciadv.aap9873openalex-snapshot
Whole-genome sequencing of the blue whale and other rorquals finds signatures for introgressive gene flow
inferredcites →https://doi.org/10.1126/science.290.5500.2288openalex-snapshot
Upwelling Intensification As Part of the Pliocene-Pleistocene Climate Transition
inferredcites →https://doi.org/10.1126/science.5.124.741openalex-snapshot
On the Distribution of Marine Mammals
inferredcites →https://doi.org/10.1126/science.aav6202openalex-snapshot
Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
inferredcites →https://doi.org/10.1126/science.aaw2090openalex-snapshot
Genomic architecture and introgression shape a butterfly radiation
inferredcites →https://doi.org/10.1146/annurev-earth-082517-010009openalex-snapshot
The Origin and Evolutionary Biology of Pinnipeds: Seals, Sea Lions, and Walruses
inferredcites →https://doi.org/10.1186/1471-2148-7-214openalex-snapshot
BEAST: Bayesian evolutionary analysis by sampling trees
inferredcites →https://doi.org/10.1186/1471-2148-7-216openalex-snapshot
Phylogeny and divergence of the pinnipeds (Carnivora: Mammalia) assessed using a multigene dataset
inferredcites →https://doi.org/10.1186/1471-2148-8-150openalex-snapshot
Tracing early stages of species differentiation: Ecological, morphological and genetic divergence of Galápagos sea lion populations
inferredcites →https://doi.org/10.1186/1741-7007-10-12openalex-snapshot
Updating the evolutionary history of Carnivora (Mammalia): a new species-level supertree complete with divergence time estimates
inferredcites →https://doi.org/10.1186/1742-9994-4-1openalex-snapshot
Evidence for recent gene flow between north-eastern and south-eastern Madagascan poison frogs from a phylogeography of the Mantella cowani group
inferredcites →https://doi.org/10.1186/s12859-014-0356-4openalex-snapshot
ANGSD: Analysis of Next Generation Sequencing Data
inferredcites →https://doi.org/10.1186/s12859-017-2002-4openalex-snapshot
Gene flow analysis method, the D-statistic, is robust in a wide parameter space
inferredcites →https://doi.org/10.1186/s12859-018-2129-yopenalex-snapshot
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
inferredcites →https://doi.org/10.1186/s13104-016-1900-2openalex-snapshot
AdapterRemoval v2: rapid adapter trimming, identification, and read merging
inferredcites →https://doi.org/10.1186/s13742-015-0047-8openalex-snapshot
Second-generation PLINK: rising to the challenge of larger and richer datasets
inferredcites →https://doi.org/10.13110/humanbiology.89.1.02openalex-snapshot
Admixture and Ancestry Inference from Ancient and Modern Samples through Measures of Population Genetic Drift
inferredcites →https://doi.org/10.1371/journal.pbio.1002224openalex-snapshot
The Dynamics of Incomplete Lineage Sorting across the Ancient Adaptive Radiation of Neoavian Birds
inferredcites →https://doi.org/10.1371/journal.pbio.1002379openalex-snapshot
Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation
inferredcites →https://doi.org/10.1371/journal.pcbi.1003537openalex-snapshot
BEAST 2: A Software Platform for Bayesian Evolutionary Analysis
inferredcites →https://doi.org/10.1371/journal.pgen.1002967openalex-snapshot
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
inferredcites →https://doi.org/10.1371/journal.pone.0065923openalex-snapshot
A Phylogenomic Perspective on the Radiation of Ray-Finned Fishes Based upon Targeted Sequencing of Ultraconserved Elements (UCEs)
inferredcites →https://doi.org/10.1534/g3.118.200171openalex-snapshot
RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding
inferredcites →https://doi.org/10.1534/genetics.112.145037openalex-snapshot
Ancient Admixture in Human History
inferredcites →https://doi.org/10.1534/genetics.115.183913openalex-snapshot
Admixture, Population Structure, and F -Statistics
inferredcites →https://doi.org/10.5281/zenodo.13499855openalex-snapshot
The otariid seals of the Pacific coast of America
inferredcites →https://doi.org/10.5281/zenodo.16492456openalex-snapshot
Callorhinus gilmorei n. sp., (Carnivora: Otariidae) from the San Diego Formation (Blancan) and its implications for otariid phylogeny
inferredcites →https://doi.org/10.5281/zenodo.3695532openalex-snapshot
Determinants of genetic variation across eco-evolutionary scales in pinnipeds
inferredcites →https://doi.org/10.7717/peerj.1660openalex-snapshot
AMAS: a fast tool for alignment manipulation and computing of summary statistics
inferredcites →https://doi.org/10.7717/peerj.6399openalex-snapshot
Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Phylogenomics of a genus of ‘Great Speciators’ reveals rampant incomplete lineage sorting, gene flow, and mitochondrial capture in island systems
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The challenging biogeography of the Juan Fernández Islands and Coast Range of central Chile explained by new models of East Pacific tectonics
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Introgression and incomplete lineage sorting blurred phylogenetic relationships across the genomes of sclerophyllous oaks from southwest China
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Evaluating hybrid speciation and swamping in wild carnivores with a decision‐tree approach
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Perspectives on the Grey Zone of Species Delimitation With Notes on Invertebrates in the Marine Environment
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