On the public citation graph

Selection for immune evasion in SARS-CoV-2 revealed by high-resolution epitope mapping combined with genome sequence analysis

0 signed · 71 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/anie.200801616openalex-snapshot
Combinatorial Synthesis of Peptide Arrays with a Laser Printer
inferredcites →https://doi.org/10.1016/bs.aivir.2018.01.001openalex-snapshot
Hosts and Sources of Endemic Human Coronaviruses
inferredcites →https://doi.org/10.1016/j.cell.2015.07.020openalex-snapshot
Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus
inferredcites →https://doi.org/10.1016/j.cell.2021.01.007openalex-snapshot
Adaptive immunity to SARS-CoV-2 and COVID-19
inferredcites →https://doi.org/10.1016/j.cell.2021.03.027openalex-snapshot
SARS-CoV-2 evolution in an immunocompromised host reveals shared neutralization escape mechanisms
inferredcites →https://doi.org/10.1016/j.cell.2021.09.003openalex-snapshot
The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages
inferredcites →https://doi.org/10.1016/j.chom.2020.03.002openalex-snapshot
A Sequence Homology and Bioinformatic Approach Can Predict Candidate Targets for Immune Responses to SARS-CoV-2
inferredcites →https://doi.org/10.1016/j.crmeth.2021.100014openalex-snapshot
Folding non-homologous proteins by coupling deep-learning contact maps with I-TASSER assembly simulations
inferredcites →https://doi.org/10.1016/j.ebiom.2021.103629openalex-snapshot
Host genetic factors determining COVID-19 susceptibility and severity
inferredcites →https://doi.org/10.1016/j.jim.2017.01.012openalex-snapshot
Single amino acid fingerprinting of the human antibody repertoire with high density peptide arrays
inferredcites →https://doi.org/10.1016/j.jmb.2020.04.009openalex-snapshot
Phylogenetic Analysis and Structural Modeling of SARS-CoV-2 Spike Protein Reveals an Evolutionary Distinct and Proteolytically Sensitive Activation Loop
inferredcites →https://doi.org/10.1021/acs.jproteome.0c00484openalex-snapshot
Rapid Response to Pandemic Threats: Immunogenic Epitope Detection of Pandemic Pathogens for Diagnostics and Vaccine Development Using Peptide Microarrays
inferredcites →https://doi.org/10.1038/nrmicro.2017.118openalex-snapshot
The evolution of seasonal influenza viruses
inferredcites →https://doi.org/10.1038/s41467-020-17488-8openalex-snapshot
SARS-CoV-2 proteome microarray for global profiling of COVID-19 specific IgG and IgM responses
inferredcites →https://doi.org/10.1038/s41467-021-22236-7openalex-snapshot
Systems serology detects functionally distinct coronavirus antibody features in children and elderly
inferredcites →https://doi.org/10.1038/s41541-020-0160-2openalex-snapshot
Immunization with full-length Plasmodium falciparum merozoite surface protein 1 is safe and elicits functional cytophilic antibodies in a randomized first-in-human trial
inferredcites →https://doi.org/10.1038/s41577-020-00460-4openalex-snapshot
Cross-reactive memory T cells and herd immunity to SARS-CoV-2
inferredcites →https://doi.org/10.1038/s41577-020-00480-0openalex-snapshot
Viral targets for vaccines against COVID-19
inferredcites →https://doi.org/10.1038/s41577-020-0362-xopenalex-snapshot
SARS-CoV-2 cross-reactivity in healthy donors
inferredcites →https://doi.org/10.1038/s41577-020-0389-zopenalex-snapshot
Pre-existing immunity to SARS-CoV-2: the knowns and unknowns
inferredcites →https://doi.org/10.1038/s41577-021-00544-9openalex-snapshot
Concerns about SARS-CoV-2 evolution should not hold back efforts to expand vaccination
inferredcites →https://doi.org/10.1038/s41577-021-00550-xopenalex-snapshot
Prospects for durable immune control of SARS-CoV-2 and prevention of reinfection
inferredcites →https://doi.org/10.1038/s41577-021-00662-4openalex-snapshot
SARS-CoV-2 breakthrough infections in vaccinated individuals: measurement, causes and impact
inferredcites →https://doi.org/10.1038/s41579-018-0118-9openalex-snapshot
Origin and evolution of pathogenic coronaviruses
inferredcites →https://doi.org/10.1038/s41579-021-00573-0openalex-snapshot
SARS-CoV-2 variants, spike mutations and immune escape
inferredcites →https://doi.org/10.1038/s41584-021-00608-zopenalex-snapshot
Systemic and organ-specific immune-related manifestations of COVID-19
inferredcites →https://doi.org/10.1038/s41586-020-2008-3openalex-snapshot
A new coronavirus associated with human respiratory disease in China
inferredcites →https://doi.org/10.1038/s41586-020-2286-9openalex-snapshot
A SARS-CoV-2 protein interaction map reveals targets for drug repurposing
inferredcites →https://doi.org/10.1038/s41586-021-03291-yopenalex-snapshot
SARS-CoV-2 evolution during treatment of chronic infection
inferredcites →https://doi.org/10.1038/s41586-021-04387-1openalex-snapshot
Omicron extensively but incompletely escapes Pfizer BNT162b2 neutralization
inferredcites →https://doi.org/10.1038/s41588-020-0697-zopenalex-snapshot
Exploring the coronavirus pandemic with the WashU Virus Genome Browser
inferredcites →https://doi.org/10.1038/s41590-020-0773-7openalex-snapshot
ORF8 and ORF3b antibodies are accurate serological markers of early and late SARS-CoV-2 infection
inferredcites →https://doi.org/10.1038/s42003-021-02852-1openalex-snapshot
Deep dissection of the antiviral immune profile of patients with COVID-19
inferredcites →https://doi.org/10.1073/pnas.1911203117openalex-snapshot
Frameshifting preserves key physicochemical properties of proteins
inferredcites →https://doi.org/10.1073/pnas.2109229118openalex-snapshot
Asymptomatic SARS-CoV-2 infection: A systematic review and meta-analysis
inferredcites →https://doi.org/10.1073/pnas.89.20.9489openalex-snapshot
Origins of genes: "big bang" or continuous creation?
inferredcites →https://doi.org/10.1080/22221751.2020.1719902openalex-snapshot
Genomic characterization of the 2019 novel human-pathogenic coronavirus isolated from a patient with atypical pneumonia after visiting Wuhan
inferredcites →https://doi.org/10.1093/bioinformatics/9.6.745openalex-snapshot
Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation
inferredcites →https://doi.org/10.1093/bioinformatics/btab856openalex-snapshot
CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants
inferredcites →https://doi.org/10.1093/bioinformatics/btg430openalex-snapshot
The Jalview Java alignment editor
inferredcites →https://doi.org/10.1093/molbev/msv003openalex-snapshot
The Relationship between dN/dS and Scaled Selection Coefficients
inferredcites →https://doi.org/10.1093/nar/gkh131openalex-snapshot
UniProt: the Universal Protein knowledgebase
inferredcites →https://doi.org/10.1093/nar/gkx346openalex-snapshot
BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes
inferredcites →https://doi.org/10.1093/ve/veaa010openalex-snapshot
Linking influenza virus evolution within and between human hosts
inferredcites →https://doi.org/10.1101/2020.08.18.256776openalex-snapshot
SARS-CoV-2 ORF9c Is a Membrane-Associated Protein that Suppresses Antiviral Responses in Cells
inferredcites →https://doi.org/10.1110/ps.062405906openalex-snapshot
Prediction of residues in discontinuous B‐cell epitopes using protein 3D structures
inferredcites →https://doi.org/10.1126/science.aaa0698openalex-snapshot
Comprehensive serological profiling of human populations using a synthetic human virome
inferredcites →https://doi.org/10.1126/science.abd4250openalex-snapshot
Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity
inferredcites →https://doi.org/10.1126/science.abf6648openalex-snapshot
Shared B cell memory to coronaviruses and other pathogens varies in human age groups and tissues
inferredcites →https://doi.org/10.1126/science.abg0821openalex-snapshot
SARS-CoV-2 within-host diversity and transmission
inferredcites →https://doi.org/10.1126/science.abg8663openalex-snapshot
Epidemiological and evolutionary considerations of SARS-CoV-2 vaccine dosing regimes
inferredcites →https://doi.org/10.1126/science.abi4727openalex-snapshot
Partial immunity and SARS-CoV-2 mutations
inferredcites →https://doi.org/10.1126/sciimmunol.abc8413openalex-snapshot
The receptor-binding domain of the viral spike protein is an immunodominant and highly specific target of antibodies in SARS-CoV-2 patients
inferredcites →https://doi.org/10.1126/sciimmunol.abe9950openalex-snapshot
Cross-reactive antibodies against human coronaviruses and the animal coronavirome suggest diagnostics for future zoonotic spillovers
inferredcites →https://doi.org/10.1126/scitranslmed.abh1803openalex-snapshot
Comment on “Genomic epidemiology of superspreading events in Austria reveals mutational dynamics and transmission properties of SARS-CoV-2”
inferredcites →https://doi.org/10.1128/cvi.00278-10openalex-snapshot
Prevalence of Antibodies to Four Human Coronaviruses Is Lower in Nasal Secretions than in Serum
inferredcites →https://doi.org/10.1128/mbio.02431-20openalex-snapshot
Accurate Diagnosis of COVID-19 by a Novel Immunogenic Secreted SARS-CoV-2 orf8 Protein
inferredcites →https://doi.org/10.1128/mbio.03647-20openalex-snapshot
Comorbidities in SARS-CoV-2 Patients: a Systematic Review and Meta-Analysis
inferredcites →https://doi.org/10.1146/annurev-micro-020518-115759openalex-snapshot
Human Coronavirus: Host-Pathogen Interaction
inferredcites →https://doi.org/10.1186/s13073-021-00847-5openalex-snapshot
Intra-host variation and evolutionary dynamics of SARS-CoV-2 populations in COVID-19 patients
inferredcites →https://doi.org/10.1186/s13643-021-01732-3openalex-snapshot
Effect modification of the association between comorbidities and severe course of COVID-19 disease by age of study participants: a systematic review and meta-analysis
inferredcites →https://doi.org/10.12688/f1000research.7931.1openalex-snapshot
FreeSASA: An open source C library for solvent accessible surface area calculations
inferredcites →https://doi.org/10.1371/journal.ppat.1009849openalex-snapshot
Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks
inferredcites →https://doi.org/10.1890/08-1823.1openalex-snapshot
Associations between species and groups of sites: indices and statistical inference
inferredcites →https://doi.org/10.2807/1560-7917.es.2021.26.24.2100509openalex-snapshot
Increased transmissibility and global spread of SARS-CoV-2 variants of concern as at June 2021
inferredcites →https://doi.org/10.3389/fimmu.2020.610688openalex-snapshot
Humoral Responses and Serological Assays in SARS-CoV-2 Infections
inferredcites →https://doi.org/10.3389/fimmu.2021.708264openalex-snapshot
SARS-CoV-2 Accessory Proteins in Viral Pathogenesis: Knowns and Unknowns
inferredcites →https://doi.org/10.3390/genes12060809openalex-snapshot
Origin, Evolution and Stability of Overlapping Genes in Viruses: A Systematic Review
inferredcites →https://doi.org/10.4049/jimmunol.2100421openalex-snapshot
Cutting Edge: Nucleocapsid Vaccine Elicits Spike-Independent SARS-CoV-2 Protective Immunity
inferredcites →https://doi.org/10.7554/elife.59633openalex-snapshot
Dynamically evolving novel overlapping gene as a factor in the SARS-CoV-2 pandemic

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2147/idr.s438915openalex-snapshot
Emergence of SARS-CoV-2 with Dual-Drug Resistant Mutations During a Long-Term Infection in a Kidney Transplant Recipient
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.