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Allele mining of eukaryotic translation initiation factor genes in Prunus species for the identification of new sources of resistance to sharka

https://doi.org/10.1101/2023.01.08.523144
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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00122-002-0936-yopenalex-snapshot
Genetic linkage maps of two apricot cultivars (Prunus armeniaca L.), and mapping of PPV (sharka) resistance
inferredcites →https://doi.org/10.1007/s00122-003-1243-yopenalex-snapshot
An apricot (Prunus armeniaca L.) F2 progeny linkage map based on SSR and AFLP markers, mapping plum pox virus resistance and self-incompatibility traits
inferredcites →https://doi.org/10.1007/s00438-004-1099-0openalex-snapshot
Analogues of virus resistance genes map to QTLs for resistance to sharka disease in Prunus davidiana
inferredcites →https://doi.org/10.1007/s10658-009-9468-5openalex-snapshot
Genetic resistance for the sustainable control of plant virus diseases: breeding, mechanisms and durability
inferredcites →https://doi.org/10.1007/s11032-011-9550-5openalex-snapshot
A survey of natural and ethyl methane sulfonate-induced variations of eIF4E using high-resolution melting analysis in Capsicum
inferredcites →https://doi.org/10.1007/s11295-014-0750-0openalex-snapshot
Selecting with markers linked to the PPVres major QTL is not sufficient to predict resistance to Plum Pox Virus (PPV) in apricot
inferredcites →https://doi.org/10.1016/j.febslet.2007.02.007openalex-snapshot
Coordinated and selective recruitment of eIF4E and eIF4G factors for potyvirus infection in Arabidopsis thaliana
inferredcites →https://doi.org/10.1016/j.foodchem.2016.09.031openalex-snapshot
Natural variation in folate levels among tomato (Solanum lycopersicum) accessions
inferredcites →https://doi.org/10.1016/j.tplants.2005.11.004openalex-snapshot
Translation initiation factors: a weak link in plant RNA virus infection
inferredcites →https://doi.org/10.1016/s0065-3527(09)07504-6openalex-snapshot
Recessive Resistance to Plant Viruses
inferredcites →https://doi.org/10.1038/ng.2586openalex-snapshot
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
inferredcites →https://doi.org/10.1038/s41438-020-0281-9openalex-snapshot
Whole genome re-sequencing of sweet cherry (Prunus avium L.) yields insights into genomic diversity of a fruit species
inferredcites →https://doi.org/10.1038/s41438-020-0284-6openalex-snapshot
Genetic diversity, population structure, and relationships of apricot (Prunus) based on restriction site-associated DNA sequencing
inferredcites →https://doi.org/10.1038/s41467-020-19669-xopenalex-snapshot
Inferring the molecular and phenotypic impact of amino acid variants with MutPred2
inferredcites →https://doi.org/10.1038/s41467-021-24283-6openalex-snapshot
Population genomics of apricots unravels domestication history and adaptive events
inferredcites →https://doi.org/10.1038/srep29250openalex-snapshot
EcoTILLING revealed SNPs in GhSus genes that are associated with fiber- and seed-related traits in upland cotton
inferredcites →https://doi.org/10.1043/0363-6445-26.4.797openalex-snapshot
Phylogeny and Systematics of Prunus (Rosaceae) as Determined by Sequence Analysis of ITS and the Chloroplast trnL-trnF Spacer DNA
inferredcites →https://doi.org/10.1046/j.1439-0523.2000.00458.xopenalex-snapshot
Inheritance of resistance to plum pox potyvirus (PPV) in apricot, Prunus armeniaca
inferredcites →https://doi.org/10.1046/j.1439-0523.2003.00872.xopenalex-snapshot
Resistance of almond cultivars to Plum pox virus (sharka)
inferredcites →https://doi.org/10.1046/j.1462-2920.2002.00362.xopenalex-snapshot
A fluorimetric method for the estimation of G + C mol% content in microorganisms by thermal denaturation temperature
inferredcites →https://doi.org/10.1073/pnas.1311134110openalex-snapshot
Stepwise artificial evolution of a plant disease resistance gene
inferredcites →https://doi.org/10.1093/bioinformatics/btp187openalex-snapshot
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
inferredcites →https://doi.org/10.1093/molbev/msx335openalex-snapshot
Datamonkey 2.0: A Modern Web Application for Characterizing Selective and Other Evolutionary Processes
inferredcites →https://doi.org/10.1094/mpmi-19-0541openalex-snapshot
Multiple Resistance Traits ControlPlum pox virusInfection inArabidopsis thaliana
inferredcites →https://doi.org/10.1104/pp.102.017855openalex-snapshot
The Eukaryotic Translation Initiation Factor 4E Controls Lettuce Susceptibility to the PotyvirusLettuce mosaic virus
inferredcites →https://doi.org/10.1111/j.1364-3703.2009.00535.xopenalex-snapshot
Quantitative trait loci meta‐analysis of Plum pox virus resistance in apricot ( Prunus armeniaca L.): new insights on the organization and the identification of genomic resistance factors
inferredcites →https://doi.org/10.1111/j.1364-3703.2012.00785.xopenalex-snapshot
Melon RNA interference (RNAi) lines silenced for Cm‐eIF4E show broad virus resistance
inferredcites →https://doi.org/10.1111/j.1364-3703.2012.00791.xopenalex-snapshot
Eukaryotic translation initiation factor 4E‐mediated recessive resistance to plant viruses and its utility in crop improvement
inferredcites →https://doi.org/10.1111/j.1365-2338.1994.tb01090.xopenalex-snapshot
Amélioration de l'abricotier pour la résistance à la sharka1
inferredcites →https://doi.org/10.1111/j.1365-2338.2006.01027.xopenalex-snapshot
Plum pox virus and the estimated costs associated with sharka disease
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05201.xopenalex-snapshot
An exceptionally high nucleotide and haplotype diversity and a signature of positive selection for the eIF4E resistance gene in barley are revealed by allele mining and phylogenetic analyses of natural populations
inferredcites →https://doi.org/10.1111/j.1365-313x.2008.03407.xopenalex-snapshot
Natural variation and functional analyses provide evidence for co‐evolution between plant eIF4E and potyviral VPg
inferredcites →https://doi.org/10.1111/j.1755-0998.2010.02847.xopenalex-snapshot
Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
inferredcites →https://doi.org/10.1111/mec.13772openalex-snapshot
New insights into the history of domesticated and wild apricots and its contribution to Plum pox virus resistance
inferredcites →https://doi.org/10.1111/mpp.12037openalex-snapshot
Genomic analysis reveals MATH gene(s) as candidate(s) for P lum pox virus ( PPV ) resistance in apricot ( P runus armeniaca L .)
inferredcites →https://doi.org/10.1111/nph.13627openalex-snapshot
Genome‐wide association links candidate genes to resistance to Plum Pox Virus in apricot ( Prunus armeniaca )
inferredcites →https://doi.org/10.1111/pbi.13112openalex-snapshot
Comparative population genomics identified genomic regions and candidate genes associated with fruit domestication traits in peach
inferredcites →https://doi.org/10.1111/tpj.13136openalex-snapshot
A TILLING approach to generate broad‐spectrum resistance to potyviruses in tomato is hampered by eIF4E gene redundancy
inferredcites →https://doi.org/10.1146/annurev-phyto-080614-120140openalex-snapshot
Sharka Epidemiology and Worldwide Management Strategies: Learning Lessons to Optimize Disease Control in Perennial Plants
inferredcites →https://doi.org/10.1146/annurev.py.28.090190.001143openalex-snapshot
The Genetics of Resistance to Plant Viruses
inferredcites →https://doi.org/10.1186/1471-2164-11-631openalex-snapshot
EcoTILLING in Capsicum species: searching for new virus resistances
inferredcites →https://doi.org/10.1186/1471-2164-14-s3-s2openalex-snapshot
Collective judgment predicts disease-associated single nucleotide variants
inferredcites →https://doi.org/10.1186/1471-2229-7-34openalex-snapshot
EcoTILLING for the identification of allelic variants of melon eIF4E, a factor that controls virus susceptibility
inferredcites →https://doi.org/10.1186/s12864-017-3606-9openalex-snapshot
The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
inferredcites →https://doi.org/10.1186/s12870-014-0209-3openalex-snapshot
Haplotype diversity of VvTFL1A gene and association with cluster traits ingrapevine (V. vinifera)
inferredcites →https://doi.org/10.1186/s12870-016-0968-0openalex-snapshot
EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
inferredcites →https://doi.org/10.1186/s12870-017-1101-8openalex-snapshot
Diversity, distribution of Puroindoline genes and their effect on kernel hardness in a diverse panel of Chinese wheat germplasm
inferredcites →https://doi.org/10.1186/s12870-018-1237-1openalex-snapshot
Resistance to Plum Pox Virus (PPV) in apricot (Prunus armeniaca L.) is associated with down-regulation of two MATHd genes
inferredcites →https://doi.org/10.1186/s12870-019-2047-9openalex-snapshot
Silencing of one copy of the translation initiation factor eIFiso4G in Japanese plum (Prunus salicina) impacts susceptibility to Plum pox virus (PPV) and small RNA production
inferredcites →https://doi.org/10.1186/s13059-019-1648-9openalex-snapshot
Genomic analyses of an extensive collection of wild and cultivated accessions provide new insights into peach breeding history
inferredcites →https://doi.org/10.1371/journal.pcbi.1003440openalex-snapshot
PredictSNP: Robust and Accurate Consensus Classifier for Prediction of Disease-Related Mutations
inferredcites →https://doi.org/10.1371/journal.pgen.1006214openalex-snapshot
Human Management of a Wild Plant Modulates the Evolutionary Dynamics of a Gene Determining Recessive Resistance to Virus Infection
inferredcites →https://doi.org/10.1371/journal.pone.0050627openalex-snapshot
Silencing of the Host Factor eIF(iso)4E Gene Confers Plum Pox Virus Resistance in Plum
inferredcites →https://doi.org/10.1371/journal.pone.0055954openalex-snapshot
Interfamily Transfer of Dual NB-LRR Genes Confers Resistance to Multiple Pathogens
inferredcites →https://doi.org/10.1385/1-59259-413-1:205openalex-snapshot
High-Throughput TILLING for Functional Genomics
inferredcites →https://doi.org/10.1534/g3.116.032672openalex-snapshot
Evolutionary Genomics of Peach and Almond Domestication
inferredcites →https://doi.org/10.17660/actahortic.1998.465.21openalex-snapshot
EVALUATION OF THE INTERSPECIFIC PROGENY PRUNUS PERSICA CV SUMMERGRAND X PRUNUS DAVIDIANA FOR DISEASE RESISTANCE AND SOME AGRONOMIC FEATURES
inferredcites →https://doi.org/10.17660/actahortic.1998.465.86openalex-snapshot
GENETIC RESISTANCE TO PLUM POX POTYVIRUS IN PEACHES
inferredcites →https://doi.org/10.17660/actahortic.2002.592.98openalex-snapshot
PRELIMINARY OBSERVATIONS ON THE RESISTANCE TO SHARKA IN PEACH AND RELATED SPECIES
inferredcites →https://doi.org/10.2174/138920208784533656openalex-snapshot
Application of TILLING and EcoTILLING as Reverse Genetic Approaches to Elucidate the Function of Genes in Plants and Animals
inferredcites →https://doi.org/10.3389/fpls.2019.01576openalex-snapshot
Resistance to Sharka in Apricot: Comparison of Phase-Reconstructed Resistant and Susceptible Haplotypes of ‘Lito’ Chromosome 1 and Analysis of Candidate Genes
inferredcites →https://doi.org/10.3390/genes10040307openalex-snapshot
EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight
inferredcites →https://doi.org/10.3390/v10090484openalex-snapshot
Susceptibility Genes to Plant Viruses

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inferred← citeshttps://doi.org/10.54103/milanoup.155openalex-snapshot
most important fruit crops in Mediterranean Basin (Mb)
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