On the public citation graph

Conserved molecular recognition by an intrinsically disordered region in the absence of sequence conservation

https://doi.org/10.1101/2023.08.06.552128
0 signed · 94 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/jmbi.1999.3110openalex-snapshot
Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm
inferredcites →https://doi.org/10.1006/jmbi.1999.3208openalex-snapshot
Effective use of sequence correlation and conservation in fold recognition 1 1Edited by J. M. Thornton
inferredcites →https://doi.org/10.1007/978-1-4939-2438-7_1openalex-snapshot
Coronaviruses: An Overview of Their Replication and Pathogenesis
inferredcites →https://doi.org/10.1016/j.antiviral.2013.12.009openalex-snapshot
The SARS coronavirus nucleocapsid protein – Forms and functions
inferredcites →https://doi.org/10.1016/j.bpj.2013.07.020openalex-snapshot
Accurate SAXS Profile Computation and its Assessment by Contrast Variation Experiments
inferredcites →https://doi.org/10.1016/j.bpj.2015.08.015openalex-snapshot
MDTraj: A Modern Open Library for the Analysis of Molecular Dynamics Trajectories
inferredcites →https://doi.org/10.1016/j.cell.2016.09.010openalex-snapshot
Structured States of Disordered Proteins from Genomic Sequences
inferredcites →https://doi.org/10.1016/j.cpc.2021.108171openalex-snapshot
LAMMPS - a flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales
inferredcites →https://doi.org/10.1016/j.crstbi.2021.08.002openalex-snapshot
Folded domain charge properties influence the conformational behavior of disordered tails
inferredcites →https://doi.org/10.1016/j.gde.2022.101964openalex-snapshot
Evolution of short linear motifs and disordered proteins Topic: yeast as model system to study evolution
inferredcites →https://doi.org/10.1016/j.jmb.2021.167373openalex-snapshot
Uncovering Non-random Binary Patterns Within Sequences of Intrinsically Disordered Proteins
inferredcites →https://doi.org/10.1016/j.jmb.2022.167860openalex-snapshot
Vital for Viruses: Intrinsically Disordered Proteins
inferredcites →https://doi.org/10.1016/j.jmb.2023.167988openalex-snapshot
Condensation Goes Viral: A Polymer Physics Perspective
inferredcites →https://doi.org/10.1016/j.molcel.2020.11.025openalex-snapshot
Phosphoregulation of Phase Separation by the SARS-CoV-2 N Protein Suggests a Biophysical Basis for its Dual Functions
inferredcites →https://doi.org/10.1016/j.sbi.2011.02.005openalex-snapshot
Evolution and disorder
inferredcites →https://doi.org/10.1016/j.sbi.2015.03.008openalex-snapshot
Relating sequence encoded information to form and function of intrinsically disordered proteins
inferredcites →https://doi.org/10.1016/j.str.2013.08.001openalex-snapshot
From Sequence and Forces to Structure, Function, and Evolution of Intrinsically Disordered Proteins
inferredcites →https://doi.org/10.1016/j.virol.2015.02.039openalex-snapshot
Origins and evolution of viruses of eukaryotes: The ultimate modularity
inferredcites →https://doi.org/10.1016/j.virol.2019.08.031openalex-snapshot
Coronavirus genomic RNA packaging
inferredcites →https://doi.org/10.1016/j.virol.2021.01.003openalex-snapshot
Development of a SARS-CoV-2 nucleocapsid specific monoclonal antibody
inferredcites →https://doi.org/10.1016/s0022-2836(05)80134-2openalex-snapshot
SCOP: A structural classification of proteins database for the investigation of sequences and structures
inferredcites →https://doi.org/10.1016/s0065-3527(06)66005-3openalex-snapshot
The Molecular Biology of Coronaviruses
inferredcites →https://doi.org/10.1016/s0966-842x(00)01863-1openalex-snapshot
The origins and ongoing evolution of viruses
inferredcites →https://doi.org/10.1016/s1093-3263(00)00138-8openalex-snapshot
Intrinsically disordered protein
inferredcites →https://doi.org/10.1021/acs.biochem.1c00465openalex-snapshot
Clustering of Aromatic Residues in Prion-like Domains Can Tune the Formation, State, and Organization of Biomolecular Condensates
inferredcites →https://doi.org/10.1021/acs.jctc.3c00190openalex-snapshot
SOURSOP: A Python Package for the Analysis of Simulations of Intrinsically Disordered Proteins
inferredcites →https://doi.org/10.1021/acs.jpclett.0c02822openalex-snapshot
Revealing the Hidden Sensitivity of Intrinsically Disordered Proteins to their Chemical Environment
inferredcites →https://doi.org/10.1021/cr400525mopenalex-snapshot
Classification of Intrinsically Disordered Regions and Proteins
inferredcites →https://doi.org/10.1038/nchembio.1668openalex-snapshot
Disorder and residual helicity alter p53-Mdm2 binding affinity and signaling in cells
inferredcites →https://doi.org/10.1038/ng.3050openalex-snapshot
A framework for the interpretation of de novo mutation in human disease
inferredcites →https://doi.org/10.1038/nmeth0410-248openalex-snapshot
A method and server for predicting damaging missense mutations
inferredcites →https://doi.org/10.1038/s41467-021-21953-3openalex-snapshot
The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA
inferredcites →https://doi.org/10.1038/s41467-023-38015-5openalex-snapshot
Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
inferredcites →https://doi.org/10.1038/s41467-024-47761-zopenalex-snapshot
Disordered clock protein interactions and charge blocks turn an hourglass into a persistent circadian oscillator
inferredcites →https://doi.org/10.1038/s41557-021-00840-wopenalex-snapshot
Deciphering how naturally occurring sequence features impact the phase behaviours of disordered prion-like domains
inferredcites →https://doi.org/10.1038/s41579-018-0118-9openalex-snapshot
Origin and evolution of pathogenic coronaviruses
inferredcites →https://doi.org/10.1038/s41586-021-03819-2openalex-snapshot
Highly accurate protein structure prediction with AlphaFold
inferredcites →https://doi.org/10.1038/s41586-021-03828-1openalex-snapshot
Highly accurate protein structure prediction for the human proteome
inferredcites →https://doi.org/10.1038/s41592-019-0686-2openalex-snapshot
SciPy 1.0: fundamental algorithms for scientific computing in Python
inferredcites →https://doi.org/10.1038/s41592-022-01488-1openalex-snapshot
ColabFold: making protein folding accessible to all
inferredcites →https://doi.org/10.1038/s41592-023-02159-5openalex-snapshot
Direct prediction of intrinsically disordered protein conformational properties from sequence
inferredcites →https://doi.org/10.1038/s41594-022-00811-wopenalex-snapshot
Conformational buffering underlies functional selection in intrinsically disordered protein regions
inferredcites →https://doi.org/10.1038/s43588-021-00155-3openalex-snapshot
Physics-driven coarse-grained model for biomolecular phase separation with near-quantitative accuracy
inferredcites →https://doi.org/10.1039/c1mb05231dopenalex-snapshot
Attributes of short linear motifs
inferredcites →https://doi.org/10.1042/bj20121346openalex-snapshot
Describing sequence–ensemble relationships for intrinsically disordered proteins
inferredcites →https://doi.org/10.1063/1.4929391openalex-snapshot
A theoretical method to compute sequence dependent configurational properties in charged polymers and proteins
inferredcites →https://doi.org/10.1073/pnas.1119057109openalex-snapshot
Ionic strength-dependent persistence lengths of single-stranded RNA and DNA
inferredcites →https://doi.org/10.1073/pnas.1304749110openalex-snapshot
Conformations of intrinsically disordered proteins are influenced by linear sequence distributions of oppositely charged residues
inferredcites →https://doi.org/10.1073/pnas.1614787114openalex-snapshot
Selection maintains signaling function of a highly diverged intrinsically disordered region
inferredcites →https://doi.org/10.1073/pnas.1904813116openalex-snapshot
Effective concentrations enforced by intrinsically disordered linkers are governed by polymer physics
inferredcites →https://doi.org/10.1073/pnas.2008176117openalex-snapshot
Genomic determinants of pathogenicity in SARS-CoV-2 and other human coronaviruses
inferredcites →https://doi.org/10.1073/pnas.2106690118openalex-snapshot
Diffusion of a disordered protein on its folded ligand
inferredcites →https://doi.org/10.1073/pnas.2111696118openalex-snapshot
Accurate model of liquid–liquid phase behavior of intrinsically disordered proteins from optimization of single-chain properties
inferredcites →https://doi.org/10.1073/pnas.2215371120openalex-snapshot
Apolipoprotein E4 has extensive conformational heterogeneity in lipid-free and lipid-bound forms
inferredcites →https://doi.org/10.1080/07391102.2012.675145openalex-snapshot
Orderly order in protein intrinsic disorder distribution: disorder in 3500 proteomes from viruses and the three domains of life
inferredcites →https://doi.org/10.1093/bioinformatics/btaa009openalex-snapshot
The Protein Imager: a full-featured online molecular viewer interface with server-side HQ-rendering capabilities
inferredcites →https://doi.org/10.1093/nar/27.1.275openalex-snapshot
The CATH Database provides insights into protein structure/function relationships
inferredcites →https://doi.org/10.1093/nar/gkab975openalex-snapshot
The Eukaryotic Linear Motif resource: 2022 release
inferredcites →https://doi.org/10.1093/nar/gkad1215openalex-snapshot
The disordered N-terminal tail of SARS-CoV-2 Nucleocapsid protein forms a dynamic complex with RNA
inferredcites →https://doi.org/10.1093/nar/gkr367openalex-snapshot
HMMER web server: interactive sequence similarity searching
inferredcites →https://doi.org/10.1093/nar/gkt1223openalex-snapshot
Pfam: the protein families database
inferredcites →https://doi.org/10.1093/nar/gnh003openalex-snapshot
Impedance-based detection of DNA sequences using a silicon transducer with PNA as the probe layer
inferredcites →https://doi.org/10.1096/fasebj.10.8.8666162openalex-snapshot
Basic concepts in RNA virus evolution
inferredcites →https://doi.org/10.1101/2022.02.10.480018openalex-snapshot
Sequence- and chemical specificity define the functional landscape of intrinsically disordered regions
inferredcites →https://doi.org/10.1101/2023.03.09.531820openalex-snapshot
Aberrant Phase Separation is a Common Killing Strategy of Positively Charged Peptides in Biology and Human Disease
inferredcites →https://doi.org/10.1110/ps.4210102openalex-snapshot
Natively unfolded proteins: A point where biology waits for physics
inferredcites →https://doi.org/10.1126/science.aan5774openalex-snapshot
Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water
inferredcites →https://doi.org/10.1126/science.aaw8653openalex-snapshot
Valence and patterning of aromatic residues determine the phase behavior of prion-like domains
inferredcites →https://doi.org/10.1126/science.abm4805openalex-snapshot
Computed structures of core eukaryotic protein complexes
inferredcites →https://doi.org/10.1146/annurev.bi.62.070193.001035openalex-snapshot
STRUCTURAL AND GENETIC ANALYSIS OF PROTEIN STABILITY
inferredcites →https://doi.org/10.1186/s12859-020-3475-0openalex-snapshot
PACVr: plastome assembly coverage visualization in R
inferredcites →https://doi.org/10.1371/journal.pcbi.1000146openalex-snapshot
Classifying RNA-Binding Proteins Based on Electrostatic Properties
inferredcites →https://doi.org/10.1371/journal.pcbi.1010238openalex-snapshot
Discovering molecular features of intrinsically disordered regions by using evolution for contrastive learning
inferredcites →https://doi.org/10.1371/journal.pgen.1009629openalex-snapshot
A functionally divergent intrinsically disordered region underlying the conservation of stochastic signaling
inferredcites →https://doi.org/10.15252/embj.2020105938openalex-snapshot
Structures of the SARS‐CoV‐2 nucleocapsid and their perspectives for drug design
inferredcites →https://doi.org/10.3390/biom12070929openalex-snapshot
NMR Reveals Specific Tracts within the Intrinsically Disordered Regions of the SARS-CoV-2 Nucleocapsid Protein Involved in RNA Encountering
inferredcites →https://doi.org/10.3390/v6082991openalex-snapshot
The Coronavirus Nucleocapsid Is a Multifunctional Protein
inferredcites →https://doi.org/10.7554/elife.46883openalex-snapshot
Proteome-wide signatures of function in highly diverged intrinsically disordered regions
inferredcites →https://doi.org/10.7554/elife.60220openalex-snapshot
Identifying molecular features that are associated with biological function of intrinsically disordered protein regions
inferredcites →https://doi.org/10.7554/elife.70344openalex-snapshot
SWI/SNF senses carbon starvation with a pH-sensitive low-complexity sequence

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.sbi.2024.102980openalex-snapshot
Protein binding and folding through an evolutionary lens
inferred← citeshttps://doi.org/10.1038/s41467-024-47761-zopenalex-snapshot
Disordered clock protein interactions and charge blocks turn an hourglass into a persistent circadian oscillator
inferred← citeshttps://doi.org/10.1038/s41556-025-01867-8openalex-snapshot
Sequence and chemical specificity define the functional landscape of intrinsically disordered regions
inferred← citeshttps://doi.org/10.1038/s41580-023-00673-0openalex-snapshot
The molecular basis for cellular function of intrinsically disordered protein regions
inferred← citeshttps://doi.org/10.1038/s43588-025-00881-yopenalex-snapshot
Generalized design of sequence–ensemble–function relationships for intrinsically disordered proteins
inferred← citeshttps://doi.org/10.1073/pnas.2409139121openalex-snapshot
Molecular insights into the interaction between a disordered protein and a folded RNA
inferred← citeshttps://doi.org/10.1073/pnas.2604562123openalex-snapshot
A functional map of the human intrinsically disordered proteome
inferred← citeshttps://doi.org/10.1101/2022.02.10.480018openalex-snapshot
Sequence- and chemical specificity define the functional landscape of intrinsically disordered regions
inferred← citeshttps://doi.org/10.1101/2024.06.03.597104openalex-snapshot
Direct prediction of intermolecular interactions driven by disordered regions
inferred← citeshttps://doi.org/10.3390/biomimetics11090680openalex-snapshot
Embrace Disorder as a Function: Bio-Informed Biomaterials Design Advanced by Intrinsically Disordered Proteins
inferred← citeshttps://doi.org/10.7554/elife.108922openalex-snapshot
Evolution of a fuzzy ribonucleoprotein complex in viral assembly
inferred← citeshttps://doi.org/10.7554/elife.108922.1openalex-snapshot
Evolution of a fuzzy ribonucleoprotein complex in viral assembly
inferred← citeshttps://doi.org/10.7554/elife.108922.2openalex-snapshot
Evolution of a fuzzy ribonucleoprotein complex in viral assembly
inferred← citeshttps://doi.org/10.7554/elife.108922.3openalex-snapshot
Evolution of a fuzzy ribonucleoprotein complex in viral assembly
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.