On the public citation graph

Host microbiome determines host specificity of the human whipworm, Trichuris trichiura

https://doi.org/10.1101/2025.05.09.653168

0 signed · 68 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/eji.1830241230openalex-snapshot

Low‐level infection with Trichuris muris significantly affects the polarization of the CD4 response

inferredcites →https://doi.org/10.1007/bf00925723openalex-snapshot

The early phase of tissue invasion byTrichuris muris (Nematoda: Trichuroidea)

inferredcites →https://doi.org/10.1007/s00436-013-3300-zopenalex-snapshot

Evidence for bacteria-independent hatching of Trichuris muris eggs

inferredcites →https://doi.org/10.1007/s00436-015-4476-1openalex-snapshot

In vitro hatching of Trichuris suis eggs

inferredcites →https://doi.org/10.1016/0020-7519(80)90006-5openalex-snapshot

The location of parasites within their hosts: Site selection by Trichuris muris in the laboratory mouse

inferredcites →https://doi.org/10.1016/bs.apar.2023.05.002openalex-snapshot

Another decade of research: An update and application of key discoveries

inferredcites →https://doi.org/10.1016/j.celrep.2022.111725openalex-snapshot

Clostridia isolated from helminth-colonized humans promote the life cycle of Trichuris species

inferredcites →https://doi.org/10.1016/j.chom.2022.03.015openalex-snapshot

Microbial byproducts determine reproductive fitness of free-living and parasitic nematodes

inferredcites →https://doi.org/10.1016/j.humic.2019.100068openalex-snapshot

From anaerobes to aerointolerant prokaryotes

inferredcites →https://doi.org/10.1016/j.ijpara.2020.06.001openalex-snapshot

Development of caecaloids to study host–pathogen interactions: new insights into immunoregulatory functions of Trichuris muris extracellular vesicles in the caecum

inferredcites →https://doi.org/10.1016/j.ijpddr.2023.10.001openalex-snapshot

Trichuris muris egg-hatching assay for anthelminthic drug discovery and characterization

inferredcites →https://doi.org/10.1016/j.ijpp.2021.03.001openalex-snapshot

Gastrointestinal infection in Italy during the Roman Imperial and Longobard periods: A paleoparasitological analysis of sediment from skeletal remains and sewer drains

inferredcites →https://doi.org/10.1016/j.jcmgh.2019.07.006openalex-snapshot

The Structure and Function of the Human Small Intestinal Microbiota: Current Understanding and Future Directions

inferredcites →https://doi.org/10.1016/j.jiph.2024.03.005openalex-snapshot

The global prevalence of Trichuris trichiura infection in humans (2010-2023): A systematic review and meta-analysis

inferredcites →https://doi.org/10.1016/j.parint.2019.01.010openalex-snapshot

An advanced protocol for the purification of whipworm eggs from feces for use as therapeutic agents

inferredcites →https://doi.org/10.1016/j.pt.2007.11.007openalex-snapshot

Parasites as probes for prehistoric human migrations?

inferredcites →https://doi.org/10.1016/j.pt.2021.08.008openalex-snapshot

Hatching of parasitic nematode eggs: a crucial step determining infection

inferredcites →https://doi.org/10.1016/j.vprsr.2017.11.004openalex-snapshot

Molecular species identification of Trichuris trichiura in African green monkey on St. Kitts, West Indies

inferredcites →https://doi.org/10.1016/s0020-7519(01)00281-8openalex-snapshot

The effect of challenge and trickle Trichuris muris infections on the polarisation of the immune response

inferredcites →https://doi.org/10.1016/s0034-5288(18)33478-7openalex-snapshot

The relationship between Trichuris trichiura (Linnaeus 1758) of man and Trichuris suis (Schrank 1788) of the pig

inferredcites →https://doi.org/10.1016/s0140-6736(17)31930-xopenalex-snapshot

Soil-transmitted helminth infections

inferredcites →https://doi.org/10.1017/s0031182000072395openalex-snapshot

Acquired immunity toTrichuris murisin the albino laboratory mouse

inferredcites →https://doi.org/10.1017/s0031182020001298openalex-snapshot

A comparative study of parasites in three latrines from Medieval and Renaissance Brussels, Belgium (14th–17th centuries)

inferredcites →https://doi.org/10.1017/s0031182021000834openalex-snapshot

The interplay between Trichuris and the microbiota

inferredcites →https://doi.org/10.1038/nature17645openalex-snapshot

Culturing of ‘unculturable’ human microbiota reveals novel taxa and extensive sporulation

inferredcites →https://doi.org/10.1038/ncomms9292openalex-snapshot

The outer mucus layer hosts a distinct intestinal microbial niche

inferredcites →https://doi.org/10.1038/s41467-022-29334-0openalex-snapshot

Defining the early stages of intestinal colonisation by whipworms

inferredcites →https://doi.org/10.1038/s41467-022-31487-xopenalex-snapshot

Population genomics of ancient and modern Trichuris trichiura

inferredcites →https://doi.org/10.1038/s41572-020-0171-3openalex-snapshot

Whipworm and roundworm infections

inferredcites →https://doi.org/10.1038/s41587-023-01688-wopenalex-snapshot

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

inferredcites →https://doi.org/10.1038/s41590-020-0602-zopenalex-snapshot

Distinct microbial and immune niches of the human colon

inferredcites →https://doi.org/10.1080/19490976.2015.1044711openalex-snapshot

High throughput sequencing reveals distinct microbial populations within the mucosal and luminal niches in healthy individuals

inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot

Fast and accurate short read alignment with Burrows–Wheeler transform

inferredcites →https://doi.org/10.1093/bioinformatics/btz848openalex-snapshot

GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database

inferredcites →https://doi.org/10.1093/cid/ciy423openalex-snapshot

Efficacy of Anthelminthic Drugs and Drug Combinations Against Soil-transmitted Helminths: A Systematic Review and Network Meta-analysis

inferredcites →https://doi.org/10.1093/ilar/ilv021openalex-snapshot

Manipulating the Gut Microbiota: Methods and Challenges: Figure 1

inferredcites →https://doi.org/10.1099/ijs.0.02241-0openalex-snapshot

Growth requirements and fermentation products of Fusobacterium prausnitzii, and a proposal to reclassify it as Faecalibacterium prausnitzii gen. nov., comb. nov

inferredcites →https://doi.org/10.1101/2022.02.28.482289openalex-snapshot

Mucin-degrading gut bacteria promote anti-parasitic immunity

inferredcites →https://doi.org/10.1111/mec.14473openalex-snapshot

Rates of gut microbiome divergence in mammals

inferredcites →https://doi.org/10.1111/pim.12394openalex-snapshot

Mucosal and systemic immune modulation by Trichuris trichiura in a self‐infected individual

inferredcites →https://doi.org/10.1126/sciadv.aap7399openalex-snapshot

Manipulation of host and parasite microbiotas: Survival strategies during chronic nematode infection

inferredcites →https://doi.org/10.1126/science.1187703openalex-snapshot

Exploitation of the Intestinal Microflora by the Parasitic Nematode Trichuris muris

inferredcites →https://doi.org/10.1136/bmj.2.5321.1726openalex-snapshot

Whipworms in a Cambridgeshire Village

inferredcites →https://doi.org/10.1136/bmj.j4307openalex-snapshot

Efficacy of recommended drugs against soil transmitted helminths: systematic review and network meta-analysis

inferredcites →https://doi.org/10.1136/gutjnl-2022-328166openalex-snapshot

Advancing human gut microbiota research by considering gut transit time

inferredcites →https://doi.org/10.1139/z81-091openalex-snapshot

The hatching process in Trichuris muris (Nematoda: Trichuroidea)

inferredcites →https://doi.org/10.1186/s13071-015-0986-zopenalex-snapshot

Bacteria-induced egg hatching differs for Trichuris muris and Trichuris suis

inferredcites →https://doi.org/10.1186/s13071-016-1325-8openalex-snapshot

Whipworms in humans and pigs: origins and demography

inferredcites →https://doi.org/10.1186/s40168-018-0416-5openalex-snapshot

Differential human gut microbiome assemblages during soil-transmitted helminth infections in Indonesia and Liberia

inferredcites →https://doi.org/10.1186/s42523-024-00318-3openalex-snapshot

Gut microbiota and immune profiling of microbiota-humanised versus wildtype mouse models of hepatointestinal schistosomiasis

inferredcites →https://doi.org/10.1371/journal.pcbi.1009442openalex-snapshot

Multivariable association discovery in population-scale meta-omics studies

inferredcites →https://doi.org/10.1371/journal.pntd.0010878openalex-snapshot

The gut microbial metabolic capacity of microbiome-humanized vs. wild type rodents reveals a likely dual role of intestinal bacteria in hepato-intestinal schistosomiasis

inferredcites →https://doi.org/10.1371/journal.pone.0125495openalex-snapshot

Chronic Trichuris muris Infection Decreases Diversity of the Intestinal Microbiota and Concomitantly Increases the Abundance of Lactobacilli

inferredcites →https://doi.org/10.1371/journal.pone.0125945openalex-snapshot

Chronic Trichuris muris Infection in C57BL/6 Mice Causes Significant Changes in Host Microbiota and Metabolome: Effects Reversed by Pathogen Clearance

inferredcites →https://doi.org/10.1371/journal.pone.0195481openalex-snapshot

Ancient DNA from latrines in Northern Europe and the Middle East (500 BC–1700 AD) reveals past parasites and diet

inferredcites →https://doi.org/10.1371/journal.ppat.1007265openalex-snapshot

Exclusive dependence of IL-10Rα signalling on intestinal microbiota homeostasis and control of whipworm infection

inferredcites →https://doi.org/10.1371/journal.ppat.1011647openalex-snapshot

Bacterial contact induces polar plug disintegration to mediate whipworm egg hatching

inferredcites →https://doi.org/10.1371/journal.ppat.1012502openalex-snapshot

Hatching of whipworm eggs induced by bacterial contact is serine-protease dependent

inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot

Cutadapt removes adapter sequences from high-throughput sequencing reads

inferredcites →https://doi.org/10.1590/s0074-02762003000100014openalex-snapshot

Development of Hepatozoon caimani (Carini, 1909) Pessôa, De Biasi & De Souza, 1972 in the Caiman Caiman c. crocodilus, the frog Rana catesbeiana and the mosquito Culex fatigans

inferredcites →https://doi.org/10.17863/cam.45970openalex-snapshot

Characterising antibiotic susceptibility and resistance in human commensal gut bacteria

inferredcites →https://doi.org/10.32614/cran.package.veganopenalex-snapshot

vegan: Community Ecology Package

inferredcites →https://doi.org/10.3389/fcimb.2020.00151openalex-snapshot

Current Sampling Methods for Gut Microbiota: A Call for More Precise Devices

inferredcites →https://doi.org/10.3389/fimmu.2020.593838openalex-snapshot

Baseline Gut Microbiota Composition Is Associated With Schistosoma mansoni Infection Burden in Rodent Models

inferredcites →https://doi.org/10.3389/fvets.2020.626120openalex-snapshot

Trichuris trichiura (Linnaeus, 1771) From Human and Non-human Primates: Morphology, Biometry, Host Specificity, Molecular Characterization, and Phylogeny

inferredcites →https://doi.org/10.3764/aja.124.4.0631openalex-snapshot

Intestinal Parasitic Infection in the Eastern Roman Empire During the Imperial Period and Late Antiquity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41467-025-64516-6openalex-snapshot

Widespread Trichuris incognita reveals hidden diversity and reshapes understanding of human whipworm infections

inferred← citeshttps://doi.org/10.1101/2024.07.31.605962openalex-snapshot

Nanopore-based analysis unravels the genetic landscape and phylogenetic relationships of human-infecting Trichuris incognita and Trichuris trichiura in Côte d’Ivoire, Uganda, Tanzania, and Laos

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.