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Species interactions determine plasmid persistence in a 3-member bacterial community

https://doi.org/10.1101/2025.05.31.657151

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Competitive species interactions constrain abiotic adaptation in a bacterial soil community

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Data Analysis

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Effect of Genomic Location on Horizontal Transfer of a Recombinant Gene Cassette Between Pseudomonas Strains in the Rhizosphere and Spermosphere of Barley Seedlings

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Diversity of mercury resistance plasmids obtained by exogenous isolation from the bacteria of sugar beet in three successive years

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Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF 1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas

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The Evolution and Ecology of Bacterial Warfare

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Eco-evolutionary Dynamics Set the Tempo and Trajectory of Metabolic Evolution in Multispecies Communities

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The multiple antibiotic resistance IncP-1 plasmid pKJK5 isolated from a soil environment is phylogenetically divergent from members of the previously established α, β and δ sub-groups

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Critically evaluating the relative importance of phage in shaping microbial community composition

inferredcites →https://doi.org/10.1038/ismej.2013.182openalex-snapshot

Positive epistasis between co-infecting plasmids promotes plasmid survival in bacterial populations

inferredcites →https://doi.org/10.1038/ismej.2014.191openalex-snapshot

Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community

inferredcites →https://doi.org/10.1038/s41467-019-10706-yopenalex-snapshot

Urinary tract colonization is enhanced by a plasmid that regulates uropathogenic Acinetobacter baumannii chromosomal genes

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Variability of plasmid fitness effects contributes to plasmid persistence in bacterial communities

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Horizontal gene transfer is predicted to overcome the diversity limit of competing microbial species

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Ecological modelling approaches for predicting emergent properties in microbial communities

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Source–sink plasmid transfer dynamics maintain gene mobility in soil bacterial communities

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Evolution in Bacterial Plasmids and Levels of Selection

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NanoSIMS imaging of extracellular electron transport processes during microbial iron(III) reduction

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Convergence of virulence and MDR in a single plasmid vector in MDR Klebsiella pneumoniae ST15

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Coevolution with Bacteriophages Drives Genome-Wide Host Evolution and Constrains the Acquisition of Abiotic-Beneficial Mutations

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Introduction: the secret lives of microbial mobile genetic elements

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Why do plasmids manipulate the expression of bacterial phenotypes?

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Plasmid co-infection: linking biological mechanisms to ecological and evolutionary dynamics

inferredcites →https://doi.org/10.1099/13500872-140-1-27openalex-snapshot

In situ transfer of an exogenously isolated plasmid between Pseudomonas spp. in sugar beet rhizosphere

inferredcites →https://doi.org/10.1099/13500872-140-9-2315openalex-snapshot

Phenotypic and genotypic diversity of fluorescent pseudomonads isolated from field-grown sugar beet

inferredcites →https://doi.org/10.1099/mic.0.001086openalex-snapshot

The dilution effect limits plasmid horizontal transmission in multispecies bacterial communities

inferredcites →https://doi.org/10.1099/mic.0.001334openalex-snapshot

Removal of AMR plasmids using a mobile, broad host-range CRISPR-Cas9 delivery tool

inferredcites →https://doi.org/10.1101/2025.01.29.635536openalex-snapshot

Metabolic remodeling of microorganisms by obligate intracellular parasites alters mutualistic community composition

inferredcites →https://doi.org/10.1111/1462-2920.12901openalex-snapshot

Environmentally co‐occurring mercury resistance plasmids are genetically and phenotypically diverse and confer variable context‐dependent fitness effects

inferredcites →https://doi.org/10.1111/j.1365-294x.1995.tb00276.xopenalex-snapshot

Site directed chromosomal marking of a fluorescent pseudomonad isolated from the phytosphere of sugar beet; stability and potential for marker gene transfer.

inferredcites →https://doi.org/10.1111/j.1462-2920.2010.02260.xopenalex-snapshot

A thermophilic bacterial origin and subsequent constraints by redox, light and salinity on the evolution of the microbial mercuric reductase

inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01559.xopenalex-snapshot

THE EFFECT OF A COMPETITOR ON A MODEL ADAPTIVE RADIATION

inferredcites →https://doi.org/10.1126/science.277.5331.1453openalex-snapshot

The Complete Genome Sequence of Escherichia coli K-12

inferredcites →https://doi.org/10.1126/science.aat1168openalex-snapshot

Emergent simplicity in microbial community assembly

inferredcites →https://doi.org/10.1128/aem.63.4.1577-1583.1997openalex-snapshot

The acquisition of indigenous plasmids by a genetically marked pseudomonad population colonizing the sugar beet phytosphere is related to local environmental conditions

inferredcites →https://doi.org/10.1371/journal.pbio.1001330openalex-snapshot

Species Interactions Alter Evolutionary Responses to a Novel Environment

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Horizontal gene transfer and ecological interactions jointly control microbiome stability

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A chromosomal mutation is superior to a plasmid-encoded mutation for plasmid fitness cost compensation

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Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae

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Insertions and Duplications in the Polyproline Region of the Hepatitis E Virus

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Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems

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