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A quantitative model for characterizing the evolutionary history of mammalian gene expression

https://doi.org/10.1101/229096
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Systematic changes in gene expression patterns following adaptive evolution in yeast
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Incongruent Expression Profiles between Human and Mouse Orthologous Genes Suggest Widespread Neutral Evolution of Transcription Control
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The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics
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ClinVar: public archive of relationships among sequence variation and human phenotype
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Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR)
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Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse
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Ensembl 2017
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OUP accepted manuscript
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Measurement errors should always be incorporated in phylogenetic comparative analysis
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Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
inferredcites →https://doi.org/10.1126/science.1090005openalex-snapshot
Evolution at Two Levels in Humans and Chimpanzees
inferredcites →https://doi.org/10.1126/science.1228186openalex-snapshot
Evolutionary Dynamics of Gene and Isoform Regulation in Mammalian Tissues
inferredcites →https://doi.org/10.1126/science.276.5310.256openalex-snapshot
Phylogenetic Analysis of Glycolytic Enzyme Expression
inferredcites →https://doi.org/10.1126/science.287.5461.2204openalex-snapshot
Comparative Genomics of the Eukaryotes
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Gene Regulation in Primates Evolves under Tissue-Specific Selection Pressures
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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Identification of epistasis loci underlying rice flowering time by controlling population stratification and polygenic effect
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Measurement of selective constraint on human gene expression
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Evolution of regulatory networks associated with traits under selection in cichlids
inferred← citeshttps://doi.org/10.1101/gr.254904.119openalex-snapshot
A comparison of gene expression and DNA methylation patterns across tissues and species
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Drift and Directional Selection Are the Evolutionary Forces Driving Gene Expression Divergence in Eye and Brain Tissue of Heliconius Butterflies
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