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Measurement of selective constraint on human gene expression

https://doi.org/10.1101/345801
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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GCTA: A Tool for Genome-wide Complex Trait Analysis
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Improved Heritability Estimation from Genome-wide SNPs
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Transcriptome Sequencing of a Large Human Family Identifies the Impact of Rare Noncoding Variants
inferredcites →https://doi.org/10.1016/j.ajhg.2014.10.004openalex-snapshot
Partitioning Heritability of Regulatory and Cell-Type-Specific Variants across 11 Common Diseases
inferredcites →https://doi.org/10.1016/j.ajhg.2015.12.023openalex-snapshot
A Burden of Rare Variants Associated with Extremes of Gene Expression in Human Peripheral Blood
inferredcites →https://doi.org/10.1016/j.ajhg.2016.10.003openalex-snapshot
Colocalization of GWAS and eQTL Signals Detects Target Genes
inferredcites →https://doi.org/10.1016/j.cell.2017.05.038openalex-snapshot
An Expanded View of Complex Traits: From Polygenic to Omnigenic
inferredcites →https://doi.org/10.1023/a:1008800423698openalex-snapshot
Delete-m Jackknife for Unequal m
inferredcites →https://doi.org/10.1038/mp.2013.161openalex-snapshot
Type I interferon signaling genes in recurrent major depression: increased expression detected by whole-blood RNA sequencing
inferredcites →https://doi.org/10.1038/nature08872openalex-snapshot
Understanding mechanisms underlying human gene expression variation with RNA sequencing
inferredcites →https://doi.org/10.1038/nature10532openalex-snapshot
The evolution of gene expression levels in mammalian organs
inferredcites →https://doi.org/10.1038/nature13200openalex-snapshot
Domains of genome-wide gene expression dysregulation in Down’s syndrome
inferredcites →https://doi.org/10.1038/nature15393openalex-snapshot
A global reference for human genetic variation
inferredcites →https://doi.org/10.1038/nature19057openalex-snapshot
Analysis of protein-coding genetic variation in 60,706 humans
inferredcites →https://doi.org/10.1038/nature24267openalex-snapshot
The impact of rare variation on gene expression across tissues
inferredcites →https://doi.org/10.1038/nature24277openalex-snapshot
Genetic effects on gene expression across human tissues
inferredcites →https://doi.org/10.1038/ncomms1130openalex-snapshot
Deep resequencing reveals excess rare recent variants consistent with explosive population growth
inferredcites →https://doi.org/10.1038/ng.3200openalex-snapshot
Large multiallelic copy number variations in humans
inferredcites →https://doi.org/10.1038/ng.3211openalex-snapshot
LD Score regression distinguishes confounding from polygenicity in genome-wide association studies
inferredcites →https://doi.org/10.1038/ng.3367openalex-snapshot
A gene-based association method for mapping traits using reference transcriptome data
inferredcites →https://doi.org/10.1038/ng.3506openalex-snapshot
Integrative approaches for large-scale transcriptome-wide association studies
inferredcites →https://doi.org/10.1038/ng.3638openalex-snapshot
Patterns of genic intolerance of rare copy number variation in 59,898 human exomes
inferredcites →https://doi.org/10.1038/ng.768openalex-snapshot
Discovery and genotyping of genome structural polymorphism by sequencing on a population scale
inferredcites →https://doi.org/10.1038/ng1071openalex-snapshot
Meta-analysis of genetic association studies supports a contribution of common variants to susceptibility to common disease
inferredcites →https://doi.org/10.1038/ng2142openalex-snapshot
Population genomics of human gene expression
inferredcites →https://doi.org/10.1038/s41588-018-0101-4openalex-snapshot
Signatures of negative selection in the genetic architecture of human complex traits
inferredcites →https://doi.org/10.1038/s41588-018-0108-xopenalex-snapshot
Comparison of methods that use whole genome data to estimate the heritability and genetic architecture of complex traits
inferredcites →https://doi.org/10.1073/pnas.1019276108openalex-snapshot
Demographic history and rare allele sharing among human populations
inferredcites →https://doi.org/10.1086/324471openalex-snapshot
Large Upward Bias in Estimation of Locus-Specific Effects from Genomewide Scans
inferredcites →https://doi.org/10.1101/219238openalex-snapshot
Ultra-rare variants drive substantial cis -heritability of human gene expression
inferredcites →https://doi.org/10.1101/229096openalex-snapshot
A quantitative model for characterizing the evolutionary history of mammalian gene expression
inferredcites →https://doi.org/10.1101/gr.076521.108openalex-snapshot
Genome-wide nucleotide-level mammalian ancestor reconstruction
inferredcites →https://doi.org/10.1101/gr.155192.113openalex-snapshot
Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals
inferredcites →https://doi.org/10.1101/gr.197897.115openalex-snapshot
Impact of the X Chromosome and sex on regulatory variation
inferredcites →https://doi.org/10.1126/science.1217283openalex-snapshot
Recent Explosive Human Population Growth Has Resulted in an Excess of Rare Genetic Variants
inferredcites →https://doi.org/10.1126/science.1242379openalex-snapshot
Primate Transcript and Protein Expression Levels Evolve Under Compensatory Selection Pressures
inferredcites →https://doi.org/10.1126/science.aad8411openalex-snapshot
Coregulation of tandem duplicate genes slows evolution of subfunctionalization in mammals
inferredcites →https://doi.org/10.1186/gb-2012-13-1-r1openalex-snapshot
Genetic adaptation to high altitude in the Ethiopian highlands
inferredcites →https://doi.org/10.1186/gb-2012-13-1-r7openalex-snapshot
Dissecting the regulatory architecture of gene expression QTLs
inferredcites →https://doi.org/10.1186/gb-2014-15-1-r1openalex-snapshot
Dynamic regulation of genome-wide pre-mRNA splicing and stress tolerance by the Sm-like protein LSm5 in Arabidopsis
inferredcites →https://doi.org/10.1186/gb-2014-15-6-r84openalex-snapshot
LUMPY: a probabilistic framework for structural variant discovery
inferredcites →https://doi.org/10.1186/jbiol130openalex-snapshot
Conservation of core gene expression in vertebrate tissues
inferredcites →https://doi.org/10.1371/journal.pbio.1000294openalex-snapshot
Rare Variants Create Synthetic Genome-Wide Associations
inferredcites →https://doi.org/10.1371/journal.pbio.1000462openalex-snapshot
TRIM5 Suppresses Cross-Species Transmission of a Primate Immunodeficiency Virus and Selects for Emergence of Resistant Variants in the New Species
inferredcites →https://doi.org/10.1371/journal.pbio.2002985openalex-snapshot
A population genetic interpretation of GWAS findings for human quantitative traits
inferredcites →https://doi.org/10.1371/journal.pgen.1000214openalex-snapshot
High-Resolution Mapping of Expression-QTLs Yields Insight into Human Gene Regulation
inferredcites →https://doi.org/10.1371/journal.pgen.1000888openalex-snapshot
Trait-Associated SNPs Are More Likely to Be eQTLs: Annotation to Enhance Discovery from GWAS
inferredcites →https://doi.org/10.1371/journal.pgen.1003486openalex-snapshot
A Statistical Framework for Joint eQTL Analysis in Multiple Tissues
inferredcites →https://doi.org/10.1371/journal.pgen.1004383openalex-snapshot
Bayesian Test for Colocalisation between Pairs of Genetic Association Studies Using Summary Statistics
inferredcites →https://doi.org/10.1371/journal.pgen.1004775openalex-snapshot
Genomic Evidence of Rapid and Stable Adaptive Oscillations over Seasonal Time Scales in Drosophila
inferredcites →https://doi.org/10.1371/journal.pgen.1004942openalex-snapshot
Aberrant Gene Expression in Humans
inferredcites →https://doi.org/10.1371/journal.pgen.1006423openalex-snapshot
Survey of the Heritability and Sparse Architecture of Gene Expression Traits across Human Tissues
inferredcites →https://doi.org/10.1534/g3.117.043752openalex-snapshot
Constraints on eQTL Fine Mapping in the Presence of Multisite Local Regulation of Gene Expression
inferredcites →https://doi.org/10.7554/elife.04729openalex-snapshot
The genetic architecture of gene expression levels in wild baboons

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.cell.2019.04.014openalex-snapshot
Trans Effects on Gene Expression Can Drive Omnigenic Inheritance
inferred← citeshttps://doi.org/10.1038/s41588-019-0487-7openalex-snapshot
Ultrarare variants drive substantial cis heritability of human gene expression
inferred← citeshttps://doi.org/10.1098/rspb.2021.1985openalex-snapshot
Novel patterns of expression and recruitment of new genes on the t -haplotype, a mouse selfish chromosome
inferred← citeshttps://doi.org/10.1101/219238openalex-snapshot
Ultra-rare variants drive substantial cis -heritability of human gene expression
inferred← citeshttps://doi.org/10.2196/37701openalex-snapshot
Diagnosis of a Single-Nucleotide Variant in Whole-Exome Sequencing Data for Patients With Inherited Diseases: Machine Learning Study Using Artificial Intelligence Variant Prioritization
inferred← citeshttps://doi.org/10.3410/f.736535895.793565176openalex-snapshot
Faculty Opinions recommendation of Ultrarare variants drive substantial cis heritability of human gene expression.
inferred← citeshttps://doi.org/10.3410/f.736535895.793569055openalex-snapshot
Faculty Opinions recommendation of Ultrarare variants drive substantial cis heritability of human gene expression.
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