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Metagenomic signature of natural strongyle infection in susceptible and resistant horses

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Alteration of the murine gut microbiota during infection with the parasitic helminth Heligmosomoides polygyrus
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Estimation of genetic parameters for resistance to gastro-intestinal nematodes in pure blood Arabian horses
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Anthelmintic resistance in equine nematodes
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Risk factor analysis of equine strongyle resistance to anthelmintics
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The Intestinal Microbiota Contributes to the Ability of Helminths to Modulate Allergic Inflammation
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Effects of Feeding Management on the Equine Cecal Microbiota
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Helminths and Intestinal Flora Team Up to Improve Gut Health
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Climatic influences on development and survival of free-living stages of equine strongyles: Implications for worm control strategies and managing anthelmintic resistance
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Characterization and comparison of the bacterial microbiota in different gastrointestinal tract compartments in horses
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Illustrated identification keys to strongylid parasites (strongylidae: Nematoda) of horses, zebras and asses (Equidae)
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Strongylus vulgaris associated with usage of selective therapy on Danish horse farms—Is it reemerging?
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Decreased strongyle egg re-appearance period after treatment with ivermectin and moxidectin in horses in Belgium, Italy and The Netherlands
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Economic assessment of FEC-based targeted selective drenching in horses
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Efficacy of major anthelmintics for reduction of fecal shedding of strongyle-type eggs in horses in the Mid-Atlantic region of the United States
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Comparison of the larvicidal efficacies of moxidectin or a five-day regimen of fenbendazole in horses harboring cyathostomin populations resistant to the adulticidal dosage of fenbendazole
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Strongylids in domestic horses: Influence of horse age, breed and deworming programs on the strongyle parasite community
inferredcites →https://doi.org/10.1016/j.vetpar.2016.08.021openalex-snapshot
Repeatability of strongyle egg counts in naturally infected horses
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The pathogenic effects of experimental cyathostome infections in ponies
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Historical perspective of cyathostomes: prevalence, treatment and control programs
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Pathogenicity of cyathostome infection
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Larval Cyathostomiasis
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The prevalence, relative abundance and site distribution of nematodes of the subfamily Cyathostominae in horses killed in Britain
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Variation in fecal egg counts in horses managed for conservation purposes: individual egg shedding consistency, age effects and seasonal variation
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Negative covariance between parasite load and body condition in a population of feral horses
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Menaquinone (vitamin K2) biosynthesis in Escherichia coli: synthesis of o-succinylbenzoate does not require the decarboxylase activity of the ketoglutarate dehydrogenase complex
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Helminth burden and ecological factors associated with alterations in wild host gastrointestinal microbiota
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Phylogenetic network analysis applied to pig gut microbiota identifies an ecosystem structure linked with growth traits
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Helminth-induced alterations of the gut microbiota exacerbate bacterial colitis
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Butyrate-producing bacteria supplemented in vitro to Crohn’s disease patient microbiota increased butyrate production and enhanced intestinal epithelial barrier integrity
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The effect of helminth infection on the microbial composition and structure of the caprine abomasal microbiome
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Facultative bacterial symbionts in aphids confer resistance to parasitic wasps
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Anthelmintic resistance in equine helminth parasites – a growing issue for horse owners and veterinarians in New Zealand?
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Alteration of the rat cecal microbiome during colonization with the helminthHymenolepis diminuta
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Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks
inferredcites →https://doi.org/10.1093/bioinformatics/btq461openalex-snapshot
Search and clustering orders of magnitude faster than BLAST
inferredcites →https://doi.org/10.1093/bioinformatics/btr381openalex-snapshot
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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
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MedlineRanker: flexible ranking of biomedical literature
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Parasite–microbiota interactions potentially affect intestinal communities in wild mammals
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Faecal worm egg count analysis for targeting anthelmintic treatment in horses: Points to consider
inferredcites →https://doi.org/10.1111/evj.12361openalex-snapshot
Changes in the faecal microbiota of mares precede the development of post partum colic
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Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons
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VEGAN, a package of R functions for community ecology
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Larval cyathostomiasis (immature trichonema‐induced enteropathy): A report of 15 clinical cases
inferredcites →https://doi.org/10.1111/pim.12274openalex-snapshot
Interactions between the intestinal microbiome and helminth parasites
inferredcites →https://doi.org/10.1113/expphysiol.2014.077982openalex-snapshot
Characterization of butyrate transport across the luminal membranes of equine large intestine
inferredcites →https://doi.org/10.1126/science.1198469openalex-snapshot
Induction of Colonic Regulatory T Cells by Indigenous Clostridium Species
inferredcites →https://doi.org/10.1126/science.1223813openalex-snapshot
Host-Gut Microbiota Metabolic Interactions
inferredcites →https://doi.org/10.1126/science.1256942openalex-snapshot
Virus-helminth coinfection reveals a microbiota-independent mechanism of immunomodulation
inferredcites →https://doi.org/10.1126/science.aaf1648openalex-snapshot
Tuft cells, taste-chemosensory cells, orchestrate parasite type 2 immunity in the gut
inferredcites →https://doi.org/10.1126/science.aaf3229openalex-snapshot
Helminth infection promotes colonization resistance via type 2 immunity
inferredcites →https://doi.org/10.1128/aem.03006-05openalex-snapshot
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
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Enumeration of anaerobic bacterial microflora of the equine gastrointestinal tract
inferredcites →https://doi.org/10.1128/iai.00141-12openalex-snapshot
Alterations in the Porcine Colon Microbiota Induced by the Gastrointestinal Nematode Trichuris suis
inferredcites →https://doi.org/10.1136/gutjnl-2015-311326openalex-snapshot
The effect of heritability and host genetics on the gut microbiota and metabolic syndrome
inferredcites →https://doi.org/10.1136/vr.101804openalex-snapshot
A cost comparison of faecal egg count‐directed anthelmintic delivery versus interval programme treatments in horses
inferredcites →https://doi.org/10.1186/1471-2164-10-492openalex-snapshot
Expulsion of Trichuris muris is associated with increased expression of angiogenin 4 in the gut and increased acidity of mucins within the goblet cell
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Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis
inferredcites →https://doi.org/10.1186/1756-3305-2-s2-s1openalex-snapshot
Equine cyathostomins: a review of biology, clinical significance and therapy
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Type 2 immunity-dependent reduction of segmented filamentous bacteria in mice infected with the helminthic parasite Nippostrongylus brasiliensis
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Differences in folate production by bifidobacteria of different origins
inferredcites →https://doi.org/10.1371/journal.pntd.0002880openalex-snapshot
Helminth Colonization Is Associated with Increased Diversity of the Gut Microbiota
inferredcites →https://doi.org/10.1371/journal.pone.0009490openalex-snapshot
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
inferredcites →https://doi.org/10.1371/journal.pone.0024417openalex-snapshot
Metagenome Plasticity of the Bovine Abomasal Microbiota in Immune Animals in Response to Ostertagia Ostertagi Infection
inferredcites →https://doi.org/10.1371/journal.pone.0035470openalex-snapshot
Worm Burden-Dependent Disruption of the Porcine Colon Microbiota by Trichuris suis Infection
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Patent Human Infections with the Whipworm, Trichuris trichiura, Are Not Associated with Alterations in the Faecal Microbiota
inferredcites →https://doi.org/10.1371/journal.pone.0077660openalex-snapshot
Identification of a Core Bacterial Community within the Large Intestine of the Horse
inferredcites →https://doi.org/10.1371/journal.pone.0125495openalex-snapshot
Chronic Trichuris muris Infection Decreases Diversity of the Intestinal Microbiota and Concomitantly Increases the Abundance of Lactobacilli
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Chronic Trichuris muris Infection in C57BL/6 Mice Causes Significant Changes in Host Microbiota and Metabolome: Effects Reversed by Pathogen Clearance
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Infection by Toxoplasma gondii Induces Amoeboid-Like Migration of Dendritic Cells in a Three-Dimensional Collagen Matrix
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The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing Pipeline
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Spatial Distribution of the Metabolically Active Microbiota within Italian PDO Ewes' Milk Cheeses
inferredcites →https://doi.org/10.1371/journal.pone.0159770openalex-snapshot
Impact of Helminth Infections and Nutritional Constraints on the Small Intestine Microbiota
inferredcites →https://doi.org/10.1371/journal.pone.0162755openalex-snapshot
Opposite Effects of mGluR1a and mGluR5 Activation on Nucleus Accumbens Medium Spiny Neuron Dendritic Spine Density
inferredcites →https://doi.org/10.1371/journal.pone.0166523openalex-snapshot
A Microbiological Map of the Healthy Equine Gastrointestinal Tract
inferredcites →https://doi.org/10.1371/journal.ppat.1004014openalex-snapshot
Wormholes in Host Defense: How Helminths Manipulate Host Tissues to Survive and Reproduce
inferredcites →https://doi.org/10.3168/jds.2007-0540openalex-snapshot
Invited Review: Genes Involved in the Bovine Heat Stress Response
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Methods for Dietary Fiber, Neutral Detergent Fiber, and Nonstarch Polysaccharides in Relation to Animal Nutrition
inferredcites →https://doi.org/10.3389/fcimb.2017.00144openalex-snapshot
Reciprocal Interactions between Nematodes and Their Microbial Environments
inferredcites →https://doi.org/10.3389/fphys.2017.00535openalex-snapshot
The Effects of Weaning Methods on Gut Microbiota Composition and Horse Physiology
inferredcites →https://doi.org/10.4049/jimmunol.1401056openalex-snapshot
MyD88 Signaling Inhibits Protective Immunity to the Gastrointestinal Helminth Parasite Heligmosomoides polygyrus
inferredcites →https://doi.org/10.4049/jimmunol.1501432openalex-snapshot
Cohabitation in the Intestine: Interactions among Helminth Parasites, Bacterial Microbiota, and Host Immunity
inferredcites →https://doi.org/10.4049/jimmunol.165.8.4544openalex-snapshot
Role of IL-5 in Innate and Adaptive Immunity to Larval Strongyloides stercoralis in Mice
inferredcites →https://doi.org/10.4056/sigs.1984594openalex-snapshot
Complete genome sequence of Treponema succinifaciens type strain (6091T)
inferredcites →https://doi.org/10.4135/9781412959384.n229openalex-snapshot
Mathematical Theory of Communication
inferredcites →https://doi.org/10.4161/gmic.32155openalex-snapshot
Commensal-pathogen interactions in the intestinal tract
inferredcites →https://doi.org/10.7717/peerj.545openalex-snapshot
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
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