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Exploratory re-encoding of Yellow Fever Virus genome: new insights for the design of live-attenuated viruses
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Preliminary Tests of a Highly Attenuated Measles Vaccine
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Development and Evaluation of the Moraten Measles Virus Vaccine
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Immunity and immune response, pathology and pathologic changes: progress and challenges in the immunopathology of yellow fever
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The enigma of yellow fever in East Africa
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Amino-terminal amino acid sequences of structural proteins of three flaviviruses
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History of Sabin attenuated poliovirus oral live vaccine strains
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Yellow fever vaccine
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Treatment of yellow fever
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Evolutionary and ecological factors underlying the tempo and distribution of yellow fever virus activity
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Fever versus fever: The role of host and vector susceptibility and interspecific competition in shaping the current and future distributions of the sylvatic cycles of dengue virus and yellow fever virus
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Synonymous Virus Genome Recoding as a Tool to Impact Viral Fitness
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WHO Working Group on Technical Specifications for Manufacture and Evaluation of Yellow Fever Vaccines, Geneva, Switzerland, 13–14 May 2009
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Genetic characterization of tick-borne flaviviruses: New insights into evolution, pathogenetic determinants and taxonomy
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Direct repeats in the flavivirus 3′ untranslated region; a strategy for survival in the environment?
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Origin and evolution of flavivirus 5′UTRs and panhandles: Trans-terminal duplications?
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Attenuation of Marek's disease virus by codon pair deoptimization of a core gene
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Genome-scale relationships between cytosine methylation and dinucleotide abundances in animals
inferredcites →https://doi.org/10.1016/s0065-3527(03)60009-6openalex-snapshot
Pathogenesis and Pathophysiology of Yellow Fever
inferredcites →https://doi.org/10.1016/s0140-6736(08)60238-xopenalex-snapshot
Pathogenic flaviviruses
inferredcites →https://doi.org/10.1016/s0891-5849(02)00902-4openalex-snapshot
Repair of deaminated bases in DNA
inferredcites →https://doi.org/10.1016/s1473-3099(16)30513-8openalex-snapshot
Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015–16: a modelling study
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Architecture and secondary structure of an entire HIV-1 RNA genome
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Live attenuated influenza virus vaccines by computer-aided rational design
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A synonymous variant in IRGM alters a binding site for miR-196 and causes deregulation of IRGM-dependent xenophagy in Crohn's disease
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Attenuation of RNA viruses by redirecting their evolution in sequence space
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Evolutionary conservation of codon optimality reveals hidden signatures of cotranslational folding
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Molecular determinants of Yellow Fever Virus pathogenicity in Syrian Golden Hamsters: one mutation away from virulence
inferredcites →https://doi.org/10.1038/s41598-017-07873-7openalex-snapshot
Phylodynamics of Yellow Fever Virus in the Americas: new insights into the origin of the 2017 Brazilian outbreak
inferredcites →https://doi.org/10.1073/pnas.0307827100openalex-snapshot
Codon usage between genomes is constrained by genome-wide mutational processes
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Attenuation of human respiratory syncytial virus by genome-scale codon-pair deoptimization
inferredcites →https://doi.org/10.1073/pnas.1502864112openalex-snapshot
Large-scale recoding of an arbovirus genome to rebalance its insect versus mammalian preference
inferredcites →https://doi.org/10.1073/pnas.1507339112openalex-snapshot
Attenuation of dengue (and other RNA viruses) with codon pair recoding can be explained by increased CpG/UpA dinucleotide frequencies
inferredcites →https://doi.org/10.1084/jem.65.6.767openalex-snapshot
THE EFFECT OF PROLONGED CULTIVATION IN VITRO UPON THE PATHOGENICITY OF YELLOW FEVER VIRUS
inferredcites →https://doi.org/10.1086/425016openalex-snapshot
Activation of the Cytokine Network and Unfavorable Outcome in Patients with Yellow Fever
inferredcites →https://doi.org/10.1093/nar/8.7.1499openalex-snapshot
DNA methylation and the frequency of CpG in animal DNA
inferredcites →https://doi.org/10.1093/nar/gkl287openalex-snapshot
A periodic pattern of mRNA secondary structure created by the genetic code
inferredcites →https://doi.org/10.1093/nar/gku075openalex-snapshot
The influence of CpG and UpA dinucleotide frequencies on RNA virus replication and characterization of the innate cellular pathways underlying virus attenuation and enhanced replication
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Codon usage and tRNA content in unicellular and multicellular organisms.
inferredcites →https://doi.org/10.1099/0022-1317-76-11-2749openalex-snapshot
Comparison of the genomes of the wild-type French viscerotropic strain of yellow fever virus with its vaccine derivative French neurotropic vaccine
inferredcites →https://doi.org/10.1099/0022-1317-78-11-2859openalex-snapshot
Dinucleotide and stop codon frequencies in single-stranded RNA viruses.
inferredcites →https://doi.org/10.1099/0022-1317-82-8-1867openalex-snapshot
Phylogenetic relationships of flaviviruses correlate with their epidemiology, disease association and biogeography
inferredcites →https://doi.org/10.1099/vir.0.036988-0openalex-snapshot
The polio-eradication programme and issues of the end game
inferredcites →https://doi.org/10.1099/vir.0.068023-0openalex-snapshot
Single-stranded positive-sense RNA viruses generated in days using infectious subgenomic amplicons
inferredcites →https://doi.org/10.1099/vir.0.19462-0openalex-snapshot
Conserved RNA secondary structures in Flaviviridae genomes
inferredcites →https://doi.org/10.1099/vir.0.82235-0openalex-snapshot
Direct repeats in the 3′ untranslated regions of mosquito-borne flaviviruses: possible implications for virus transmission
inferredcites →https://doi.org/10.1101/gr.133546.111openalex-snapshot
Coding exons function as tissue-specific enhancers of nearby genes
inferredcites →https://doi.org/10.1111/j.1750-3639.2003.tb00028.xopenalex-snapshot
Acute Encephalitis, a Poliomyelitis‐like Syndrome and Neurological Sequelae in a Hamster Model for Flavivirus Infections
inferredcites →https://doi.org/10.1126/science.1170160openalex-snapshot
Coding-Sequence Determinants of Gene Expression in Escherichia coli
inferredcites →https://doi.org/10.1126/science.4023707openalex-snapshot
Nucleotide Sequence of Yellow Fever Virus: Implications for Flavivirus Gene Expression and Evolution
inferredcites →https://doi.org/10.1128/aac.02932-15openalex-snapshot
Enhancement of the Replication of Hepatitis C Virus Replicons of Genotypes 1 to 4 by Manipulation of CpG and UpA Dinucleotide Frequencies and Use of Cell Lines Expressing SECL14L2 for Antiviral Resistance Testing
inferredcites →https://doi.org/10.1128/jvi.00738-06openalex-snapshot
Reduction of the Rate of Poliovirus Protein Synthesis through Large-Scale Codon Deoptimization Causes Attenuation of Viral Virulence by Lowering Specific Infectivity
inferredcites →https://doi.org/10.1128/jvi.01908-10openalex-snapshot
Oligonucleotide Motifs That Disappear during the Evolution of Influenza Virus in Humans Increase Alpha Interferon Secretion by Plasmacytoid Dendritic Cells
inferredcites →https://doi.org/10.1128/jvi.68.5.2889-2897.1994openalex-snapshot
Why is CpG suppressed in the genomes of virtually all small eukaryotic viruses but not in those of large eukaryotic viruses?
inferredcites →https://doi.org/10.1128/jvi.72.1.73-83.1998openalex-snapshot
Phylogeny of the Genus Flavivirus
inferredcites →https://doi.org/10.1128/jvi.77.19.10423-10431.2003openalex-snapshot
Recombination in Circulating Enteroviruses
inferredcites →https://doi.org/10.1128/jvi.77.2.1462-1468.2003openalex-snapshot
Molecular Characterization of a Hamster Viscerotropic Strain of Yellow Fever Virus
inferredcites →https://doi.org/10.1128/jvi.80.7.3259-3272.2006openalex-snapshot
Modulation of Poliovirus Replicative Fitness in HeLa Cells by Deoptimization of Synonymous Codon Usage in the Capsid Region
inferredcites →https://doi.org/10.1177/0049475517699726openalex-snapshot
Yellow fever from Angola and Congo: a storm gathers
inferredcites →https://doi.org/10.1186/1471-2105-11-451openalex-snapshot
VIGOR, an annotation program for small viral genomes
inferredcites →https://doi.org/10.1186/1742-4690-10-78openalex-snapshot
Changes in codon-pair bias of human immunodeficiency virus type 1 have profound effects on virus replication in cell culture
inferredcites →https://doi.org/10.1186/1756-0500-5-50openalex-snapshot
SSE: a nucleotide and amino acid sequence analysis platform
inferredcites →https://doi.org/10.1186/s12985-016-0615-2openalex-snapshot
Characterization of four vaccine-related polioviruses including two intertypic type 3/type 2 recombinants associated with aseptic encephalitis
inferredcites →https://doi.org/10.1371/journal.pone.0005969openalex-snapshot
Patterns of Oligonucleotide Sequences in Viral and Host Cell RNA Identify Mediators of the Host Innate Immune System
inferredcites →https://doi.org/10.1371/journal.pone.0117849openalex-snapshot
New Insights into Flavivirus Evolution, Taxonomy and Biogeographic History, Extended by Analysis of Canonical and Alternative Coding Sequences
inferredcites →https://doi.org/10.1371/journal.ppat.1000079openalex-snapshot
Patterns of Evolution and Host Gene Mimicry in Influenza and Other RNA Viruses
inferredcites →https://doi.org/10.1371/journal.ppat.1003172openalex-snapshot
Random Codon Re-encoding Induces Stable Reduction of Replicative Fitness of Chikungunya Virus in Primate and Mosquito Cells
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Attenuation of Tick-Borne Encephalitis Virus Using Large-Scale Random Codon Re-encoding
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Review of the risks and benefits of yellow fever vaccination including some new analyses
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Live Attenuated Mumps Virus Vaccine. 1. Vaccine Development
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The 5′ and 3′ Untranslated Regions of the Flaviviral Genome
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Pathogenesis of Modoc Virus (Flaviviridae; Flavivirus) in Persistently Infected Hamsters
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Long-Term Persistence of Modoc Virus in Hamster-Kidney Cells
inferredcites →https://doi.org/10.7554/elife.04531openalex-snapshot
RNA virus attenuation by codon pair deoptimisation is an artefact of increases in CpG/UpA dinucleotide frequencies
inferredcites →https://doi.org/10.7554/elife.12735openalex-snapshot
Elevation of CpG frequencies in influenza A genome attenuates pathogenicity but enhances host response to infection
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