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Transcriptomic analyses reveal tissue-specific selection on genes related to apoptotic processes in the subterranean rodent, Ctenomys sociabilis

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Oxytocin and vasopressin receptor distributions in a solitary and a social species of tuco‐tuco ( Ctenomys haigi and Ctenomys sociabilis )

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Parasite infection negatively affects PHA-triggered inflammation in the subterranean rodentCtenomys talarum

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LIM kinases: function, regulation and association with human disease

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Pim-1 associates with protein complexes necessary for mitosis

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Variability of whipworm infection and humoral immune response in a wild population of mole voles (Ellobius talpinus Pall.)

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Mechanics of soft epithelial keratin networks depend on modular filament assembly kinetics

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Lim kinases, regulators of actin dynamics

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Heavy metal concentration in mangrove surface sediments from the north-west coast of South America

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inferredcites →https://doi.org/10.1016/j.neuron.2009.09.044openalex-snapshot

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Circadian rhythms of locomotor activity in the subterranean Mashona mole rat, Cryptomys darlingi

inferredcites →https://doi.org/10.1016/j.semcdb.2014.02.010openalex-snapshot

Hormonal control of germ cell development and spermatogenesis

inferredcites →https://doi.org/10.1016/j.theriogenology.2016.04.063openalex-snapshot

Multiscale mathematical modeling of the hypothalamo-pituitary-gonadal axis

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Fast skeletal muscle myosin light chains 1 and 3 are produced from a single gene by a combined process of differential RNA transcription and splicing.

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Discrete expression of insulin receptor substrate-4 mRNA in adult rat brain

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Che-1 affects cell growth by interfering with the recruitment of HDAC1 by Rb

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Double dissociation of function within the hippocampus: Spatial memory and hyponeophagia.

inferredcites →https://doi.org/10.1038/4151030aopenalex-snapshot

Functional neurogenesis in the adult hippocampus

inferredcites →https://doi.org/10.1038/nature12234openalex-snapshot

High-molecular-mass hyaluronan mediates the cancer resistance of the naked mole rat

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Long-term exposure to abnormal glucose levels alters drug metabolism pathways and insulin sensitivity in primary human hepatocytes

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inferredcites →https://doi.org/10.1039/c4mt00108gopenalex-snapshot

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inferredcites →https://doi.org/10.1042/bst20140290openalex-snapshot

Retromer and sorting nexins in endosomal sorting

inferredcites →https://doi.org/10.1046/j.1365-2540.2001.00881.xopenalex-snapshot

Microsatellite variation in solitary and social tuco-tucos: molecular properties and population dynamics

inferredcites →https://doi.org/10.1053/j.ackd.2012.07.009openalex-snapshot

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Hemostatic Abnormalities and Liver Diseases

inferredcites →https://doi.org/10.1071/am01075_bropenalex-snapshot

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inferredcites →https://doi.org/10.1073/pnas.0505043102openalex-snapshot

Evolutionary regulation of the blind subterranean mole rat, Spalax , revealed by genome-wide gene expression

inferredcites →https://doi.org/10.1073/pnas.051605998openalex-snapshot

Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals

inferredcites →https://doi.org/10.1073/pnas.080071397openalex-snapshot

Evolution of the rodent eosinophil-associated RNase gene family by rapid gene sorting and positive selection

inferredcites →https://doi.org/10.1073/pnas.0905252106openalex-snapshot

Hypersensitivity to contact inhibition provides a clue to cancer resistance of naked mole-rat

inferredcites →https://doi.org/10.1073/pnas.0912094107openalex-snapshot

RFWD3–Mdm2 ubiquitin ligase complex positively regulates p53 stability in response to DNA damage

inferredcites →https://doi.org/10.1073/pnas.1313473110openalex-snapshot

Naked mole-rat has increased translational fidelity compared with the mouse, as well as a unique 28S ribosomal RNA cleavage

inferredcites →https://doi.org/10.1073/pnas.1606751113openalex-snapshot

Biomechanics of red blood cells in human spleen and consequences for physiology and disease

inferredcites →https://doi.org/10.1073/pnas.72.5.1702openalex-snapshot

South American mammal zoogeography: evidence from convergent evolution in desert rodents.

inferredcites →https://doi.org/10.1074/jbc.273.28.17618openalex-snapshot

Isolation and Characterization of PAGE-1 andGAGE-7

inferredcites →https://doi.org/10.1074/jbc.m109.046755openalex-snapshot

The Deubiquitinating Enzyme BAP1 Regulates Cell Growth via Interaction with HCF-1

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RING Finger and WD Repeat Domain 3 (RFWD3) Associates with Replication Protein A (RPA) and Facilitates RPA-mediated DNA Damage Response

inferredcites →https://doi.org/10.1074/jbc.m111.222869openalex-snapshot

E3 Ligase RFWD3 Participates in Replication Checkpoint Control

inferredcites →https://doi.org/10.1074/jbc.m113.500397openalex-snapshot

Identification of Wilms' Tumor 1-associating Protein Complex and Its Role in Alternative Splicing and the Cell Cycle

inferredcites →https://doi.org/10.1080/01926230600867743openalex-snapshot

Normal Structure, Function, and Histology of the Spleen

inferredcites →https://doi.org/10.1093/beheco/arh104openalex-snapshot

Kinship in colonial tuco-tucos: evidence from group composition and population structure

inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot

edgeR : a Bioconductor package for differential expression analysis of digital gene expression data

inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot

Trimmomatic: a flexible trimmer for Illumina sequence data

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BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

inferredcites →https://doi.org/10.1093/jmammal/gyw078openalex-snapshot

2016 Guidelines of the American Society of Mammalogists for the use of wild mammals in research and education:

inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot

PAML 4: Phylogenetic Analysis by Maximum Likelihood

inferredcites →https://doi.org/10.1093/molbev/msn182openalex-snapshot

Adaptive Evolution in Rodent Seminal Vesicle Secretion Proteins

inferredcites →https://doi.org/10.1093/nar/gki081openalex-snapshot

Rfam: annotating non-coding RNAs in complete genomes

inferredcites →https://doi.org/10.1093/nar/gkl315openalex-snapshot

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

inferredcites →https://doi.org/10.1093/nar/gks042openalex-snapshot

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

inferredcites →https://doi.org/10.1093/nar/gks1116openalex-snapshot

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inferredcites →https://doi.org/10.1093/nar/gks850openalex-snapshot

Characterization of human Spartan/C1orf124, an ubiquitin-PCNA interacting regulator of DNA damage tolerance

inferredcites →https://doi.org/10.1098/rsbl.2005.0354openalex-snapshot

Ancient DNA reveals Holocene loss of genetic diversity in a South American rodent

inferredcites →https://doi.org/10.1101/021626openalex-snapshot

TransRate: reference free quality assessment of de-novo transcriptome assemblies

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Establishing evidenced-based best practice for the de novo assembly and evaluation of transcriptomes from non-model organisms

inferredcites →https://doi.org/10.1101/gr.196469.115openalex-snapshot

TransRate: reference-free quality assessment of de novo transcriptome assemblies

inferredcites →https://doi.org/10.1101/lm.34600openalex-snapshot

Role of Hippocampal Signaling Pathways in Long-Term Memory Formation of a Nonassociative Learning Task in the Rat

inferredcites →https://doi.org/10.1111/j.0014-3820.2002.tb01395.xopenalex-snapshot

ENHANCED SELECTION FOR MHC DIVERSITY IN SOCIAL TUCO-TUCOS

inferredcites →https://doi.org/10.1111/j.1365-2125.2011.04076.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03713.xopenalex-snapshot

Drosophilachemoreceptor gene evolution: selection, specialization and genome size

inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05295.xopenalex-snapshot

Genetic variation over 10 000 years in Ctenomys: comparative phylochronology provides a temporal perspective on rarity, environmental change and demography

inferredcites →https://doi.org/10.1111/j.1440-169x.2009.01088.xopenalex-snapshot

Formation and patterning of the forebrain and olfactory system by zinc‐finger genes Fezf1 and Fezf2

inferredcites →https://doi.org/10.1111/j.1469-7580.2009.01066.xopenalex-snapshot

Structure and functions of keratin proteins in simple, stratified, keratinized and cornified epithelia

inferredcites →https://doi.org/10.1111/j.1538-7836.2005.01365.xopenalex-snapshot

Fibrinogen and fibrin structure and functions

inferredcites →https://doi.org/10.1124/dmd.115.068254openalex-snapshot

Kidney versus Liver Specification of SLC and ABC Drug Transporters, Tight Junction Molecules, and Biomarkers

inferredcites →https://doi.org/10.1126/science.1201711openalex-snapshot

A Family of IFN-γ–Inducible 65-kD GTPases Protects Against Bacterial Infection

inferredcites →https://doi.org/10.1128/iai.73.5.2611-2620.2005openalex-snapshot

Molecular Cloning and Characterization of Three β-Defensins from Canine Testes

inferredcites →https://doi.org/10.1128/mcb.01056-09openalex-snapshot

The UBXN1 Protein Associates with Autoubiquitinated Forms of the BRCA1 Tumor Suppressor and Inhibits Its Enzymatic Function

inferredcites →https://doi.org/10.1128/mcb.01461-07openalex-snapshot

Multivalent Binding of p53 to the STAGA Complex Mediates Coactivator Recruitment after UV Damage

inferredcites →https://doi.org/10.1128/mcb.21.20.6782-6795.2001openalex-snapshot

Human STAGA Complex Is a Chromatin-Acetylating Transcription Coactivator That Interacts with Pre-mRNA Splicing and DNA Damage-Binding Factors In Vivo

inferredcites →https://doi.org/10.1128/mcb.22.6.1734-1741.2002openalex-snapshot

The Regulation of Hypoxic Genes by Calcium Involves c-Jun/AP-1, Which Cooperates with Hypoxia-Inducible Factor 1 in Response to Hypoxia

inferredcites →https://doi.org/10.1139/z06-040openalex-snapshot

Cost of foraging in the subterranean rodentCtenomys talarum: effect of soil hardness

inferredcites →https://doi.org/10.1146/annurev.es.10.110179.001413openalex-snapshot

Adaptive Convergence and Divergence of Subterranean Mammals

inferredcites →https://doi.org/10.1152/ajprenal.00067.2017openalex-snapshot

Severe acute dehydration in a desert rodent elicits a transcriptional response that effectively prevents kidney injury

inferredcites →https://doi.org/10.1152/jn.00005.2017openalex-snapshot

The role of the hippocampus in navigation is memory

inferredcites →https://doi.org/10.1155/2011/809765openalex-snapshot

Role of Positive Selection in Functional Divergence of Mammalian Neuronal Apoptosis Inhibitor Proteins during Evolution

inferredcites →https://doi.org/10.1155/2012/403908openalex-snapshot

Psychological Stress and the Cutaneous Immune Response: Roles of the HPA Axis and the Sympathetic Nervous System in Atopic Dermatitis and Psoriasis

inferredcites →https://doi.org/10.1177/0300985812471543openalex-snapshot

Spontaneous Histologic Lesions of the Adult Naked Mole Rat ( Heterocephalus glaber )

inferredcites →https://doi.org/10.1177/0300985816630796openalex-snapshot

Initial Case Reports of Cancer in Naked Mole-rats ( Heterocephalus glaber )

inferredcites →https://doi.org/10.1177/0300985816646434openalex-snapshot

Regarding Mole Rats and Cancer

inferredcites →https://doi.org/10.1182/blood-2014-11-575357openalex-snapshot

Emerging EPO and EPO receptor regulators and signal transducers

inferredcites →https://doi.org/10.1186/1471-2105-11-485openalex-snapshot

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

inferredcites →https://doi.org/10.1186/1471-2164-15-32openalex-snapshot

Transcriptome sequencing and phylogenomic resolution within Spalacidae (Rodentia)

inferredcites →https://doi.org/10.1186/bcr1769openalex-snapshot

Autocrine WNT signaling contributes to breast cancer cell proliferation via the canonical WNT pathway and EGFR transactivation

inferredcites →https://doi.org/10.1186/s12864-016-2814-zopenalex-snapshot

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Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads

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Follistatin Regulates Germ Cell Nest Breakdown and Primordial Follicle Formation

inferredcites →https://doi.org/10.1242/jeb.037887openalex-snapshot

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inferredcites →https://doi.org/10.12688/f1000research.6924.1openalex-snapshot

The khmer software package: enabling efficient nucleotide sequence analysis

inferredcites →https://doi.org/10.1371/journal.pcbi.1004772openalex-snapshot

BinPacker: Packing-Based De Novo Transcriptome Assembly from RNA-seq Data

inferredcites →https://doi.org/10.1371/journal.pgen.1000144openalex-snapshot

Patterns of Positive Selection in Six Mammalian Genomes

inferredcites →https://doi.org/10.1371/journal.pone.0021227openalex-snapshot

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inferredcites →https://doi.org/10.1371/journal.pone.0036372openalex-snapshot

Mechanism of Cancer Cell Death Induced by Depletion of an Essential Replication Regulator

inferredcites →https://doi.org/10.1371/journal.pone.0037918openalex-snapshot

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inferredcites →https://doi.org/10.1371/journal.pone.0045524openalex-snapshot

The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis)

inferredcites →https://doi.org/10.1371/journal.pone.0068206openalex-snapshot

The Metastasis Suppressor, N-myc Downregulated Gene 1 (NDRG1), Is a Prognostic Biomarker for Human Colorectal Cancer

inferredcites →https://doi.org/10.1371/journal.pone.0111315openalex-snapshot

Emissions from Pre-Hispanic Metallurgy in the South American Atmosphere

inferredcites →https://doi.org/10.1371/journal.pone.0120781openalex-snapshot

αII-Spectrin Regulates Invadosome Stability and Extracellular Matrix Degradation

inferredcites →https://doi.org/10.1523/jneurosci.21-18-07153.2001openalex-snapshot

Astrocytes Give Rise to New Neurons in the Adult Mammalian Hippocampus

inferredcites →https://doi.org/10.1523/jneurosci.5176-03.2004openalex-snapshot

Carbonic Anhydrase Isoform VII Acts as a Molecular Switch in the Development of Synchronous Gamma-Frequency Firing of Hippocampal CA1 Pyramidal Cells

inferredcites →https://doi.org/10.1593/neo.08216openalex-snapshot

Cdc7-Dbf4 Kinase Overexpression in Multiple Cancers and Tumor Cell Lines Is Correlated with p53 Inactivation

inferredcites →https://doi.org/10.1644/11-mamm-a-266.1openalex-snapshot

Habitat use by colonial tuco-tucos (Ctenomys sociabilis): specialization, variation, and sociality

inferredcites →https://doi.org/10.1644/bwg-222.1openalex-snapshot

DAILY ACTIVITY PATTERNS OF FREE-LIVING CURUROS (SPALACOPUS CYANUS)

inferredcites →https://doi.org/10.18632/oncotarget.5109openalex-snapshot

Defensins versus pathogens: an unfolding story

inferredcites →https://doi.org/10.2174/138161211797052457openalex-snapshot

Walking the Oxidative Stress Tightrope: A Perspective from the Naked Mole-Rat, the Longest-Living Rodent

inferredcites →https://doi.org/10.2307/1223169openalex-snapshot

Mammal Species of the World: A Taxonomic and Geographic Reference

inferredcites →https://doi.org/10.2307/1382907openalex-snapshot

Burrow Sharing by Colonial Tuco-Tucos (Ctenomys sociabilis)

inferredcites →https://doi.org/10.3102/10769986025001060openalex-snapshot

On the Adaptive Control of the False Discovery Rate in Multiple Testing With Independent Statistics

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UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets

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R: A Language and Environment for Statistical Computing

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On the optimal trimming of high-throughput mRNA sequence data

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Assembly, Assessment, and Availability of De novo Generated Eukaryotic Transcriptomes

inferredcites →https://doi.org/10.3389/fonc.2016.00034openalex-snapshot

Che-1/AATF: A Critical Cofactor for Both Wild-Type- and Mutant-p53 Proteins

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SPAG9 expression is increased in human prostate cancer and promotes cell motility, invasion and angiogenesis in vitro

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Sperm-Associated Antigen 9 is a Promising marker for Early Diagnosis of Endometrial Cancer

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Subterranean mammals show convergent regression in ocular genes and enhancers, along with adaptation to tunneling

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Characterizing the adult and larval transcriptome of the multicolored Asian lady beetle, Harmonia axyridis

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Characterization of a male reproductive transcriptome for Peromyscus eremicus (Cactus mouse)

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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-3-030-65606-5_13openalex-snapshot

Conservation Genetics of Rodents in Argentina

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.