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Network hubs in root-associated fungal metacommunities

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/jobm.200800328openalex-snapshot

Diversity of endophytic yeasts from sweet orange and their localization by scanning electron microscopy

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Biological Control of Fusarium Crown and Root Rot of Tomato in Florida Using Trichoderma harzianum and Glomus intraradices

inferredcites →https://doi.org/10.1007/s00248-008-9457-9openalex-snapshot

Evidence of Symbiosis Between the Soil Yeast Cryptococcus laurentii and a Sclerophyllous Medicinal Shrub, Agathosma betulina (Berg.) Pillans

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Interactions between arbuscular mycorrhizal fungi and phosphate-solubilizing fungus (Mortierella sp.) and their effects on Kostelelzkya virginica growth and enzyme activities of rhizosphere and bulk soils at different salinities

inferredcites →https://doi.org/10.1007/s00572-004-0314-5openalex-snapshot

Red list plants: colonization by arbuscular mycorrhizal fungi and dark septate endophytes

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Formation of structures resembling ericoid mycorrhizas by the root endophytic fungus Heteroconium chaetospira within roots of Rhododendron obtusum var. kaempferi

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Dark septate endophytes - are they mycorrhizal?

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Isolation and biological activities of an endophytic Mortierella alpina strain from the Antarctic moss Schistidium antarctici

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A review of the phylogeny and biology of the Diaporthales

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Heteroconium chaetospira, a dark septate root endophyte allied to the Herpotrichiellaceae (Chaetothyriales) obtained from some forest soil samples in Canada using bait plants

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Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms

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Agricultural uses of plant biostimulants

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The Co-occurrence and Morphological Continuum Between Ericoid Mycorrhiza and Dark Septate Endophytes in Roots of Six European Rhododendron Species

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Antibiosis, mycoparasitism, and colonization success for endophytic Trichoderma isolates with biological control potential in Theobroma cacao

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Root Endophyte Colletotrichum tofieldiae Confers Plant Fitness Benefits that Are Phosphate Status Dependent

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Endophytic fungi in forest trees: are they mutualists?

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The development and endophytic nature of the fungusHeteroconium chaetospira

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Diversity of and yeasts (Basidiomycota) inhabiting arbuscular mycorrhizal roots or spores

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Plant growth-promoting traits of epiphytic and endophytic yeasts isolated from rice and sugar cane leaves in Thailand

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The cultivable endophytic community of Norway spruce ectomycorrhizas from microhabitats lacking ericaceous hosts is dominated by ericoid mycorrhizal Meliniomyces variabilis

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Network perspectives of ectomycorrhizal associations

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FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

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Towards an integrated phylogenetic classification of the Tremellomycetes

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The rhizosphere microbiome and plant health

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Cryptosporiopsis radicicola sp. nov. from roots of Quercus robur

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Biologically active secondary metabolites of endophytic Pezicula species

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Parasitism of non-host plants by the mycorrhizal fungus Tuber melanosporum

inferredcites →https://doi.org/10.1023/a:1014429527591openalex-snapshot

Effect of lipids from Mortierella hygrophila on plant resistance to phytopathogens

inferredcites →https://doi.org/10.1038/23932openalex-snapshot

Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity

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Error and attack tolerance of complex networks

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Large-scale forest girdling shows that current photosynthesis drives soil respiration

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Structural asymmetry and the stability of diverse food webs

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Defining the core Arabidopsis thaliana root microbiome

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Functional overlap of the Arabidopsis leaf and root microbiota

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Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

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Assembly of complex plant–fungus networks

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DADA2: High-resolution sample inference from Illumina amplicon data

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Dimensions of biodiversity in the Earth mycobiome

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Microbial biogeography: putting microorganisms on the map

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Microbial interactions: from networks to models

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Species-rich networks and eco-evolutionary synthesis at the metacommunity level

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Mycorrhizal fungi mediate the direction and strength of plant–soil feedbacks differently between arbuscular mycorrhizal and ectomycorrhizal communities

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Suppression of clubroot formation in Chinese cabbage by the root endophytic fungus, Heteroconium chaetospira

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Clonality and long‐distance migration of Puccinia striiformis f.sp. tritici in north‐west Europe

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The influence of arbuscular mycorrhizae on the relationship between plant diversity and productivity

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Dark septate endophytes: a review of facultative biotrophic root‐colonizing fungi

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Vesicular–arbuscular mycorrhizal infection of Quercus rubra seedlings

inferredcites →https://doi.org/10.1046/j.1469-8137.2002.00417.xopenalex-snapshot

Extramatrical ectomycorrhizal mycelium contributes one‐third of microbial biomass and produces, together with associated roots, half the dissolved organic carbon in a forest soil

inferredcites →https://doi.org/10.1073/pnas.0504423102openalex-snapshot

The endophytic fungus Piriformospora indica reprograms barley to salt-stress tolerance, disease resistance, and higher yield

inferredcites →https://doi.org/10.1073/pnas.1402584111openalex-snapshot

Endemism and functional convergence across the North American soil mycobiome

inferredcites →https://doi.org/10.1073/pnas.1414592112openalex-snapshot

Structure, variation, and assembly of the root-associated microbiomes of rice

inferredcites →https://doi.org/10.1073/pnas.1710455114openalex-snapshot

Root-associated fungal microbiota of nonmycorrhizal Arabis alpina and its contribution to plant phosphorus nutrition

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Fungal endophytes limit pathogen damage in a tropical tree

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Food Web Complexity and Species Diversity

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Mutualism in Metapopulations of Legumes and Rhizobia

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Synchrony and Stability of Food Webs in Metacommunities

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Networks: An Introduction

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Drivers of yeast community composition in the litter and soil of a temperate forest

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Elicitors from the endophytic fungus Trichoderma atroviride promote Salvia miltiorrhiza hairy root growth and tanshinone biosynthesis

inferredcites →https://doi.org/10.1094/mpmi-09-10-0221openalex-snapshot

Endophytic Trichoderma Isolates from Tropical Environments Delay Disease Onset and Induce Resistance Against Phytophthora capsici in Hot Pepper Using Multiple Mechanisms

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The Plant Microbiome at Work

inferredcites →https://doi.org/10.1098/rsif.2015.1097openalex-snapshot

Network modules and hubs in plant-root fungal biomes

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Cryptocandin, a potent antimycotic from the endophytic fungus Cryptosporiopsis cf. quercina

inferredcites →https://doi.org/10.1101/269563openalex-snapshot

Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant—fungus networks

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MEGAN analysis of metagenomic data

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Role of niche restrictions and dispersal in the composition of arbuscular mycorrhizal fungal communities

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Measuring ectomycorrhizal fungal dispersal: macroecological patterns driven by microscopic propagules

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First Report of Root Rot Caused by Ilyonectria (=Neonectria) macrodidyma on Avocado (Persea americana) in Italy

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A new method for non‐parametric multivariate analysis of variance

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The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

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‘ Everything is everywhere , but, the environment selects ’; what did Baas Becking and Beijerinck really say?

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Ascomycetes associated with ectomycorrhizas: molecular diversity and ecology with particular reference to the Helotiales

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OIDIODENDRON GRISEUM ROBAK: AN ENDOPHYTE OF ERICOID MYCORRHIZA IN VACCINIUM SPP.

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THE STRUCTURE AND FUNCTION OF THE VEGETATIVE MYCELIUM OF ECTOMYCORRHIZAL PLANTS

inferredcites →https://doi.org/10.1111/j.1469-8137.2005.01545.xopenalex-snapshot

Ectomycorrhizal networks and seedling establishment during early primary succession

inferredcites →https://doi.org/10.1111/j.1469-8137.2009.03003.xopenalex-snapshot

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

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The online database Maarj AM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota)

inferredcites →https://doi.org/10.1111/j.1469-8137.2010.03611.xopenalex-snapshot

A meta‐analysis of plant responses to dark septate root endophytes

inferredcites →https://doi.org/10.1111/j.1469-8137.2012.04163.xopenalex-snapshot

On the application of network theory to arbuscular mycorrhizal fungi–plant interactions: the importance of basic assumptions

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Distance‐Based Tests for Homogeneity of Multivariate Dispersions

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Effects of inoculation with plant growth-promoting rhizobacteria on resident rhizosphere microorganisms

inferredcites →https://doi.org/10.1111/j.1756-1051.2001.tb00793.xopenalex-snapshot

Long‐distance spore dispersal in wood‐inhabiting Basidiomycetes

inferredcites →https://doi.org/10.1111/mec.12481openalex-snapshot

Towards a unified paradigm for sequence‐based identification of fungi

inferredcites →https://doi.org/10.1111/mec.13655openalex-snapshot

Sequence variation in nuclear ribosomal small subunit, internal transcribed spacer and large subunit regions of Rhizophagus irregularis and Gigaspora margarita is high and isolate‐dependent

inferredcites →https://doi.org/10.1111/mec.13680openalex-snapshot

Ericaceous plant–fungus network in a harsh alpine–subalpine environment

inferredcites →https://doi.org/10.1111/ppa.12059openalex-snapshot

Co‐infection by B otryosphaeriaceae and I lyonectria spp. fungi during propagation causes decline of young grafted grapevines

inferredcites →https://doi.org/10.1126/sciadv.1500291openalex-snapshot

Below-ground plant–fungus network topology is not congruent with above-ground plant–animal network topology

inferredcites →https://doi.org/10.1126/science.1072678openalex-snapshot

Aerial Dispersal of Pathogens on the Global and Continental Scales and Its Impact on Plant Disease

inferredcites →https://doi.org/10.1126/science.1080070openalex-snapshot

Evolution of Virulence in a Plant Host-Pathogen Metapopulation

inferredcites →https://doi.org/10.1126/science.1094875openalex-snapshot

Ecological Linkages Between Aboveground and Belowground Biota

inferredcites →https://doi.org/10.1126/science.1253621openalex-snapshot

Ecological and evolutionary effects of fragmentation on infectious disease dynamics

inferredcites →https://doi.org/10.1126/science.1256688openalex-snapshot

Global diversity and geography of soil fungi

inferredcites →https://doi.org/10.1128/aem.71.9.5544-5550.2005openalex-snapshot

Fungal Community Analysis by Large-Scale Sequencing of Environmental Samples

inferredcites →https://doi.org/10.1139/b04-171openalex-snapshot

Microfungal endophytes in roots

inferredcites →https://doi.org/10.1139/b07-086openalex-snapshot

Cryptosporiopsisspecies isolated from the roots of aspen in central Alberta: identification, morphology, and interactions with the host, in vitroThis article is one of a selection of papers published in the Special Issue on Poplar Research in Canada.

inferredcites →https://doi.org/10.1139/b98-098openalex-snapshot

Performance of Pinus contorta inoculated with two strains of root endophytic fungus, Phialocephala fortinii: effects of synthesis system and glucose concentration

inferredcites →https://doi.org/10.1139/cjb-76-7-1205openalex-snapshot

Performance of Pinus contorta inoculated with two strains of root endophytic fungus, Phialocephala fortinii: effects of synthesis system and glucose concentration

inferredcites →https://doi.org/10.1139/m94-084openalex-snapshot

Failure of inoculant rhizobia to overcome the dominance of indigenous strains for nodule formation

inferredcites →https://doi.org/10.1146/annurev-phyto-080508-081831openalex-snapshot

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

inferredcites →https://doi.org/10.1146/annurev.phyto.23.1.23openalex-snapshot

Trichoderma and Gliocladium: Biology, Ecology, and Potential for Biocontrol

inferredcites →https://doi.org/10.1146/annurev.py.28.090190.001035openalex-snapshot

Long-Distance Dispersion of Rust Pathogens

inferredcites →https://doi.org/10.1186/1472-6785-6-9openalex-snapshot

Measuring specialization in species interaction networks.

inferredcites →https://doi.org/10.1186/s40168-016-0220-zopenalex-snapshot

Deciphering composition and function of the root microbiome of a legume plant

inferredcites →https://doi.org/10.1201/ebk1439804193openalex-snapshot

Pictorial Atlas of Soil and Seed Fungi

inferredcites →https://doi.org/10.1371/journal.pbio.1002352openalex-snapshot

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

inferredcites →https://doi.org/10.1371/journal.pbio.2001793openalex-snapshot

Research priorities for harnessing plant microbiomes in sustainable agriculture

inferredcites →https://doi.org/10.1371/journal.pcbi.1004226openalex-snapshot

Sparse and Compositionally Robust Inference of Microbial Ecological Networks

inferredcites →https://doi.org/10.1371/journal.pone.0040863openalex-snapshot

High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

inferredcites →https://doi.org/10.1371/journal.pone.0076910openalex-snapshot

Two New Computational Methods for Universal DNA Barcoding: A Benchmark Using Barcode Sequences of Bacteria, Archaea, Animals, Fungi, and Land Plants

inferredcites →https://doi.org/10.1371/journal.pone.0083241openalex-snapshot

Arbuscular Mycorrhizal Fungal Networks Vary throughout the Growing Season and between Successional Stages

inferredcites →https://doi.org/10.1371/journal.pone.0090234openalex-snapshot

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

inferredcites →https://doi.org/10.1371/journal.pone.0098679openalex-snapshot

ForceAtlas2, a Continuous Graph Layout Algorithm for Handy Network Visualization Designed for the Gephi Software

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Lineages in Nectriaceae : re-evaluating the generic status of Ilyonectria and allied genera

inferredcites →https://doi.org/10.1609/icwsm.v3i1.13937openalex-snapshot

Gephi: An Open Source Software for Exploring and Manipulating Networks

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Loss of foundation species: consequences for the structure and dynamics of forested ecosystems

inferredcites →https://doi.org/10.1890/es10-00117.1openalex-snapshot

Using null models to disentangle variation in community dissimilarity from variation in α-diversity

inferredcites →https://doi.org/10.2307/3033543openalex-snapshot

A Set of Measures of Centrality Based on Betweenness

inferredcites →https://doi.org/10.3114/sim.53.1.173openalex-snapshot

Seeking the elusive function of the root-colonising dark septate endophytic fungi

inferredcites →https://doi.org/10.3114/sim.53.1.53openalex-snapshot

Two new Cryptosporiopsis species from roots of ericaceous hosts in western North America

inferredcites →https://doi.org/10.3114/sim.53.1.83openalex-snapshot

Oidiodendron: A survey of the named species and related anamorphs of Myxotrichum

inferredcites →https://doi.org/10.3852/mycologia.99.2.175openalex-snapshot

A mutualistic symbiosis between a dark septate endophytic fungus, Heteroconium chaetospira, and a nonmycorrhizal plant, Chinese cabbage

inferredcites →https://doi.org/10.5860/choice.43-2194openalex-snapshot

The geographic mosaic of coevolution

inferredcites →https://doi.org/10.7208/chicago/9780226118697.001.0001openalex-snapshot

The Geographic Mosaic of Coevolution

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s11427-022-2174-3openalex-snapshot

Plant and fungal species interactions differ between aboveground and belowground habitats in mountain forests of eastern China

inferred← citeshttps://doi.org/10.1016/j.scienta.2021.110835openalex-snapshot

Prospecting the unpredicted potential traits of Cladophialophora chaetospira SK51 to alter photoperiodic flowering in strawberry, a perennial SD plant

inferred← citeshttps://doi.org/10.1038/s41598-025-96810-0openalex-snapshot

Fungal diversity and network analysis in rhizosphere soil of Atractylodes macrocephala across different cultivation regions

inferred← citeshttps://doi.org/10.1111/nph.19235openalex-snapshot

Diversity and biogeography of plant phyllosphere bacteria are governed by latitude‐dependent mechanisms

inferred← citeshttps://doi.org/10.15666/aeer/1806_75157533openalex-snapshot

TEMPORAL VARIATION GOVERNS THE PROLIFERATION OF DIFFERENT TAXA OR GUILDS OF ULTRAPLANKTONIC FUNGI IN A LARGE RESERVOIR

inferred← citeshttps://doi.org/10.3389/fmicb.2021.713180openalex-snapshot

Synergistic and Offset Effects of Fungal Species Combinations on Plant Performance

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