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Classification of breast tumours into molecular apocrine, luminal and basal groups based on an explicit biological model

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.cell.2005.05.008openalex-snapshot
Chromosome-Wide Mapping of Estrogen Receptor Binding Reveals Long-Range Regulation Requiring the Forkhead Protein FoxA1
inferredcites →https://doi.org/10.1016/j.cell.2017.11.010openalex-snapshot
A Living Biobank of Breast Cancer Organoids Captures Disease Heterogeneity
inferredcites →https://doi.org/10.1016/j.celrep.2017.02.071openalex-snapshot
Lineage-Biased Stem Cells Maintain Estrogen-Receptor-Positive and -Negative Mouse Mammary Luminal Lineages
inferredcites →https://doi.org/10.1016/j.celrep.2017.07.066openalex-snapshot
Lineage-Restricted Mammary Stem Cells Sustain the Development, Homeostasis, and Regeneration of the Estrogen Receptor Positive Lineage
inferredcites →https://doi.org/10.1016/s1470-2045(10)70176-5openalex-snapshot
Clinical implementation of the intrinsic subtypes of breast cancer
inferredcites →https://doi.org/10.1016/s1470-2045(11)70094-8openalex-snapshot
TP53 status for prediction of sensitivity to taxane versus non-taxane neoadjuvant chemotherapy in breast cancer (EORTC 10994/BIG 1-00): a randomised phase 3 trial
inferredcites →https://doi.org/10.1038/35021093openalex-snapshot
Molecular portraits of human breast tumours
inferredcites →https://doi.org/10.1038/382360a0openalex-snapshot
The mouse Engrailed-1 gene and ventral limb patterning
inferredcites →https://doi.org/10.1038/emboj.2011.216openalex-snapshot
Androgen receptor driven transcription in molecular apocrine breast cancer is mediated by FoxA1
inferredcites →https://doi.org/10.1038/labinvest.2017.106openalex-snapshot
Lobular carcinoma in situ and invasive lobular breast cancer are characterized by enhanced expression of transcription factor AP-2β
inferredcites →https://doi.org/10.1038/nature11412openalex-snapshot
Comprehensive molecular portraits of human breast tumours
inferredcites →https://doi.org/10.1038/nature14665openalex-snapshot
Reactivation of multipotency by oncogenic PIK3CA induces breast tumour heterogeneity
inferredcites →https://doi.org/10.1038/nature14669openalex-snapshot
PIK3CAH1047R induces multipotency and multi-lineage mammary tumours
inferredcites →https://doi.org/10.1038/nbt.3015openalex-snapshot
The devil in the details of RNA-seq
inferredcites →https://doi.org/10.1038/ncb1530openalex-snapshot
Gata-3 is an essential regulator of mammary-gland morphogenesis and luminal-cell differentiation
inferredcites →https://doi.org/10.1038/ncomms5011openalex-snapshot
De novo SOX11 mutations cause Coffin–Siris syndrome
inferredcites →https://doi.org/10.1038/ncomms6987openalex-snapshot
BCL11A is a triple-negative breast cancer gene with critical functions in stem and progenitor cells
inferredcites →https://doi.org/10.1038/nm.1908openalex-snapshot
A stroma-related gene signature predicts resistance to neoadjuvant chemotherapy in breast cancer
inferredcites →https://doi.org/10.1038/nm.2000openalex-snapshot
Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers
inferredcites →https://doi.org/10.1038/nm1756openalex-snapshot
SUMOylation of Krüppel-like transcription factor 5 acts as a molecular switch in transcriptional programs of lipid metabolism involving PPAR-δ
inferredcites →https://doi.org/10.1038/nrclinonc.2011.125openalex-snapshot
Challenges translating breast cancer gene signatures into the clinic
inferredcites →https://doi.org/10.1038/onc.2011.301openalex-snapshot
A refined molecular taxonomy of breast cancer
inferredcites →https://doi.org/10.1038/sj.emboj.7600538openalex-snapshot
Elf5 is essential for early embryogenesis and mammary gland development during pregnancy and lactation
inferredcites →https://doi.org/10.1038/sj.onc.1208561openalex-snapshot
Identification of molecular apocrine breast tumours by microarray analysis
inferredcites →https://doi.org/10.1038/sj.onc.1209415openalex-snapshot
An estrogen receptor-negative breast cancer subset characterized by a hormonally regulated transcriptional program and response to androgen
inferredcites →https://doi.org/10.1056/nejmra023246openalex-snapshot
Aromatase Inhibitors in Breast Cancer
inferredcites →https://doi.org/10.1073/pnas.0510974103openalex-snapshot
Paracrine signaling through the epithelial estrogen receptor α is required for proliferation and morphogenesis in the mammary gland
inferredcites →https://doi.org/10.1073/pnas.0909114106openalex-snapshot
Recurrent fusion of MYB and NFIB transcription factor genes in carcinomas of the breast and head and neck
inferredcites →https://doi.org/10.1073/pnas.0932692100openalex-snapshot
Repeated observation of breast tumor subtypes in independent gene expression data sets
inferredcites →https://doi.org/10.1073/pnas.191367098openalex-snapshot
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
inferredcites →https://doi.org/10.1073/pnas.95.25.14863openalex-snapshot
Cluster analysis and display of genome-wide expression patterns
inferredcites →https://doi.org/10.1093/annonc/mdw067openalex-snapshot
A phase II trial of abiraterone acetate plus prednisone in patients with triple-negative androgen receptor positive locally advanced or metastatic breast cancer (UCBG 12-1)
inferredcites →https://doi.org/10.1093/bioinformatics/btg405openalex-snapshot
affy—analysis of Affymetrix GeneChip data at the probe level
inferredcites →https://doi.org/10.1093/bioinformatics/bth078openalex-snapshot
Open source clustering software
inferredcites →https://doi.org/10.1093/bioinformatics/bth349openalex-snapshot
Java Treeview—extensible visualization of microarray data
inferredcites →https://doi.org/10.1093/biostatistics/kxj037openalex-snapshot
Adjusting batch effects in microarray expression data using empirical Bayes methods
inferredcites →https://doi.org/10.1093/jnci/djr071openalex-snapshot
Microarray-Based Class Discovery for Molecular Classification of Breast Cancer: Analysis of Interobserver Agreement
inferredcites →https://doi.org/10.1101/gad.1614608openalex-snapshot
The Ets transcription factor Elf5 specifies mammary alveolar cell fate
inferredcites →https://doi.org/10.1158/1078-0432.ccr-12-3327openalex-snapshot
Phase II Trial of Bicalutamide in Patients with Androgen Receptor–Positive, Estrogen Receptor–Negative Metastatic Breast Cancer
inferredcites →https://doi.org/10.1158/1078-0432.ccr-14-0432openalex-snapshot
Comprehensive Genomic Analysis Identifies Novel Subtypes and Targets of Triple-Negative Breast Cancer
inferredcites →https://doi.org/10.1172/jci45014openalex-snapshot
Identification of human triple-negative breast cancer subtypes and preclinical models for selection of targeted therapies
inferredcites →https://doi.org/10.1186/1471-2164-9-591openalex-snapshot
Transcriptome analysis of mammary epithelial subpopulations identifies novel determinants of lineage commitment and cell fate
inferredcites →https://doi.org/10.1186/bcr2635openalex-snapshot
Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer
inferredcites →https://doi.org/10.1186/bcr3421openalex-snapshot
Molecular apocrine breast cancers are aggressive estrogen receptor negative tumors overexpressing either HER2 or GCDFP15
inferredcites →https://doi.org/10.1186/bcr79openalex-snapshot
Estrogen receptor transcription and transactivation Estrogen receptor knockout mice: what their phenotypes reveal about mechanisms of estrogen action
inferredcites →https://doi.org/10.1186/gb-2007-8-5-r76openalex-snapshot
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors
inferredcites →https://doi.org/10.1186/s12885-015-1018-2openalex-snapshot
TOX3 is expressed in mammary ER+ epithelial cells and regulates ER target genes in luminal breast cancer
inferredcites →https://doi.org/10.1186/s13058-014-0504-9openalex-snapshot
Humanization of the mouse mammary gland by replacement of the luminal layer with genetically-engineered preneoplastic human cells
inferredcites →https://doi.org/10.1186/s13058-015-0520-4openalex-snapshot
Molecular subtyping for clinically defined breast cancer subgroups
inferredcites →https://doi.org/10.1186/s13058-018-0933-yopenalex-snapshot
HER2 is not a cancer subtype but rather a pan-cancer event and is highly enriched in AR-driven breast tumors
inferredcites →https://doi.org/10.1200/jco.2008.18.1370openalex-snapshot
Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes
inferredcites →https://doi.org/10.1200/jco.2016.71.3495openalex-snapshot
Enzalutamide for the Treatment of Androgen Receptor–Expressing Triple-Negative Breast Cancer
inferredcites →https://doi.org/10.1210/me.2012-1107openalex-snapshot
Minireview: The Androgen Receptor in Breast Tissues: Growth Inhibitor, Tumor Suppressor, Oncogene?
inferredcites →https://doi.org/10.1242/dev.126.21.4807openalex-snapshot
TONDU (TDU), a novel human protein related to the product of vestigial (vg) gene of Drosophila melanogaster interacts with vertebrate TEF factors and substitutes for Vg function in wing formation
inferredcites →https://doi.org/10.1371/journal.pbio.1001461openalex-snapshot
ELF5 Suppresses Estrogen Sensitivity and Underpins the Acquisition of Antiestrogen Resistance in Luminal Breast Cancer
inferredcites →https://doi.org/10.1371/journal.pbio.1002069openalex-snapshot
Luminal Progenitors Restrict Their Lineage Potential during Mammary Gland Development
inferredcites →https://doi.org/10.1371/journal.pgen.0020112openalex-snapshot
Signalling Pathways Implicated in Early Mammary Gland Morphogenesis and Breast Cancer

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-3-031-70875-6_11openalex-snapshot
Classification of Breast Cancer Through the Perspective of Cell Identity Models
inferred← citeshttps://doi.org/10.1016/s1470-2045(24)00737-xopenalex-snapshot
Darolutamide or capecitabine in triple-negative, androgen receptor-positive, advanced breast cancer (UCBG 3-06 START): a multicentre, non-comparative, randomised, phase 2 trial
inferred← citeshttps://doi.org/10.1038/s41416-019-0420-yopenalex-snapshot
Molecular apocrine tumours in EORTC 10994/BIG 1-00 phase III study: pathological response after neoadjuvant chemotherapy and clinical outcomes
inferred← citeshttps://doi.org/10.1109/tcbb.2019.2911074openalex-snapshot
A Network-Based Comparison Between Molecular Apocrine Breast Cancer Tumor and Basal and Luminal Tumors by Joint Graphical Lasso
inferred← citeshttps://doi.org/10.1186/s13059-023-03161-yopenalex-snapshot
The androgen receptor interacts with GATA3 to transcriptionally regulate a luminal epithelial cell phenotype in breast cancer
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