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Positional information encoded in the dynamic differences between neighbouring oscillators during vertebrate segmentation

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/dvdy.21458openalex-snapshot

Dynamics of zebrafish somitogenesis

inferredcites →https://doi.org/10.1002/jez.b.21305openalex-snapshot

Developmental control of segment numbers in vertebrates

inferredcites →https://doi.org/10.1016/j.cell.2016.01.028openalex-snapshot

Self-Organization of Embryonic Genetic Oscillators into Spatiotemporal Wave Patterns

inferredcites →https://doi.org/10.1016/j.cell.2018.01.026openalex-snapshot

Modulation of Phase Shift between Wnt and Notch Signaling Oscillations Controls Mesoderm Segmentation

inferredcites →https://doi.org/10.1016/j.celrep.2016.11.069openalex-snapshot

Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche

inferredcites →https://doi.org/10.1016/j.celrep.2018.06.023openalex-snapshot

Spatial Fold Change of FGF Signaling Encodes Positional Information for Segmental Determination in Zebrafish

inferredcites →https://doi.org/10.1016/j.devcel.2007.07.013openalex-snapshot

The Initiation and Propagation of Hes7 Oscillation Are Cooperatively Regulated by Fgf and Notch Signaling in the Somite Segmentation Clock

inferredcites →https://doi.org/10.1016/j.devcel.2012.09.009openalex-snapshot

Single-Cell-Resolution Imaging of the Impact of Notch Signaling and Mitosis on Segmentation Clock Dynamics

inferredcites →https://doi.org/10.1016/j.pbiomolbio.2018.04.004openalex-snapshot

Travelling waves in somitogenesis: Collective cellular properties emerge from time-delayed juxtacrine oscillation coupling

inferredcites →https://doi.org/10.1016/j.ydbio.2009.02.035openalex-snapshot

Interfering with Wnt signalling alters the periodicity of the segmentation clock

inferredcites →https://doi.org/10.1016/s0022-5193(69)80016-0openalex-snapshot

Positional information and the spatial pattern of cellular differentiation

inferredcites →https://doi.org/10.1016/s0022-5193(69)80017-2openalex-snapshot

A phase-shift model for the spatial and temporal organization of developing systems

inferredcites →https://doi.org/10.1016/s0022-5193(76)80131-2openalex-snapshot

A clock and wavefront model for control of the number of repeated structures during animal morphogenesis

inferredcites →https://doi.org/10.1016/s0092-8674(00)80451-1openalex-snapshot

Avian hairy Gene Expression Identifies a Molecular Clock Linked to Vertebrate Segmentation and Somitogenesis

inferredcites →https://doi.org/10.1016/s0092-8674(01)00437-8openalex-snapshot

FGF Signaling Controls Somite Boundary Position and Regulates Segmentation Clock Control of Spatiotemporal Hox Gene Activation

inferredcites →https://doi.org/10.1016/s0925-4773(99)00039-8openalex-snapshot

Heat shock produces periodic somitic disturbances in the zebrafish embryo

inferredcites →https://doi.org/10.1016/s0960-9822(03)00534-7openalex-snapshot

Autoinhibition with Transcriptional Delay

inferredcites →https://doi.org/10.1016/s0960-9822(07)00424-1openalex-snapshot

Waves of mouse Lunatic fringe expression, in four-hour cycles at two-hour intervals, precede somite boundary formation

inferredcites →https://doi.org/10.1016/s0960-9822(98)70401-4openalex-snapshot

The lunatic Fringe gene is a target of the molecular clock linked to somite segmentation in avian embryos

inferredcites →https://doi.org/10.1016/s1534-5807(03)00055-8openalex-snapshot

Wnt3a Plays a Major Role in the Segmentation Clock Controlling Somitogenesis

inferredcites →https://doi.org/10.1038/254196a0openalex-snapshot

Control of somite number during morphogenesis of a vertebrate, Xenopus laevis

inferredcites →https://doi.org/10.1038/35044091openalex-snapshot

Notch signalling and the synchronization of the somite segmentation clock

inferredcites →https://doi.org/10.1038/78062openalex-snapshot

Mesp2 initiates somite segmentation through the Notch signalling pathway

inferredcites →https://doi.org/10.1038/nature02216openalex-snapshot

fgf8 mRNA decay establishes a gradient that couples axial elongation to patterning in the vertebrate embryo

inferredcites →https://doi.org/10.1038/nature03591openalex-snapshot

The Mesp2 transcription factor establishes segmental borders by suppressing Notch activity

inferredcites →https://doi.org/10.1038/nature07020openalex-snapshot

Control of segment number in vertebrate embryos

inferredcites →https://doi.org/10.1038/nature11804openalex-snapshot

Scaling of embryonic patterning based on phase-gradient encoding

inferredcites →https://doi.org/10.1073/pnas.0508238103openalex-snapshot

Tbx6-mediated Notch signaling controls somite-specific Mesp2 expression

inferredcites →https://doi.org/10.1073/pnas.0508658103openalex-snapshot

Real-time imaging of the somite segmentation clock: Revelation of unstable oscillators in the individual presomitic mesoderm cells

inferredcites →https://doi.org/10.1073/pnas.1007417108openalex-snapshot

FGF4 and FGF8 comprise the wavefront activity that controls somitogenesis

inferredcites →https://doi.org/10.1088/1367-2630/17/9/093042openalex-snapshot

Continuum theory of gene expression waves during vertebrate segmentation

inferredcites →https://doi.org/10.1088/1478-3975/13/3/036009openalex-snapshot

Positional information from oscillatory phase shifts : insights fromin silicoevolution

inferredcites →https://doi.org/10.1088/1478-3975/13/5/05lt03openalex-snapshot

Sequential pattern formation governed by signaling gradients

inferredcites →https://doi.org/10.1101/gad.1291205openalex-snapshot

Zebrafish Hairy/Enhancer of split protein links FGF signaling to cyclic gene expression in the periodic segmentation of somites

inferredcites →https://doi.org/10.1101/gad.270785.115openalex-snapshot

Oscillatory control of Delta-like1 in cell interactions regulates dynamic gene expression and tissue morphogenesis

inferredcites →https://doi.org/10.1101/gad.930601openalex-snapshot

Dynamic expression and essential functions of Hes7 in somite segmentation

inferredcites →https://doi.org/10.1119/1.1349543openalex-snapshot

Pendulum waves: A lesson in aliasing

inferredcites →https://doi.org/10.1119/1.16608openalex-snapshot

Pendulum waves: A demonstration of wave motion using pendula

inferredcites →https://doi.org/10.1126/science.1074560openalex-snapshot

Oscillatory Expression of the bHLH Factor Hes1 Regulated by a Negative Feedback Loop

inferredcites →https://doi.org/10.1126/science.1133141openalex-snapshot

A Complex Oscillating Network of Signaling Genes Underlies the Mouse Segmentation Clock

inferredcites →https://doi.org/10.1126/science.1142538openalex-snapshot

Synchrony Dynamics During Initiation, Failure, and Rescue of the Segmentation Clock

inferredcites →https://doi.org/10.1126/science.1253089openalex-snapshot

A Doppler effect in embryonic pattern formation

inferredcites →https://doi.org/10.1242/dev.000786openalex-snapshot

The Hes gene family: repressors and oscillators that orchestrate embryogenesis

inferredcites →https://doi.org/10.1242/dev.063610openalex-snapshot

Notch signaling: simplicity in design, versatility in function

inferredcites →https://doi.org/10.1242/dev.063735openalex-snapshot

Patterning embryos with oscillations: structure, function and dynamics of the vertebrate segmentation clock

inferredcites →https://doi.org/10.1242/dev.063834openalex-snapshot

Evolutionary plasticity of segmentation clock networks

inferredcites →https://doi.org/10.1242/dev.093435openalex-snapshot

Wnt-regulated dynamics of positional information in zebrafish somitogenesis

inferredcites →https://doi.org/10.1242/dev.098905openalex-snapshot

An anterior limit of FGF/Erk signal activity marks the earliest future somite boundary in zebrafish

inferredcites →https://doi.org/10.1242/dev.104.2.331openalex-snapshot

Heat shock causes repeated segmental anomalies in the chick embryo

inferredcites →https://doi.org/10.1242/dev.119057openalex-snapshot

Dynamics of the slowing segmentation clock reveal alternating two-segment periodicity

inferredcites →https://doi.org/10.1242/dev.126.13.3005openalex-snapshot

her1, a zebrafish pair-rule like gene, acts downstream of notch signalling to control somite development

inferredcites →https://doi.org/10.1242/dev.128.23.4873openalex-snapshot

Fgf/MAPK signalling is a crucial positional cue in somite boundary formation

inferredcites →https://doi.org/10.1242/dev.129.12.2929openalex-snapshot

Hairy/E(spl)-related(Her) genes are central components of the segmentation oscillator and display redundancy with the Delta/Notch signaling pathway in the formation of anterior segmental boundaries in the zebrafish

inferredcites →https://doi.org/10.1242/dev.65.supplement.103openalex-snapshot

The control of somitogenesis in mouse embryos

inferredcites →https://doi.org/10.12688/f1000research.12369.1openalex-snapshot

Recent advances in understanding vertebrate segmentation

inferredcites →https://doi.org/10.1371/journal.pbio.0050150openalex-snapshot

Setting the Tempo in Development: An Investigation of the Zebrafish Somite Clock Mechanism

inferredcites →https://doi.org/10.7554/elife.05842openalex-snapshot

A balance of positive and negative regulators determines the pace of the segmentation clock

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.ydbio.2018.10.024openalex-snapshot

Of mice and plants: Comparative developmental systems biology

inferred← citeshttps://doi.org/10.1186/s13227-018-0113-2openalex-snapshot

Around the clock: gradient shape and noise impact the evolution of oscillatory segmentation dynamics

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