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Migration through a small pore disrupts inactive chromatin organization in neutrophil-like cells

https://doi.org/10.1101/339085
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1 of the 102 references listed on this page is in the Retraction Watch database as retracted (export 2026-11-04): 10.1371/journal.pone.0132377 (notice 2026-05-28).

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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rTNFα Facilitates Human Polymorphonuclear Leukocyte Adherence to Fibrinogen Matrices With Mobilization of Specific and Tertiary but Not Azurophilic Granule Markers
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Retinoic Acid Induction of Nuclear Envelope-Limited Chromatin Sheets in HL-60
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ggplot2: Elegant Graphics for Data Analysis
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Nuclear morphologies: their diversity and functional relevance
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Nuclear Deformability Constitutes a Rate-Limiting Step During Cell Migration in 3-D Environments
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Geographic variation in the incidence of myocardial calcification associated with acute myocardial infarction
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Functional properties of HL60 cells matured with all-trans-retinoic acid and DMSO: Differences in response to interleukin-8 and fMLP
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Force-Induced Changes in Subnuclear Movement and Rheology
inferredcites →https://doi.org/10.1016/j.bpj.2014.04.001openalex-snapshot
Fluid Shear Stress Increases Neutrophil Activation via Platelet-Activating Factor
inferredcites →https://doi.org/10.1016/j.bpj.2016.08.011openalex-snapshot
A Chemomechanical Model for Nuclear Morphology and Stresses during Cell Transendothelial Migration
inferredcites →https://doi.org/10.1016/j.bpj.2016.09.047openalex-snapshot
As a Nucleus Enters a Small Pore, Chromatin Stretches and Maintains Integrity, Even with DNA Breaks
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Nuclear mechanics during cell migration
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Dealing with the nucleus during cell migration
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Matrix Elasticity Directs Stem Cell Lineage Specification
inferredcites →https://doi.org/10.1016/j.cell.2012.01.059openalex-snapshot
Accumulation of the Inner Nuclear Envelope Protein Sun1 Is Pathogenic in Progeric and Dystrophic Laminopathies
inferredcites →https://doi.org/10.1016/j.cell.2014.11.021openalex-snapshot
A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
inferredcites →https://doi.org/10.1016/j.cell.2017.02.007openalex-snapshot
A Phase Separation Model for Transcriptional Control
inferredcites →https://doi.org/10.1016/j.cell.2017.04.022openalex-snapshot
Lamina-Associated Domains: Links with Chromosome Architecture, Heterochromatin, and Gene Repression
inferredcites →https://doi.org/10.1016/j.celrep.2016.12.076openalex-snapshot
Leukocytes Breach Endothelial Barriers by Insertion of Nuclear Lobes and Disassembly of Endothelial Actin Filaments
inferredcites →https://doi.org/10.1016/j.cels.2018.01.014openalex-snapshot
Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH
inferredcites →https://doi.org/10.1016/j.cub.2016.11.049openalex-snapshot
DNA Damage Follows Repair Factor Depletion and Portends Genome Variation in Cancer Cells after Pore Migration
inferredcites →https://doi.org/10.1016/j.ehj.2003.09.020openalex-snapshot
Cardiac features of Emery–Dreifuss muscular dystrophy caused by lamin A/C gene mutations
inferredcites →https://doi.org/10.1016/j.ejcb.2008.10.001openalex-snapshot
The LINC-less granulocyte nucleus
inferredcites →https://doi.org/10.1016/j.jmb.2014.09.008openalex-snapshot
Cytoskeletal Control of Nuclear Morphology and Chromatin Organization
inferredcites →https://doi.org/10.1016/j.micinf.2003.09.008openalex-snapshot
Neutrophil granules and secretory vesicles in inflammation
inferredcites →https://doi.org/10.1016/j.molcel.2010.05.004openalex-snapshot
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
inferredcites →https://doi.org/10.1016/j.redox.2013.12.026openalex-snapshot
A review of the mitochondrial and glycolytic metabolism in human platelets and leukocytes: Implications for their use as bioenergetic biomarkers
inferredcites →https://doi.org/10.1016/j.semcdb.2017.07.027openalex-snapshot
Mechanotransduction at the cell-matrix interface
inferredcites →https://doi.org/10.1016/j.stem.2016.01.007openalex-snapshot
Cell-of-Origin-Specific 3D Genome Structure Acquired during Somatic Cell Reprogramming
inferredcites →https://doi.org/10.1016/j.tcb.2010.09.002openalex-snapshot
The role of chromatin structure in cell migration
inferredcites →https://doi.org/10.1016/j.yjmcc.2007.11.008openalex-snapshot
Lamin A/C haploinsufficiency causes dilated cardiomyopathy and apoptosis-triggered cardiac conduction system disease
inferredcites →https://doi.org/10.1038/323560a0openalex-snapshot
The nuclear lamina is a meshwork of intermediate-type filaments
inferredcites →https://doi.org/10.1038/nature10137openalex-snapshot
Role of YAP/TAZ in mechanotransduction
inferredcites →https://doi.org/10.1038/nature11082openalex-snapshot
Topological domains in mammalian genomes identified by analysis of chromatin interactions
inferredcites →https://doi.org/10.1038/nature11279openalex-snapshot
The long-range interaction landscape of gene promoters
inferredcites →https://doi.org/10.1038/nature13986openalex-snapshot
Topologically associating domains are stable units of replication-timing regulation
inferredcites →https://doi.org/10.1038/nature21411openalex-snapshot
Complex multi-enhancer contacts captured by genome architecture mapping
inferredcites →https://doi.org/10.1038/nature22822openalex-snapshot
Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin
inferredcites →https://doi.org/10.1038/nature22989openalex-snapshot
Phase separation drives heterochromatin domain formation
inferredcites →https://doi.org/10.1038/ncb3387openalex-snapshot
Mechanical regulation of transcription controls Polycomb-mediated gene silencing during lineage commitment
inferredcites →https://doi.org/10.1038/ncomms8159openalex-snapshot
The tethering of chromatin to the nuclear envelope supports nuclear mechanics
inferredcites →https://doi.org/10.1038/ng.3286openalex-snapshot
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C
inferredcites →https://doi.org/10.1038/nmat4729openalex-snapshot
Transcription upregulation via force-induced direct stretching of chromatin
inferredcites →https://doi.org/10.1038/nmeth.3329openalex-snapshot
Identification of active transcriptional regulatory elements from GRO-seq data
inferredcites →https://doi.org/10.1038/nrm.2017.115openalex-snapshot
Transcription regulation by the Mediator complex
inferredcites →https://doi.org/10.1038/nrm2728openalex-snapshot
Rab GTPases as coordinators of vesicle traffic
inferredcites →https://doi.org/10.1038/s41467-017-02798-1openalex-snapshot
Transcriptional decomposition reveals active chromatin architectures and cell specific regulatory interactions
inferredcites →https://doi.org/10.1038/s41556-018-0038-yopenalex-snapshot
Emerging views of the nucleus as a cellular mechanosensor
inferredcites →https://doi.org/10.1038/s41594-018-0112-yopenalex-snapshot
RNA polymerase II clustering through carboxy-terminal domain phase separation
inferredcites →https://doi.org/10.1046/j.1365-3083.2002.01041.xopenalex-snapshot
Degranulation of Primary and Secondary Granules in Adherent Human Neutrophils
inferredcites →https://doi.org/10.1055/s-0037-1619947openalex-snapshot
Mechanotransduktion im Alter und bei Osteoporose
inferredcites →https://doi.org/10.1073/pnas.0812037106openalex-snapshot
SUN1 and SUN2 play critical but partially redundant roles in anchoring nuclei in skeletal muscle cells in mice
inferredcites →https://doi.org/10.1073/pnas.1300801110openalex-snapshot
Cell geometric constraints induce modular gene-expression patterns via redistribution of HDAC3 regulated by actomyosin contractility
inferredcites →https://doi.org/10.1074/jbc.m112.441535openalex-snapshot
Nuclear Envelope Composition Determines the Ability of Neutrophil-type Cells to Passage through Micron-scale Constrictions
inferredcites →https://doi.org/10.1080/07853890310016333openalex-snapshot
Mechanobiology and diseases of mechanotransduction
inferredcites →https://doi.org/10.1080/15384101.2014.995493openalex-snapshot
Aerobic glycolysis, motility, and cytoskeletal remodeling
inferredcites →https://doi.org/10.1080/19490992.2016.1201620openalex-snapshot
Geometric control and modeling of genome reprogramming
inferredcites →https://doi.org/10.1080/19491034.2017.1285989openalex-snapshot
Transcriptomes reflect the phenotypes of undifferentiated, granulocyte and macrophage forms of HL-60/S4 cells
inferredcites →https://doi.org/10.1083/jcb.201210152openalex-snapshot
Physical limits of cell migration: Control by ECM space and nuclear deformation and tuning by proteolysis and traction force
inferredcites →https://doi.org/10.1083/jcb.201706097openalex-snapshot
Enucleated cells reveal differential roles of the nucleus in cell migration, polarity, and mechanotransduction
inferredcites →https://doi.org/10.1084/jem.187.6.903openalex-snapshot
Neutrophils Emigrate from Venules by a Transendothelial Cell Pathway in Response to FMLP
inferredcites →https://doi.org/10.1088/1361-6463/aa6e18openalex-snapshot
Review of cellular mechanotransduction
inferredcites →https://doi.org/10.1091/mbc.e16-09-0653openalex-snapshot
Chromatin and lamin A determine two different mechanical response regimes of the cell nucleus
inferredcites →https://doi.org/10.1091/mbc.e17-06-0410openalex-snapshot
Chromatin histone modifications and rigidity affect nuclear morphology independent of lamins
inferredcites →https://doi.org/10.1093/bioinformatics/btq033openalex-snapshot
BEDTools: a flexible suite of utilities for comparing genomic features
inferredcites →https://doi.org/10.1093/bioinformatics/btw354openalex-snapshot
MultiQC: summarize analysis results for multiple tools and samples in a single report
inferredcites →https://doi.org/10.1093/nar/gkx145openalex-snapshot
A critical assessment of topologically associating domain prediction tools
inferredcites →https://doi.org/10.1101/121889openalex-snapshot
HiGlass: Web-based Visual Exploration and Analysis of Genome Interaction Maps
inferredcites →https://doi.org/10.1101/244038openalex-snapshot
Heterochromatin drives organization of conventional and inverted nuclei
inferredcites →https://doi.org/10.1101/gad.293910.116openalex-snapshot
Comprehensive characterization of neutrophil genome topology
inferredcites →https://doi.org/10.1101/sqb.2017.82.034710openalex-snapshot
Emerging Evidence of Chromosome Folding by Loop Extrusion
inferredcites →https://doi.org/10.1126/science.1181369openalex-snapshot
Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
inferredcites →https://doi.org/10.1126/science.1240104openalex-snapshot
Nuclear Lamin-A Scales with Tissue Stiffness and Enhances Matrix-Directed Differentiation
inferredcites →https://doi.org/10.1126/science.aad7297openalex-snapshot
Nuclear envelope rupture and repair during cancer cell migration
inferredcites →https://doi.org/10.1126/science.aad7611openalex-snapshot
ESCRT III repairs nuclear envelope ruptures during cell migration to limit DNA damage and cell death
inferredcites →https://doi.org/10.1126/science.aar3958openalex-snapshot
Coactivator condensation at super-enhancers links phase separation and gene control
inferredcites →https://doi.org/10.1126/science.aar7831openalex-snapshot
Real-time imaging of DNA loop extrusion by condensin
inferredcites →https://doi.org/10.1126/scisignal.aah3737openalex-snapshot
Cytoskeletal adaptivity regulates T cell receptor signaling
inferredcites →https://doi.org/10.1146/annurev-cellbio-100913-013325openalex-snapshot
Liquid-Liquid Phase Separation in Biology
inferredcites →https://doi.org/10.1152/ajpcell.00363.2014openalex-snapshot
Fluid shear, intercellular stress, and endothelial cell alignment
inferredcites →https://doi.org/10.1158/1078-0432.ccr-13-1180openalex-snapshot
DNA Methylation of the SLC16A3 Promoter Regulates Expression of the Human Lactate Transporter MCT4 in Renal Cancer with Consequences for Clinical Outcome
inferredcites →https://doi.org/10.1161/01.cir.0000134696.08436.65openalex-snapshot
Unexpected Severe Calcification After Transplantation of Bone Marrow Cells in Acute Myocardial Infarction
inferredcites →https://doi.org/10.1161/circulationaha.117.029430openalex-snapshot
High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure
inferredcites →https://doi.org/10.1186/s13059-018-1486-1openalex-snapshot
HiGlass: web-based visual exploration and analysis of genome interaction maps
inferredcites →https://doi.org/10.1189/jlb.0903412openalex-snapshot
Gene expression in mature neutrophils: early responses to inflammatory stimuli
inferredcites →https://doi.org/10.1189/jlb.3hi0716-293rropenalex-snapshot
Frontline Science: Tumor necrosis factor-α stimulation and priming of human neutrophil granule exocytosis
inferredcites →https://doi.org/10.1242/jcs.01357openalex-snapshot
The nuclear envelope lamina network has elasticity and a compressibility limit suggestive of a molecular shock absorber
inferredcites →https://doi.org/10.1242/jcs.058271openalex-snapshot
Efficient cell migration requires global chromatin condensation
inferredcites →https://doi.org/10.1242/jcs.069096openalex-snapshot
Nucleoskeleton mechanics at a glance
inferredcites →https://doi.org/10.1242/jcs.194712openalex-snapshot
The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants
inferredcites →https://doi.org/10.1242/jcs.202192openalex-snapshot
Emerging roles of mechanical forces in chromatin regulation
inferredcites →https://doi.org/10.1371/journal.pone.0132377openalex-snapshot
RETRACTED: Optimum 3D Matrix Stiffness for Maintenance of Cancer Stem Cells Is Dependent on Tissue Origin of Cancer Cells
inferredcites →https://doi.org/10.1371/journal.pone.0137221openalex-snapshot
Extracellular Acidification Acts as a Key Modulator of Neutrophil Apoptosis and Functions
inferredcites →https://doi.org/10.14714/cp58.270openalex-snapshot
Color Design for the Color Vision Impaired
inferredcites →https://doi.org/10.1515/hsz-2014-0267openalex-snapshot
Making the LINC: SUN and KASH protein interactions
inferredcites →https://doi.org/10.18632/oncotarget.4328openalex-snapshot
Epigenetic and oncogenic regulation of SLC16A7 (MCT2) results in protein over-expression, impacting on signalling and cellular phenotypes in prostate cancer
inferredcites →https://doi.org/10.2741/2057openalex-snapshot
Mechanotransduction in skeletal muscle
inferredcites →https://doi.org/10.3109/15419069809005596openalex-snapshot
Dependence of Neutrophil Activation on Cell Density and Adhesion
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fimmu.2014.00448openalex-snapshot
Granule Protein Processing and Regulated Secretion in Neutrophils
inferredcites →https://doi.org/10.3791/53464openalex-snapshot
Measurement and Analysis of Extracellular Acid Production to Determine Glycolytic Rate
inferredcites →https://doi.org/10.4049/jimmunol.154.8.4157openalex-snapshot
Mobilization of granules and secretory vesicles during in vivo exudation of human neutrophils.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41467-024-54120-5openalex-snapshot
Chromatin compaction during confined cell migration induces and reshapes nuclear condensates
inferred← citeshttps://doi.org/10.1038/s41565-023-01535-8openalex-snapshot
Evidence and therapeutic implications of biomechanically regulated immunosurveillance in cancer and other diseases
inferred← citeshttps://doi.org/10.1038/s41577-022-00761-wopenalex-snapshot
Tuning immunity through tissue mechanotransduction
inferred← citeshttps://doi.org/10.1186/s13059-022-02790-zopenalex-snapshot
A global high-density chromatin interaction network reveals functional long-range and trans-chromosomal relationships
inferred← citeshttps://doi.org/10.26754/jjii3a.20239050openalex-snapshot
Variación en la Condensación de la Cromatina durante la Migración Celular Confinada
inferred← citeshttps://doi.org/10.26754/jjii3a.20239501openalex-snapshot
María Sarasquete - Chromatin Condensation Variation during Confined Cell Migration
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