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Transmission cycles generate diversity in pathogenic viruses
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Outgoing claims: the papers this work cites, builds on, or argues with.
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The Human Polyomaviruses, BKV and JCV: Molecular Pathogenesis of Acute Disease and Potential Role in Cancer
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Early Stages of Influenza Virus Entry into Mv-1 Lung Cells: Involvement of Dynamin
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Repeated transfer of small RNA virus populations leading to balanced fitness with infrequent stochastic drift
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Type VI Secretion System Helps Find a Niche
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Influenza A Virus Transmission Bottlenecks Are Defined by Infection Route and Recipient Host
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The Speed of Evolution and Maintenance of Variation in Asexual Populations
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A simple cellular automaton model for influenza A viral infections
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The impact of host-cell dynamics on the fixation probability for lytic viruses
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Reservoir interactions and disease emergence
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Evaluating the importance of within- and between-host selection pressures on the evolution of chronic pathogens
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Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases
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Influenza vaccine: The challenge of antigenic drift
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The biology of influenza viruses
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Negative Strand Viruses 2000
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Apoptosis by influenza viruses correlates with efficiency of viral mRNA synthesis
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Influence of host species on the evolution of the nonstructural (NS) gene of influenza A viruses
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Transmission bottlenecks and the evolution of fitness in rapidly evolving RNA viruses
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Seasonal influenza in the United States, France, and Australia: transmission and prospects for control
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The role of evolution in the emergence of infectious diseases
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Quantifying influenza virus diversity and transmission in humans
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Dedicated protection for the female germ line
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The distribution of fitness effects of new mutations
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The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus
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Rapid fitness losses in mammalian RNA virus clones due to Muller's ratchet.
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Transmission bottlenecks as determinants of virulence in rapidly evolving pathogens
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Viral Shedding and Clinical Illness in Naturally Acquired Influenza Virus Infections
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The Probability of Fixation in Populations of Changing Size
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Evolution by Small Steps and Rugged Landscapes in the RNA Virus ϕ6
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Evaluating the Impact of Population Bottlenecks in Experimental Evolution
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Connecting within-host dynamics to the rate of viral molecular evolution
inferredcites →https://doi.org/10.1098/rsif.2010.0123openalex-snapshot
Risk factors for the evolutionary emergence of pathogens
inferredcites →https://doi.org/10.1098/rspb.2003.2539openalex-snapshot
Evolutionary dynamics of escape from biomedical intervention
inferredcites →https://doi.org/10.1098/rspb.2014.3033openalex-snapshot
Repeatability of adaptation in experimental populations of different sizes
inferredcites →https://doi.org/10.1098/rspb.2016.0749openalex-snapshot
Divergent evolution peaks under intermediate population bottlenecks during bacterial experimental evolution
inferredcites →https://doi.org/10.1098/rstb.2012.0086openalex-snapshot
What limits the evolutionary emergence of pathogens?
inferredcites →https://doi.org/10.1111/j.0014-3820.2001.tb00772.xopenalex-snapshot
THE PROBABILITY THAT BENEFICIAL MUTATIONS ARE LOST IN POPULATIONS WITH PERIODIC BOTTLENECKS
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Virulence evolution and the trade‐off hypothesis: history, current state of affairs and the future
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FIXATION PROBABILITIES DEPEND ON LIFE HISTORY: FECUNDITY, GENERATION TIME AND SURVIVAL IN A BURST‐DEATH MODEL
inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01394.xopenalex-snapshot
BRIDGING SCALES IN THE EVOLUTION OF INFECTIOUS DISEASE LIFE HISTORIES: THEORY
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The effect of population bottlenecks on mutation rate evolution in asexual populations
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Influenza virus population dynamics in the respiratory tract of experimentally infected mice
inferredcites →https://doi.org/10.1128/jvi.01623-05openalex-snapshot
Kinetics of Influenza A Virus Infection in Humans
inferredcites →https://doi.org/10.1128/jvi.06168-11openalex-snapshot
The TLR4-TRIF Pathway Protects against H5N1 Influenza Virus Infection
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The H275Y Neuraminidase Mutation of the Pandemic A/H1N1 Influenza Virus Lengthens the Eclipse Phase and Reduces Viral Output of Infected Cells, Potentially Compromising Fitness in Ferrets
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Novel catalytic activity associated with positive-strand RNA virus infection: nucleic acid-stimulated ATPase activity of the plum pox potyvirus helicaselike protein
inferredcites →https://doi.org/10.1128/jvi.65.1.232-244.1991openalex-snapshot
Transport of incoming influenza virus nucleocapsids into the nucleus
inferredcites →https://doi.org/10.1128/jvi.67.6.3620-3623.1993openalex-snapshot
Many-trillionfold amplification of single RNA virus particles fails to overcome the Muller's ratchet effect
inferredcites →https://doi.org/10.1128/jvi.69.5.2869-2872.1995openalex-snapshot
Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness
inferredcites →https://doi.org/10.1128/jvi.80.7.3675-3678.2006openalex-snapshot
Comparison of the Mutation Rates of Human Influenza A and B Viruses
inferredcites →https://doi.org/10.1128/mmbr.62.4.1171-1190.1998openalex-snapshot
Virus Maturation by Budding
inferredcites →https://doi.org/10.1164/arrd.1979.120.6.1313openalex-snapshot
Murine influenzal tracheitis: a model for the study of influenza and tracheal epithelial repair.
inferredcites →https://doi.org/10.1186/1471-2334-14-1openalex-snapshot
Clinical and microbiological characteristics of tigecycline non-susceptible Klebsiella pneumoniaebacteremia in Taiwan
inferredcites →https://doi.org/10.1186/1471-2334-14-480openalex-snapshot
Estimates of the reproduction number for seasonal, pandemic, and zoonotic influenza: a systematic review of the literature
inferredcites →https://doi.org/10.1186/1471-2458-11-s1-s7openalex-snapshot
A review of mathematical models of influenza A infections within a host or cell culture: lessons learned and challenges ahead
inferredcites →https://doi.org/10.1208/s12248-011-9284-7openalex-snapshot
Modeling the Effects of Vaccination and Treatment on Pandemic Influenza
inferredcites →https://doi.org/10.1371/journal.pcbi.1002026openalex-snapshot
A Mathematical Framework for Estimating Pathogen Transmission Fitness and Inoculum Size Using Data from a Competitive Mixtures Animal Model
inferredcites →https://doi.org/10.1371/journal.pone.0057088openalex-snapshot
Assessing Mathematical Models of Influenza Infections Using Features of the Immune Response
inferredcites →https://doi.org/10.1371/journal.ppat.1004823openalex-snapshot
Analysis of Bottlenecks in Experimental Models of Infection
inferredcites →https://doi.org/10.1534/genetics.106.067678openalex-snapshot
Beneficial Mutation–Selection Balance and the Effect of Linkage on Positive Selection
inferredcites →https://doi.org/10.1534/genetics.108.090555openalex-snapshot
Fixation Probability for Lytic Viruses: The Attachment-Lysis Model
inferredcites →https://doi.org/10.1534/genetics.108.093013openalex-snapshot
Surviving the Bottleneck: Transmission Mutants and the Evolution of Microbial Populations
inferredcites →https://doi.org/10.1534/genetics.114.172387openalex-snapshot
The Functional Basis of Wing Patterning in Heliconius Butterflies: The Molecules Behind Mimicry
inferredcites →https://doi.org/10.1534/genetics.114.172890openalex-snapshot
Survival Probability of Beneficial Mutations in Bacterial Batch Culture
inferredcites →https://doi.org/10.3390/v4091438openalex-snapshot
Evasion of Influenza A Viruses from Innate and Adaptive Immune Responses
inferredcites →https://doi.org/10.3390/v7102875openalex-snapshot
Modeling Influenza Virus Infection: A Roadmap for Influenza Research
inferredcites →https://doi.org/10.7883/yoken.jjid.2004.236openalex-snapshot
Defense Mechanisms against Influenza Virus Infection in the Respiratory Tract Mucosa
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