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A robust phylogenomic timetree for biotechnologically and medically important fungi in the genera Aspergillus and Penicillium
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/9780470015902.a0000376.pub2openalex-snapshot
Fungal Xerophiles (Osmophiles)
inferredcites →https://doi.org/10.1002/abio.370030116openalex-snapshot
Factors affecting growth and cellulose hydrolysis by the thermotolerant aspergillus nidulans from composts
inferredcites →https://doi.org/10.1006/mpev.1997.0452openalex-snapshot
General Time-Reversible Distances with Unequal Rates across Sites: Mixing Γ and Inverse Gaussian Distributions with Invariant Sites
inferredcites →https://doi.org/10.1007/978-0-387-98141-3openalex-snapshot
ggplot2: Elegant Graphics for Data Analysis
inferredcites →https://doi.org/10.1007/978-1-4615-0629-4_4openalex-snapshot
Biology and Ecology of Toxigenic Penicillium Species
inferredcites →https://doi.org/10.1007/978-3-540-74686-7openalex-snapshot
Computational Many-Particle Physics
inferredcites →https://doi.org/10.1007/978-3-662-10189-6_10openalex-snapshot
Fungal Molecular Evolution: Gene Trees and Geologic Time
inferredcites →https://doi.org/10.1007/bf00160154openalex-snapshot
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
inferredcites →https://doi.org/10.1007/bf01734359openalex-snapshot
Evolutionary trees from DNA sequences: A maximum likelihood approach
inferredcites →https://doi.org/10.1007/bf02109483openalex-snapshot
Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
inferredcites →https://doi.org/10.1007/s00253-015-6839-zopenalex-snapshot
Chemodiversity in the genus Aspergillus
inferredcites →https://doi.org/10.1016/0169-5347(96)10041-0openalex-snapshot
Among-site rate variation and its impact on phylogenetic analyses
inferredcites →https://doi.org/10.1016/b978-0-12-800262-9.00004-4openalex-snapshot
Modern Taxonomy of Biotechnologically Important Aspergillus and Penicillium Species
inferredcites →https://doi.org/10.1016/j.cub.2009.11.042openalex-snapshot
The hearing gene Prestin unites echolocating bats and whales
inferredcites →https://doi.org/10.1016/j.cub.2012.05.033openalex-snapshot
The Evolutionary Imprint of Domestication on Genome Variation and Function of the Filamentous Fungus Aspergillus oryzae
inferredcites →https://doi.org/10.1016/j.cub.2017.08.054openalex-snapshot
Embracing Uncertainty in Reconstructing Early Animal Evolution
inferredcites →https://doi.org/10.1016/j.fgb.2010.08.008openalex-snapshot
Fungal secondary metabolites as modulators of interactions with insects and other arthropods
inferredcites →https://doi.org/10.1016/j.fgb.2012.12.004openalex-snapshot
Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria
inferredcites →https://doi.org/10.1016/j.ijfoodmicro.2012.02.005openalex-snapshot
A taxonomic and ecological overview of cheese fungi
inferredcites →https://doi.org/10.1016/j.mib.2008.10.007openalex-snapshot
Secondary metabolism: regulation and role in fungal biology
inferredcites →https://doi.org/10.1016/j.simyco.2014.07.004openalex-snapshot
Phylogeny, identification and nomenclature of the genus Aspergillus
inferredcites →https://doi.org/10.1016/j.simyco.2016.11.006openalex-snapshot
Aspergillus is monophyletic: Evidence from multiple gene phylogenies and extrolites profiles
inferredcites →https://doi.org/10.1016/j.syapm.2005.02.012openalex-snapshot
Taxonomic comparison of three different groups of aflatoxin producers and a new efficient producer of aflatoxin B1, sterigmatocystin and 3-O-methylsterigmatocystin, Aspergillus rambellii sp. nov.
inferredcites →https://doi.org/10.1016/j.tig.2008.02.003openalex-snapshot
Conservation of divergent transcription in fungi
inferredcites →https://doi.org/10.1016/j.tim.2012.09.005openalex-snapshot
The function and evolution of the Aspergillus genome
inferredcites →https://doi.org/10.1016/j.tplants.2013.04.009openalex-snapshot
Origin of land plants using the multispecies coalescent model
inferredcites →https://doi.org/10.1016/j.ympev.2014.04.024openalex-snapshot
Estimating the Phanerozoic history of the Ascomycota lineages: Combining fossil and molecular data
inferredcites →https://doi.org/10.1016/s0007-1536(84)80074-1openalex-snapshot
Effects of gas composition and water activity on growth of field and storage fungi and their interactions
inferredcites →https://doi.org/10.1016/s0076-6879(96)66026-1openalex-snapshot
[24] Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods
inferredcites →https://doi.org/10.1016/s0140-6736(01)08728-1openalex-snapshot
PENICILLIN AS A CHEMOTHERAPEUTIC AGENT
inferredcites →https://doi.org/10.1016/s0168-9525(03)00112-4openalex-snapshot
Phylogeny for the faint of heart: a tutorial
inferredcites →https://doi.org/10.1016/s1055-7903(03)00057-5openalex-snapshot
The root of the mammalian tree inferred from whole mitochondrial genomes
inferredcites →https://doi.org/10.1021/jf60170a024openalex-snapshot
Production of Blue cheese flavor via submerged fermentation by Penicillium roqueforti
inferredcites →https://doi.org/10.1038/nature02053openalex-snapshot
Genome-scale approaches to resolving incongruence in molecular phylogenies
inferredcites →https://doi.org/10.1038/nature04332openalex-snapshot
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus
inferredcites →https://doi.org/10.1038/nature04789openalex-snapshot
Genetic evidence for complex speciation of humans and chimpanzees
inferredcites →https://doi.org/10.1038/nature12130openalex-snapshot
Inferring ancient divergences requires genes with strong phylogenetic signals
inferredcites →https://doi.org/10.1038/nbt1282openalex-snapshot
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
inferredcites →https://doi.org/10.1038/nmeth.4285openalex-snapshot
ModelFinder: fast model selection for accurate phylogenetic estimates
inferredcites →https://doi.org/10.1038/nmicrobiol.2017.44openalex-snapshot
Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species
inferredcites →https://doi.org/10.1038/nrmicro1286openalex-snapshot
Fungal secondary metabolism — from biochemistry to genomics
inferredcites →https://doi.org/10.1038/s41559-016-0020openalex-snapshot
Genome-wide interrogation advances resolution of recalcitrant groups in the tree of life
inferredcites →https://doi.org/10.1038/s41559-017-0126openalex-snapshot
Contentious relationships in phylogenomic studies can be driven by a handful of genes
inferredcites →https://doi.org/10.1038/s41579-018-0075-3openalex-snapshot
The birth, evolution and death of metabolic gene clusters in fungi
inferredcites →https://doi.org/10.1046/j.1365-2672.1997.00297.xopenalex-snapshot
Ecological determinants for germination and growth of some Aspergillus and Penicillium spp. from maize grain
inferredcites →https://doi.org/10.1073/pnas.0610699104openalex-snapshot
Pattern pluralism and the Tree of Life hypothesis
inferredcites →https://doi.org/10.1073/pnas.0900233106openalex-snapshot
Evidence for an ancient adaptive episode of convergent molecular evolution
inferredcites →https://doi.org/10.1073/pnas.1211733109openalex-snapshot
Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
inferredcites →https://doi.org/10.1073/pnas.1507072112openalex-snapshot
The adaptive radiation of lichen-forming Teloschistaceae is associated with sunscreening pigments and a bark-to-rock substrate shift
inferredcites →https://doi.org/10.1073/pnas.1603941113openalex-snapshot
Comparative genomics of biotechnologically important yeasts
inferredcites →https://doi.org/10.1073/pnas.1616744114openalex-snapshot
Genomic evidence reveals a radiation of placental mammals uninterrupted by the KPg boundary
inferredcites →https://doi.org/10.1073/pnas.1715954115openalex-snapshot
Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species
inferredcites →https://doi.org/10.1073/pnas.77.7.3957openalex-snapshot
Mevinolin: a highly potent competitive inhibitor of hydroxymethylglutaryl-coenzyme A reductase and a cholesterol-lowering agent.
inferredcites →https://doi.org/10.1080/02681219480000701openalex-snapshot
The current role ofAspergillusandPenicilliumin human and animal health
inferredcites →https://doi.org/10.1080/10635150290069913openalex-snapshot
An Approximately Unbiased Test of Phylogenetic Tree Selection
inferredcites →https://doi.org/10.1080/10635150802429642openalex-snapshot
A Rapid Bootstrap Algorithm for the RAxML Web Servers
inferredcites →https://doi.org/10.1080/10635159950127321openalex-snapshot
Testing Hybridization Hypotheses Based on Incongruent Gene Trees
inferredcites →https://doi.org/10.1088/1751-8113/44/8/085201openalex-snapshot
A ‘missing’ family of classical orthogonal polynomials
inferredcites →https://doi.org/10.1089/cmb.2012.0021openalex-snapshot
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
inferredcites →https://doi.org/10.1093/bib/bbr014openalex-snapshot
The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy
inferredcites →https://doi.org/10.1093/bioinformatics/8.3.275openalex-snapshot
The rapid generation of mutation data matrices from protein sequences
inferredcites →https://doi.org/10.1093/bioinformatics/btg1080openalex-snapshot
Gene prediction with a hidden Markov model and a new intron submodel
inferredcites →https://doi.org/10.1093/bioinformatics/bti594openalex-snapshot
pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies
inferredcites →https://doi.org/10.1093/bioinformatics/btl505openalex-snapshot
TimeTree: a public knowledge-base of divergence times among organisms
inferredcites →https://doi.org/10.1093/bioinformatics/btn322openalex-snapshot
Database indexing for production MegaBLAST searches
inferredcites →https://doi.org/10.1093/bioinformatics/btp163openalex-snapshot
Biopython: freely available Python tools for computational molecular biology and bioinformatics
inferredcites →https://doi.org/10.1093/bioinformatics/btp348openalex-snapshot
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
inferredcites →https://doi.org/10.1093/bioinformatics/btq243openalex-snapshot
The Newick utilities: high-throughput phylogenetic tree processing in the U nix shell
inferredcites →https://doi.org/10.1093/bioinformatics/btt086openalex-snapshot
QUAST: quality assessment tool for genome assemblies
inferredcites →https://doi.org/10.1093/bioinformatics/btt310openalex-snapshot
Informed and automated k -mer size selection for genome assembly
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/bioinformatics/btv234openalex-snapshot
ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes
inferredcites →https://doi.org/10.1093/bioinformatics/btv351openalex-snapshot
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
inferredcites →https://doi.org/10.1093/bioinformatics/btx364openalex-snapshot
UpSetR: an R package for the visualization of intersecting sets and their properties
inferredcites →https://doi.org/10.1093/clinids/2.1.129openalex-snapshot
On the Antibacterial Action of Cultures of a Penicillium, with Special Reference to Their Use in the Isolation of B. influenzae
inferredcites →https://doi.org/10.1093/dnares/dsn020openalex-snapshot
Genomics of Aspergillus oryzae: Learning from the History of Koji Mold and Exploration of Its Future
inferredcites →https://doi.org/10.1093/gbe/evv169openalex-snapshot
Genomic Analysis of an Ascomycete Fungus from the Rice Planthopper Reveals How It Adapts to an Endosymbiotic Lifestyle
inferredcites →https://doi.org/10.1093/gbe/evv246openalex-snapshot
Draft Genome Sequences of Two Closely Related AflatoxigenicAspergillusSpecies Obtained from the Ivory Coast
inferredcites →https://doi.org/10.1093/gbe/evw179openalex-snapshot
A Genome-Scale Investigation of How Sequence, Function, and Tree-Based Gene Properties Influence Phylogenetic Inference
inferredcites →https://doi.org/10.1093/gbe/evx006openalex-snapshot
Genomic features of the damselfly Calopteryx splendens representing a sister clade to most insect orders
inferredcites →https://doi.org/10.1093/molbev/msh137openalex-snapshot
Genome-Scale Phylogeny and the Detection of Systematic Biases
inferredcites →https://doi.org/10.1093/molbev/msh176openalex-snapshot
IQPNNI: Moving Fast Through Tree Space and Stopping in Time
inferredcites →https://doi.org/10.1093/molbev/msi005openalex-snapshot
Different Versions of the Dayhoff Rate Matrix
inferredcites →https://doi.org/10.1093/molbev/msi121openalex-snapshot
More Genes or More Taxa? The Relative Contribution of Gene Number and Taxon Number to Phylogenetic Accuracy
inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot
PAML 4: Phylogenetic Analysis by Maximum Likelihood
inferredcites →https://doi.org/10.1093/molbev/msn067openalex-snapshot
An Improved General Amino Acid Replacement Matrix
inferredcites →https://doi.org/10.1093/molbev/msr202openalex-snapshot
Statistics and Truth in Phylogenomics
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/molbev/msu061openalex-snapshot
Novel Information Theory-Based Measures for Quantifying Incongruence among Phylogenetic Trees
inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
inferredcites →https://doi.org/10.1093/molbev/msw040openalex-snapshot
Computing the Internode Certainty and Related Measures from Partial Gene Trees
inferredcites →https://doi.org/10.1093/molbev/msx281openalex-snapshot
UFBoot2: Improving the Ultrafast Bootstrap Approximation
inferredcites →https://doi.org/10.1093/molbev/msx302openalex-snapshot
Evaluating Fast Maximum Likelihood-Based Phylogenetic Programs Using Empirical Phylogenomic Data Sets
inferredcites →https://doi.org/10.1093/molbev/msx319openalex-snapshot
BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics
inferredcites →https://doi.org/10.1093/nar/gkh073openalex-snapshot
Database resources of the National Center for Biotechnology Information: update
inferredcites →https://doi.org/10.1093/nar/gkn741openalex-snapshot
Database resources of the National Center for Biotechnology Information
inferredcites →https://doi.org/10.1093/nar/gks1116openalex-snapshot
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026201openalex-snapshot
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040097openalex-snapshot
Accuracies of the Simple Methods for Estimating the Bootstrap Probability of a Maximum-Likelihood Tree
inferredcites →https://doi.org/10.1093/sysbio/syw037openalex-snapshot
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices
inferredcites →https://doi.org/10.1093/sysbio/syz058openalex-snapshot
Quartet-Based Computations of Internode Certainty Provide Robust Measures of Phylogenetic Incongruence
inferredcites →https://doi.org/10.1094/mpmi-09-14-0261-fiopenalex-snapshot
Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity
inferredcites →https://doi.org/10.1094/mpmi-12-14-0398-fiopenalex-snapshot
Genomic Characterization Reveals Insights Into Patulin Biosynthesis and Pathogenicity in Penicillium Species
inferredcites →https://doi.org/10.1098/rsbl.2007.0338openalex-snapshot
Secondary chemicals protect mould from fungivory
inferredcites →https://doi.org/10.1099/mic.0.2007/007641-0openalex-snapshot
Aspergillus flavus: human pathogen, allergen and mycotoxin producer
inferredcites →https://doi.org/10.1101/gr.087551.108openalex-snapshot
Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives
inferredcites →https://doi.org/10.1101/gr.159426.113openalex-snapshot
Genome-wide evidence for speciation with gene flow in Heliconius butterflies
inferredcites →https://doi.org/10.1101/pdb.top39openalex-snapshot
Using BLOSUM in Sequence Alignments
inferredcites →https://doi.org/10.1111/j.1558-5646.1985.tb00420.xopenalex-snapshot
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00549.xopenalex-snapshot
IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?
inferredcites →https://doi.org/10.1111/j.1759-6831.2012.00236.xopenalex-snapshot
The unbearable uncertainty of Bayesian divergence time estimation
inferredcites →https://doi.org/10.1111/pala.12142openalex-snapshot
strap: an R package for plotting phylogenies against stratigraphy and assessing their stratigraphic congruence
inferredcites →https://doi.org/10.1111/zsc.12213openalex-snapshot
The phylogenomic forest of bird trees contains a hard polytomy at the root of Neoaves
inferredcites →https://doi.org/10.1126/science.1253451openalex-snapshot
Whole-genome analyses resolve early branches in the tree of life of modern birds
inferredcites →https://doi.org/10.1126/science.1257570openalex-snapshot
Phylogenomics resolves the timing and pattern of insect evolution
inferredcites →https://doi.org/10.1126/science.7302565openalex-snapshot
Ranking Animal Carcinogens: A Proposed Regulatory Approach
inferredcites →https://doi.org/10.1128/aem.06645-11openalex-snapshot
The Composition of Camembert Cheese-Ripening Cultures Modulates both Mycelial Growth and Appearance
inferredcites →https://doi.org/10.1128/msphere.00018-19openalex-snapshot
Characterizing the Pathogenic, Genomic, and Chemical Traits of Aspergillus fischeri , a Close Relative of the Major Human Fungal Pathogen Aspergillus fumigatus
inferredcites →https://doi.org/10.1136/bmj.g7327openalex-snapshot
Spearman’s rank correlation coefficient
inferredcites →https://doi.org/10.1145/974614.974660openalex-snapshot
Simultaneous identification of duplications and lateral transfers
inferredcites →https://doi.org/10.1146/annurev-genet-120215-035203openalex-snapshot
Regulation and Role of Fungal Secondary Metabolites
inferredcites →https://doi.org/10.1146/annurev-micro-092412-155650openalex-snapshot
Fusarium Pathogenomics
inferredcites →https://doi.org/10.1146/annurev.mi.44.100190.002143openalex-snapshot
FUNCTIONS OF SECONDARY METABOLITES
inferredcites →https://doi.org/10.1177/1934578x1501001012openalex-snapshot
Bioactive Secondary Metabolites Produced by the Fungal Endophytes of Conifers
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/1471-2148-13-40openalex-snapshot
Gene make-up: rapid and massive intron gains after horizontal transfer of a bacterial α-amylase gene to Basidiomycetes
inferredcites →https://doi.org/10.1186/1471-2164-13-646openalex-snapshot
Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus
inferredcites →https://doi.org/10.1186/s13059-017-1151-0openalex-snapshot
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
inferredcites →https://doi.org/10.12705/653.10openalex-snapshot
Choosing one name for pleomorphic fungi: The example of Aspergillus versus Eurotium , Neosartorya and Emericella
inferredcites →https://doi.org/10.1371/journal.pcbi.1002195openalex-snapshot
Accelerated Profile HMM Searches
inferredcites →https://doi.org/10.1371/journal.pgen.0030007openalex-snapshot
Genomic Relationships and Speciation Times of Human, Chimpanzee, and Gorilla Inferred from a Coalescent Hidden Markov Model
inferredcites →https://doi.org/10.1371/journal.pone.0022783openalex-snapshot
Addressing Inter-Gene Heterogeneity in Maximum Likelihood Phylogenomic Analysis: Yeasts Revisited
inferredcites →https://doi.org/10.1534/g3.116.034249openalex-snapshot
In Silico Whole Genome Sequencer and Analyzer (iWGS): a Computational Pipeline to Guide the Design and Analysis of de novo Genome Sequencing Studies
inferredcites →https://doi.org/10.1534/g3.116.034744openalex-snapshot
Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data
inferredcites →https://doi.org/10.1554/04-385openalex-snapshot
GENE TREE DISTRIBUTIONS UNDER THE COALESCENT PROCESS
inferredcites →https://doi.org/10.18637/jss.v025.i01openalex-snapshot
FactoMineR : An R Package for Multivariate Analysis
inferredcites →https://doi.org/10.18637/jss.v025.i14openalex-snapshot
GEEQBOX : A MATLAB Toolbox for Generalized Estimating Equations and Quasi-Least Squares
inferredcites →https://doi.org/10.2183/pjab.86.484openalex-snapshot
A historical perspective on the discovery of statins
inferredcites →https://doi.org/10.3114/sim.2011.70.01openalex-snapshot
Phylogeny of Penicillium and the segregation of Trichocomaceae into three families
inferredcites →https://doi.org/10.3389/fmicb.2010.00134openalex-snapshot
A Brief History of the Antibiotic Era: Lessons Learned and Challenges for the Future
inferredcites →https://doi.org/10.3389/fmicb.2016.01541openalex-snapshot
Genome Sequencing and Comparative Genomics Analysis Revealed Pathogenic Potential in Penicillium capsulatum as a Novel Fungal Pathogen Belonging to Eurotiales
inferredcites →https://doi.org/10.3852/08-173openalex-snapshot
Characterization of theAspergillus ochraceoroseusaflatoxin/sterigmatocystin biosynthetic gene cluster
inferredcites →https://doi.org/10.3852/14-060openalex-snapshot
Aspergillus , its sexual states and the new International Code of Nomenclature
inferredcites →https://doi.org/10.7164/antibiotics.29.1346openalex-snapshot
ML-236A, ML-236B, and ML-236C, new inhibitors of cholesterogensis produced by Penicillium citrinum.
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1016/j.cub.2020.04.071openalex-snapshot
Pathogenic Allodiploid Hybrids of Aspergillus Fungi
inferred← citeshttps://doi.org/10.1016/j.cub.2021.01.074openalex-snapshot
A genome-scale phylogeny of the kingdom Fungi
inferred← citeshttps://doi.org/10.1016/j.simyco.2020.05.002openalex-snapshot
Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): An overview of families, genera, subgenera, sections, series and species
inferred← citeshttps://doi.org/10.1093/g3journal/jkae063openalex-snapshot
The evolution of the gliotoxin biosynthetic gene cluster in Penicillium fungi
inferred← citeshttps://doi.org/10.1093/gbe/evaa107openalex-snapshot
Recurrent Loss of abaA, a Master Regulator of Asexual Development in Filamentous Fungi, Correlates with Changes in Genomic and Morphological Traits
inferred← citeshttps://doi.org/10.1093/gbe/evaa163openalex-snapshot
Origin and Evolution of Fusidane-Type Antibiotics Biosynthetic Pathway through Multiple Horizontal Gene Transfers
inferred← citeshttps://doi.org/10.1093/gbe/evaa267openalex-snapshot
Whole-Genome Comparisons of Ergot Fungi Reveals the Divergence and Evolution of Species within the Genus Claviceps Are the Result of Varying Mechanisms Driving Genome Evolution and Host Range Expansion
inferred← citeshttps://doi.org/10.1099/mgen.0.000570openalex-snapshot
Analysis of putative quadruplex-forming sequences in fungal genomes: novel antifungal targets?
inferred← citeshttps://doi.org/10.1128/mbio.02445-19openalex-snapshot
Rapid Phenotypic and Metabolomic Domestication of Wild Penicillium Molds on Cheese
inferred← citeshttps://doi.org/10.1128/mbio.02458-20openalex-snapshot
Aspergillus fumigatus G-Protein Coupled Receptors GprM and GprJ Are Important for the Regulation of the Cell Wall Integrity Pathway, Secondary Metabolite Production, and Virulence
inferred← citeshttps://doi.org/10.1128/mra.01328-19openalex-snapshot
Genome Sequences of Two Strains of the Food Spoilage Mold Aspergillus fischeri
inferred← citeshttps://doi.org/10.1128/msphere.00018-19openalex-snapshot
Characterizing the Pathogenic, Genomic, and Chemical Traits of Aspergillus fischeri , a Close Relative of the Major Human Fungal Pathogen Aspergillus fumigatus
inferred← citeshttps://doi.org/10.1128/msphere.00156-20openalex-snapshot
Diversity of Secondary Metabolism in Aspergillus nidulans Clinical Isolates
inferred← citeshttps://doi.org/10.1186/s13104-019-4577-5openalex-snapshot
Treehouse: a user-friendly application to obtain subtrees from large phylogenies
inferred← citeshttps://doi.org/10.1371/journal.pbio.3001007openalex-snapshot
ClipKIT: A multiple sequence alignment trimming software for accurate phylogenomic inference
inferred← citeshttps://doi.org/10.1371/journal.ppat.1008315openalex-snapshot
Evolving moldy murderers: Aspergillus section Fumigati as a model for studying the repeated evolution of fungal pathogenicity
inferred← citeshttps://doi.org/10.1371/journal.ppat.1008645openalex-snapshot
The Aspergillus fumigatus transcription factor RglT is important for gliotoxin biosynthesis and self-protection, and virulence
inferred← citeshttps://doi.org/10.1534/genetics.120.303549openalex-snapshot
Variation Among Biosynthetic Gene Clusters, Secondary Metabolite Profiles, and Cards of Virulence Across Aspergillus Species
inferred← citeshttps://doi.org/10.3389/fgene.2020.00459openalex-snapshot
Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens Aspergillus fumigatus, Aspergillus lentulus, and Aspergillus fumigatiaffinis
inferred← citeshttps://doi.org/10.3389/fmicb.2021.663323openalex-snapshot
The Aspergillus niger Major Allergen (Asp n 3) DNA-Specific Sequence Is a Reliable Marker to Identify Early Fungal Contamination and Postharvest Damage in Mangifera indica Fruit
inferred← citeshttps://doi.org/10.3390/ijms21186660openalex-snapshot
The brlA Gene Deletion Reveals That Patulin Biosynthesis Is Not Related to Conidiation in Penicillium expansum
inferred← citeshttps://doi.org/10.3390/jof7040270openalex-snapshot
Identifying Conserved Generic Aspergillus spp. Co-Expressed Gene Modules Associated with Germination Using Cross-Platform and Cross-Species Transcriptomics
inferred← citeshttps://doi.org/10.3390/life10120356openalex-snapshot
An Overview of Genomics, Phylogenomics and Proteomics Approaches in Ascomycota
inferred← citeshttps://doi.org/10.3390/microbiolres13020024openalex-snapshot
Identification of Fungi in Flaxseed (L. usitatissimum L.) Using the ITS1 and ITS2 Intergenic Regions
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