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Modeling Cellular Resource Allocation Reveals Low Phenotypic Plasticity of C 4 Plants and Infers Environments of C 4 Photosynthesis Evolution

https://doi.org/10.1101/371096
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf00386231openalex-snapshot
A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species
inferredcites →https://doi.org/10.1007/bf00963816openalex-snapshot
A model of photosynthetic CO2 assimilation and carbon-isotope discrimination in leaves of certain C3−C4 intermediates
inferredcites →https://doi.org/10.1007/s00442-011-2201-zopenalex-snapshot
Effects of low atmospheric CO2 and elevated temperature during growth on the gas exchange responses of C3, C3–C4 intermediate, and C4 species from three evolutionary lineages of C4 photosynthesis
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The most abundant protein in the world
inferredcites →https://doi.org/10.1016/b978-0-12-152801-0.50007-9openalex-snapshot
Limitation of Metabolite Concentrations and the Conservation of Solvent Capacity in the Living Cell
inferredcites →https://doi.org/10.1016/b978-012460370-7/50012-7openalex-snapshot
Implications of Stress in Low CO2 Atmospheres of the Past
inferredcites →https://doi.org/10.1016/b978-012614440-6/50004-5openalex-snapshot
The Biochemistry of C4 Photosynthesis
inferredcites →https://doi.org/10.1016/j.cell.2013.04.058openalex-snapshot
Predicting C4 Photosynthesis Evolution: Modular, Individually Adaptive Steps on a Mount Fuji Fitness Landscape
inferredcites →https://doi.org/10.1016/j.pbi.2010.01.006openalex-snapshot
Photorespiration: current status and approaches for metabolic engineering
inferredcites →https://doi.org/10.1016/s0167-1987(01)00176-3openalex-snapshot
Nitrogen fertilization management for no-till cereal production in the Canadian Great Plains: a review
inferredcites →https://doi.org/10.1016/s0928-3420(00)80006-3openalex-snapshot
Would C4 rice produce more biomass than C3 rice?**Sheehy JE, Mitchell PL, Hardy B, editors. 2000. Redesigning rice photosynthesis to increase yield. Proceedings of the Workshop on The Quest to Reduce Hunger: Redesigning Rice Photosynthesis, 30 Nov.-3 Dec. 1999, Los Baños, Philippines. Makati City…
inferredcites →https://doi.org/10.1038/msb.2009.77openalex-snapshot
Applications of genome‐scale metabolic reconstructions
inferredcites →https://doi.org/10.1038/nature01149openalex-snapshot
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
inferredcites →https://doi.org/10.1038/s41467-017-01242-8openalex-snapshot
Quantifying the benefit of a proteome reserve in fluctuating environments
inferredcites →https://doi.org/10.1046/j.0016-8025.2003.01050.xopenalex-snapshot
In vivo temperature response functions of parameters required to model RuBP‐limited photosynthesis
inferredcites →https://doi.org/10.1046/j.1365-3040.1997.d01-133.xopenalex-snapshot
A model separating leaf structural and physiological effects on carbon gain along light gradients for the shade‐tolerant species Acer saccharum
inferredcites →https://doi.org/10.1071/9780643103405openalex-snapshot
Biochemical Models of Leaf Photosynthesis
inferredcites →https://doi.org/10.1073/pnas.0609845104openalex-snapshot
Intracellular crowding defines the mode and sequence of substrate uptake by Escherichia coli and constrains its metabolic activity
inferredcites →https://doi.org/10.1073/pnas.0911663107openalex-snapshot
Cross-species analysis traces adaptation of Rubisco toward optimality in a low-dimensional landscape
inferredcites →https://doi.org/10.1073/pnas.1617508114openalex-snapshot
Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth
inferredcites →https://doi.org/10.1093/jxb/erj040openalex-snapshot
Is C4 photosynthesis less phenotypically plastic than C3 photosynthesis?*
inferredcites →https://doi.org/10.1093/pcp/pcg113openalex-snapshot
Differences between Maize and Rice in N-use Efficiency for Photosynthesis and Protein Allocation
inferredcites →https://doi.org/10.1093/pcp/pcw012openalex-snapshot
Promotion of Cyclic Electron Transport Around Photosystem I with the Development of C4Photosynthesis
inferredcites →https://doi.org/10.1101/128009openalex-snapshot
Enzymes and Substrates Are Balanced at Minimal Combined Mass Concentration in vivo
inferredcites →https://doi.org/10.1104/pp.010331openalex-snapshot
Symbiotic Nitrogen Fixation and Phosphorus Acquisition. Plant Nutrition in a World of Declining Renewable Resources
inferredcites →https://doi.org/10.1104/pp.104.054759openalex-snapshot
Faster Rubisco Is the Key to Superior Nitrogen-Use Efficiency in NADP-Malic Enzyme Relative to NAD-Malic Enzyme C4 Grasses
inferredcites →https://doi.org/10.1104/pp.107.103713openalex-snapshot
Optimizing the Distribution of Resources between Enzymes of Carbon Metabolism Can Dramatically Increase Photosynthetic Rate: A Numerical Simulation Using an Evolutionary Algorithm
inferredcites →https://doi.org/10.1104/pp.109.148817openalex-snapshot
AraGEM, a Genome-Scale Reconstruction of the Primary Metabolic Network in Arabidopsis
inferredcites →https://doi.org/10.1104/pp.110.166652openalex-snapshot
The Importance of Energy Balance in Improving Photosynthetic Productivity
inferredcites →https://doi.org/10.1104/pp.113.230284openalex-snapshot
Elements Required for an Efficient NADP-Malic Enzyme Type C4 Photosynthesis
inferredcites →https://doi.org/10.1104/pp.115.3.1163openalex-snapshot
Expressing an RbcS Antisense Gene in Transgenic Flaveria bidentis Leads to an Increased Quantum Requirement for CO2 Fixed in Photosystems I and II
inferredcites →https://doi.org/10.1111/j.1365-3040.1991.tb00958.xopenalex-snapshot
Use of a model of photosynthesis and leaf microenvironment to predict optimal stomatal conductance and leaf nitrogen partitioning
inferredcites →https://doi.org/10.1111/j.1365-3040.2006.01605.xopenalex-snapshot
High temperature acclimation of C4 photosynthesis is linked to changes in photosynthetic biochemistry
inferredcites →https://doi.org/10.1111/j.1365-3040.2007.01691.xopenalex-snapshot
The effect of temperature on C4‐type leaf photosynthesis parameters
inferredcites →https://doi.org/10.1111/j.1365-3040.2008.01918.xopenalex-snapshot
Nitrogen in cell walls of sclerophyllous leaves accounts for little of the variation in photosynthetic nitrogen‐use efficiency
inferredcites →https://doi.org/10.1111/j.1365-3040.2011.02340.xopenalex-snapshot
Water‐use efficiency and nitrogen‐use efficiency of C3‐C4 intermediate species of Flaveria Juss. (Asteraceae)
inferredcites →https://doi.org/10.1111/j.1469-8137.2004.00974.xopenalex-snapshot
The evolution of C4photosynthesis
inferredcites →https://doi.org/10.1111/j.1469-8137.2010.03441.xopenalex-snapshot
Plant responses to low [CO2] of the past
inferredcites →https://doi.org/10.1111/j.1469-8137.2010.03505.xopenalex-snapshot
From sunlight to phytomass: on the potential efficiency of converting solar radiation to phyto‐energy
inferredcites →https://doi.org/10.1111/j.1558-5646.2010.01168.xopenalex-snapshot
COMPLEX EVOLUTIONARY TRANSITIONS AND THE SIGNIFICANCE OF C3-C4 INTERMEDIATE FORMS OF PHOTOSYNTHESIS IN MOLLUGINACEAE
inferredcites →https://doi.org/10.1126/science.1061052openalex-snapshot
Molecular Evolution of Protein Atomic Composition
inferredcites →https://doi.org/10.1371/journal.pone.0038345openalex-snapshot
The Coordination of Leaf Photosynthesis Links C and N Fluxes in C3 Plant Species
inferredcites →https://doi.org/10.2307/2398862openalex-snapshot
Systematics of Flaveria (Flaveriinae-Asteraceae)
inferredcites →https://doi.org/10.3732/ajb.92.11.1911openalex-snapshot
Phylogeny of Flaveria (Asteraceae) and inference of C4 photosynthesis evolution
inferredcites →https://doi.org/10.7554/elife.02478openalex-snapshot
The role of photorespiration during the evolution of C4 photosynthesis in the genus Flaveria

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1101/2020.05.15.098327openalex-snapshot
Optimal coordination and reorganization of photosynthetic properties in C 4 grasses
inferred← citeshttps://doi.org/10.1111/pce.14506openalex-snapshot
Optimal coordination and reorganization of photosynthetic properties in C4 grasses
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