On the public citation graph
Octave plots for visualizing diversity of microbial OTUs
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Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/j.1538-7305.1948.tb00917.xopenalex-snapshot
A Mathematical Theory of Communication
inferredcites →https://doi.org/10.1002/j.1538-7305.1948.tb01338.xopenalex-snapshot
A Mathematical Theory of Communication
inferredcites →https://doi.org/10.1016/j.funeco.2012.06.003openalex-snapshot
Don't make a mista(g)ke: is tag switching an overlooked source of error in amplicon pyrosequencing studies?
inferredcites →https://doi.org/10.1038/ismej.2013.141openalex-snapshot
Resistance and resilience of the forest soil microbiome to logging-associated compaction
inferredcites →https://doi.org/10.1038/nmeth.2276openalex-snapshot
Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing
inferredcites →https://doi.org/10.1038/nmeth.2604openalex-snapshot
UPARSE: highly accurate OTU sequences from microbial amplicon reads
inferredcites →https://doi.org/10.1038/nmeth.3869openalex-snapshot
DADA2: High-resolution sample inference from Illumina amplicon data
inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot
QIIME allows analysis of high-throughput community sequencing data
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.242openalex-snapshot
Relic DNA is abundant in soil and obscures estimates of soil microbial diversity
inferredcites →https://doi.org/10.1038/nrg3182openalex-snapshot
The human microbiome: at the interface of health and disease
inferredcites →https://doi.org/10.1093/bioinformatics/btq461openalex-snapshot
Search and clustering orders of magnitude faster than BLAST
inferredcites →https://doi.org/10.1101/074161openalex-snapshot
SINTAX: a simple non-Bayesian taxonomy classifier for 16S and ITS sequences
inferredcites →https://doi.org/10.1101/081257openalex-snapshot
UNOISE2: improved error-correction for Illumina 16S and ITS amplicon sequencing
inferredcites →https://doi.org/10.1101/124149openalex-snapshot
UNBIAS: An attempt to correct abundance bias in 16S sequencing, with limited success
inferredcites →https://doi.org/10.1111/j.1365-2656.2005.00936.xopenalex-snapshot
The lognormal distribution is not an appropriate null hypothesis for the species–abundance distribution
inferredcites →https://doi.org/10.1111/j.1365-2656.2006.01095.xopenalex-snapshot
On plotting species abundance distributions
inferredcites →https://doi.org/10.1111/j.1462-2920.2010.02193.xopenalex-snapshot
Ironing out the wrinkles in the rare biosphere through improved OTU clustering
inferredcites →https://doi.org/10.1126/science.147.3655.250openalex-snapshot
Dominance and Diversity in Land Plant Communities
inferredcites →https://doi.org/10.1146/annurev-pathol-011811-132421openalex-snapshot
Human Microbiome in Health and Disease
inferredcites →https://doi.org/10.1186/s13027-016-0112-7openalex-snapshot
Characterisation of microbial communities within aggressive prostate cancer tissues
inferredcites →https://doi.org/10.1371/journal.pone.0173408openalex-snapshot
Characterization of bacterial community associated with phytoplankton bloom in a eutrophic lake in South Norway using 16S rRNA gene amplicon sequence analysis
inferredcites →https://doi.org/10.1371/journal.pone.0181477openalex-snapshot
Comparative analysis of vaginal microbiota sampling using 16S rRNA gene analysis
inferredcites →https://doi.org/10.2307/1411openalex-snapshot
The Relation Between the Number of Species and the Number of Individuals in a Random Sample of an Animal Population
inferredcites →https://doi.org/10.2307/1930989openalex-snapshot
The Commonness, And Rarity, of Species
inferredcites →https://doi.org/10.2307/2529621openalex-snapshot
On Fitting the Poisson Lognormal Distribution to Species-Abundance Data
inferredcites →https://doi.org/10.5860/choice.42-1547openalex-snapshot
Measuring biological diversity
inferredcites →https://doi.org/10.7717/peerj.3889openalex-snapshot
Accuracy of microbial community diversity estimated by closed- and open-reference OTUs
inferredcites →https://doi.org/10.7717/peerj.545openalex-snapshot
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/s00248-021-01944-zopenalex-snapshot
Microsporidian Infection in Mosquitoes (Culicidae) Is Associated with Gut Microbiome Composition and Predicted Gut Microbiome Functional Content
inferred← citeshttps://doi.org/10.1007/s10393-021-01523-1openalex-snapshot
Metabarcoding of Soil Fungi from Different Urban Greenspaces Around Bournemouth in the UK
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2022.137717openalex-snapshot
Glyphosate versus glyphosate based ionic liquids: Effect of cation on glyphosate biodegradation, soxA and phnJ genes abundance and microbial populations changes during soil bioaugmentation
inferred← citeshttps://doi.org/10.1016/j.envpol.2024.125490openalex-snapshot
Effects of Bti on the diversity and community composition of three Chironomidae subfamilies across different micro-habitats
inferred← citeshttps://doi.org/10.1101/434977openalex-snapshot
Alpha diversity metrics for noisy OTUs
inferred← citeshttps://doi.org/10.1111/1755-0998.13205openalex-snapshot
A new method of metabarcoding Microsporidia and their hosts reveals high levels of microsporidian infections in mosquitoes (Culicidae)
inferred← citeshttps://doi.org/10.1111/mec.15214openalex-snapshot
Mosquito control actions affect chironomid diversity in temporary wetlands of the Upper Rhine Valley
inferred← citeshttps://doi.org/10.1186/s12866-022-02598-8openalex-snapshot
Towards defining the core Saccharum microbiome: input from five genotypes
inferred← citeshttps://doi.org/10.1371/journal.pone.0262039openalex-snapshot
Trophic and symbiotic links between obligate-glacier water bears (Tardigrada) and cryoconite microorganisms
inferred← citeshttps://doi.org/10.21203/rs.3.rs-4462389/v1openalex-snapshot
Characterization of a Native Microbial Consortium from Mining Tailings of the Arequipa Region and its potential application in Biolixiviation
inferred← citeshttps://doi.org/10.3390/ani14111677openalex-snapshot
Simulated Swine Digestion and Gut Microbiota Fermentation of Hydrolyzed Copra Meal
inferred← citeshttps://doi.org/10.3390/ijms22105309openalex-snapshot
Dadaist2: A Toolkit to Automate and Simplify Statistical Analysis and Plotting of Metabarcoding Experiments
inferred← citeshttps://doi.org/10.3390/microorganisms10040817openalex-snapshot
Responses of Soil Microbial Communities and Networks to Precipitation Change in a Typical Steppe Ecosystem of the Loess Plateau
inferred← citeshttps://doi.org/10.3390/microorganisms11051212openalex-snapshot
The Distribution and Influencing Factors of Hypolithic Microbial Communities in the Hexi Corridor
inferred← citeshttps://doi.org/10.70675/0d2d4921z2c39z4b84zb3a5za8f479f89d14openalex-snapshot
Metabarcoding in the abyss : uncovering deep-sea biodiversity through environmental DNA
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