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Epigenetic factors coordinate intestinal development

https://doi.org/10.1101/399410
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/cne.22464openalex-snapshot
Neurochemical coding of enteric neurons in adult and embryonic zebrafish (Danio rerio)
inferredcites →https://doi.org/10.1002/dvdy.21033openalex-snapshot
Genetic screen for mutations affecting development and function of the enteric nervous system
inferredcites →https://doi.org/10.1002/dvdy.22630openalex-snapshot
Gdnf is mitogenic, neurotrophic, and chemoattractive to enteric neural crest cells in the embryonic colon
inferredcites →https://doi.org/10.1002/dvdy.24438openalex-snapshot
Molecular fingerprinting delineates progenitor populations in the developing zebrafish enteric nervous system
inferredcites →https://doi.org/10.1002/dvdy.24597openalex-snapshot
Gut feelings: Studying enteric nervous system development, function, and disease in the zebrafish model system
inferredcites →https://doi.org/10.1007/s00018-015-1997-9openalex-snapshot
Epigenetic regulation of the intestinal epithelium
inferredcites →https://doi.org/10.1016/b978-0-12-387036-0.00006-2openalex-snapshot
Development of the Zebrafish Enteric Nervous System
inferredcites →https://doi.org/10.1016/bs.mcb.2016.02.003openalex-snapshot
Zebrafish as a model for understanding enteric nervous system interactions in the developing intestinal tract
inferredcites →https://doi.org/10.1016/j.cub.2007.12.045openalex-snapshot
Cytosine Methylation: Remaining Faithful
inferredcites →https://doi.org/10.1016/j.devcel.2005.02.015openalex-snapshot
Mutation of Smooth Muscle Myosin Causes Epithelial Invasion and Cystic Expansion of the Zebrafish Intestine
inferredcites →https://doi.org/10.1016/j.mod.2004.10.009openalex-snapshot
Intestinal growth and differentiation in zebrafish
inferredcites →https://doi.org/10.1016/j.semcdb.2017.01.006openalex-snapshot
Enteric nervous system development: A crest cell’s journey from neural tube to colon
inferredcites →https://doi.org/10.1016/j.ydbio.2006.10.017openalex-snapshot
Cell proliferation drives neural crest cell invasion of the intestine
inferredcites →https://doi.org/10.1016/j.ydbio.2008.02.061openalex-snapshot
Endoderm-derived Sonic hedgehog and mesoderm Hand2 expression are required for enteric nervous system development in zebrafish
inferredcites →https://doi.org/10.1016/j.ydbio.2009.07.017openalex-snapshot
Loss of Dnmt1 catalytic activity reveals multiple roles for DNA methylation during pancreas development and regeneration
inferredcites →https://doi.org/10.1016/j.ydbio.2010.11.009openalex-snapshot
Uhrf1 and Dnmt1 are required for development and maintenance of the zebrafish lens
inferredcites →https://doi.org/10.1016/j.ydbio.2016.03.032openalex-snapshot
Clinical aspects of neurointestinal disease: Pathophysiology, diagnosis, and treatment
inferredcites →https://doi.org/10.1016/j.ydbio.2016.05.030openalex-snapshot
Enteric nervous system assembly: Functional integration within the developing gut
inferredcites →https://doi.org/10.1016/j.ydbio.2016.06.017openalex-snapshot
Epigenetics in ENS development and Hirschsprung disease
inferredcites →https://doi.org/10.1016/j.ydbio.2016.07.008openalex-snapshot
Genetics of enteric neuropathies
inferredcites →https://doi.org/10.1016/s0091-679x(04)77001-6openalex-snapshot
Retroviral-Mediated Insertional Mutagenesis in Zebrafish
inferredcites →https://doi.org/10.1016/s0959-440x(96)80060-1openalex-snapshot
The RING finger domain: a recent example of a sequence—structure family
inferredcites →https://doi.org/10.1038/35049533openalex-snapshot
DNA methylation in health and disease
inferredcites →https://doi.org/10.1038/gim.2014.17openalex-snapshot
Involvement of DNMT3B in the pathogenesis of Hirschsprung disease and its possible role as a regulator of neurogenesis in the human enteric nervous system
inferredcites →https://doi.org/10.1038/nature06397openalex-snapshot
The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA
inferredcites →https://doi.org/10.1038/nature08683openalex-snapshot
DNMT1 maintains progenitor function in self-renewing somatic tissue
inferredcites →https://doi.org/10.1038/nature12111openalex-snapshot
The zebrafish reference genome sequence and its relationship to the human genome
inferredcites →https://doi.org/10.1038/nrgastro.2012.221openalex-snapshot
The digestive neuronal–glial–epithelial unit: a new actor in gut health and disease
inferredcites →https://doi.org/10.1038/nrgastro.2017.149openalex-snapshot
Hirschsprung disease — integrating basic science and clinical medicine to improve outcomes
inferredcites →https://doi.org/10.1038/s41419-018-0495-zopenalex-snapshot
DNA methylation, through DNMT1, has an essential role in the development of gastrointestinal smooth muscle cells and disease
inferredcites →https://doi.org/10.1038/s41598-018-24768-3openalex-snapshot
Enteric Nervous System Regulation of Intestinal Stem Cell Differentiation and Epithelial Monolayer Function
inferredcites →https://doi.org/10.1073/pnas.0610774104openalex-snapshot
Liver growth in the embryo and during liver regeneration in zebrafish requires the cell cycle regulator, uhrf1
inferredcites →https://doi.org/10.1073/pnas.1000072107openalex-snapshot
Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88
inferredcites →https://doi.org/10.1073/pnas.1424089112openalex-snapshot
Epigenetic control of intestinal barrier function and inflammation in zebrafish
inferredcites →https://doi.org/10.1074/jbc.m205189200openalex-snapshot
Targeted Disruption of Np95 Gene Renders Murine Embryonic Stem Cells Hypersensitive to DNA Damaging Agents and DNA Replication Blocks
inferredcites →https://doi.org/10.1083/jcb.200401077openalex-snapshot
Sonic hedgehog regulates the proliferation, differentiation, and migration of enteric neural crest cells in gut
inferredcites →https://doi.org/10.1093/bioinformatics/btq057openalex-snapshot
Fast and SNP-tolerant detection of complex variants and splicing in short reads
inferredcites →https://doi.org/10.1093/hmg/9.16.2395openalex-snapshot
The DNA methyltransferases of mammals
inferredcites →https://doi.org/10.1101/gad.230318.113openalex-snapshot
DNA methylation is required for the control of stem cell differentiation in the small intestine
inferredcites →https://doi.org/10.1111/j.1440-169x.2007.00929.xopenalex-snapshot
Mathematical and experimental insights into the development of the enteric nervous system and Hirschsprung's Disease
inferredcites →https://doi.org/10.1111/joa.12583openalex-snapshot
Intestinal smooth muscle is required for patterning the enteric nervous system
inferredcites →https://doi.org/10.1111/mec.12330openalex-snapshot
The population structure and recent colonization history of O regon threespine stickleback determined using restriction‐site associated DNA ‐sequencing
inferredcites →https://doi.org/10.1111/pin.12230openalex-snapshot
Gastrointestinal stromal tumor: Recent advances in pathology and genetics
inferredcites →https://doi.org/10.1126/science.1147939openalex-snapshot
UHRF1 Plays a Role in Maintaining DNA Methylation in Mammalian Cells
inferredcites →https://doi.org/10.1126/science.1708527openalex-snapshot
Determination of Primary Motoneuron Identity in Developing Zebrafish Embryos
inferredcites →https://doi.org/10.1128/mcb.00312-06openalex-snapshot
Zebra Fish Dnmt1 and Suv39h1 Regulate Organ-Specific Terminal Differentiation during Development
inferredcites →https://doi.org/10.1146/annurev.cellbio.042308.113344openalex-snapshot
Vertebrate Endoderm Development and Organ Formation
inferredcites →https://doi.org/10.1152/ajpgi.00276.2005openalex-snapshot
Enteric glia inhibit intestinal epithelial cell proliferation partly through a TGF-β1-dependent pathway
inferredcites →https://doi.org/10.1152/ajpgi.00452.2012openalex-snapshot
Enteric nervous system development: migration, differentiation, and disease
inferredcites →https://doi.org/10.1159/000452793openalex-snapshot
Differential Clonal Expansion in an Invading Cell Population: Clonal Advantage or Dumb Luck?
inferredcites →https://doi.org/10.1172/jci76303openalex-snapshot
Emerging roles for enteric glia in gastrointestinal disorders
inferredcites →https://doi.org/10.1186/1749-8104-7-35openalex-snapshot
Zebrafish Mnx proteins specify one motoneuron subtype and suppress acquisition of interneuron characteristics
inferredcites →https://doi.org/10.1186/gb-2007-8-6-r105openalex-snapshot
RAD marker microarrays enable rapid mapping of zebrafish mutations
inferredcites →https://doi.org/10.1186/s13045-015-0115-7openalex-snapshot
DNA methyltransferase 1 functions through C/ebpa to maintain hematopoietic stem and progenitor cells in zebrafish
inferredcites →https://doi.org/10.1242/dev.00912openalex-snapshot
Roles for GFRα1 receptors in zebrafish enteric nervous system development
inferredcites →https://doi.org/10.1242/dev.02215openalex-snapshot
lessenencodes a zebrafishtrap100required for enteric nervous system development
inferredcites →https://doi.org/10.1242/dev.02749openalex-snapshot
Specification of epibranchial placodes in zebrafish
inferredcites →https://doi.org/10.1242/dev.115980openalex-snapshot
DNA hypomethylation induces a DNA replication-associated cell cycle arrest to block hepatic outgrowth in uhrf1 mutant zebrafish embryos
inferredcites →https://doi.org/10.1242/dev.117341openalex-snapshot
Dnmt1 is essential to maintain progenitors in the perinatal intestinal epithelium
inferredcites →https://doi.org/10.1242/dev.124.3.713openalex-snapshot
Notochord alters the permissiveness of myotome for pathfinding by an identified motoneuron in embryonic zebrafish
inferredcites →https://doi.org/10.1242/dev.126.4.827openalex-snapshot
Origin and development of the zebrafish endoderm
inferredcites →https://doi.org/10.1242/dev.127.9.1971openalex-snapshot
The concentric structure of the developing gut is regulated by Sonic hedgehog derived from endodermal epithelium
inferredcites →https://doi.org/10.1242/dev.129.22.5151openalex-snapshot
Requirement of signalling by receptor tyrosine kinase RET for the directed migration of enteric nervous system progenitor cells during mammalian embryogenesis
inferredcites →https://doi.org/10.1242/dev.133926openalex-snapshot
An exclusive cellular and molecular network governs intestinal smooth muscle cell differentiation in vertebrates
inferredcites →https://doi.org/10.1371/journal.pbio.2000689openalex-snapshot
The enteric nervous system promotes intestinal health by constraining microbiota composition
inferredcites →https://doi.org/10.1371/journal.pgen.1000862openalex-snapshot
Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags
inferredcites →https://doi.org/10.1371/journal.pone.0003376openalex-snapshot
Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
inferredcites →https://doi.org/10.1371/journal.pone.0025174openalex-snapshot
Aebp2 as an Epigenetic Regulator for Neural Crest Cells
inferredcites →https://doi.org/10.1371/journal.pone.0063218openalex-snapshot
Distinct Functional and Temporal Requirements for Zebrafish Hdac1 during Neural Crest-Derived Craniofacial and Peripheral Neuron Development
inferredcites →https://doi.org/10.1534/g3.111.000240openalex-snapshot
Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences
inferredcites →https://doi.org/10.1534/genetics.111.127324openalex-snapshot
Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/b978-0-12-816363-4.00011-0openalex-snapshot
Nonmammalian model organisms in epigenetic research
inferred← citeshttps://doi.org/10.13040/ijpsr.0975-8232.14(12).5565-77openalex-snapshot
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