On the public citation graph

Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88

0 signed · 306 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/dvdy.10407openalex-snapshot

Histology‐based screen for zebrafish mutants with abnormal cell differentiation

inferredcites →https://doi.org/10.1006/dbio.2001.0515openalex-snapshot

A Transgenic Lef1/β-Catenin-Dependent Reporter Is Expressed in Spatially Restricted Domains throughout Zebrafish Development

inferredcites →https://doi.org/10.1016/0016-5085(94)90526-6openalex-snapshot

Microflora modulates endocrine cells in the gastrointestinal mucosa of the rat

inferredcites →https://doi.org/10.1016/j.ceb.2007.02.007openalex-snapshot

Wnt/β-catenin signaling in cancer stemness and malignant behavior

inferredcites →https://doi.org/10.1016/j.cell.2004.07.002openalex-snapshot

Recognition of Commensal Microflora by Toll-Like Receptors Is Required for Intestinal Homeostasis

inferredcites →https://doi.org/10.1016/j.cell.2006.08.043openalex-snapshot

Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-free Recipients Reveal Host Habitat Selection

inferredcites →https://doi.org/10.1016/j.cell.2009.01.015openalex-snapshot

Genetic Interaction of PGE2 and Wnt Signaling Regulates Developmental Specification of Stem Cells and Regeneration

inferredcites →https://doi.org/10.1016/j.cell.2010.01.025openalex-snapshot

Immunity, Inflammation, and Cancer

inferredcites →https://doi.org/10.1016/j.chom.2007.10.010openalex-snapshot

Intestinal Alkaline Phosphatase Detoxifies Lipopolysaccharide and Prevents Inflammation in Zebrafish in Response to the Gut Microbiota

inferredcites →https://doi.org/10.1016/j.femsle.2005.01.029openalex-snapshot

Sporadic colorectal cancer – role of the commensal microbiota

inferredcites →https://doi.org/10.1016/j.mod.2004.10.009openalex-snapshot

Intestinal growth and differentiation in zebrafish

inferredcites →https://doi.org/10.1016/j.modgep.2005.02.008openalex-snapshot

Characterization and expression pattern of zebrafish anti-Müllerian hormone (amh) relative to sox9a, sox9b, and cyp19a1a, during gonad development

inferredcites →https://doi.org/10.1016/j.molimm.2003.10.001openalex-snapshot

Toll-like receptor gene family and TIR-domain adapters in Danio rerio

inferredcites →https://doi.org/10.1016/j.molimm.2003.10.003openalex-snapshot

Expression analysis of the Toll-like receptor and TIR domain adaptor families of zebrafish

inferredcites →https://doi.org/10.1016/j.resmic.2006.10.005openalex-snapshot

We know you are in there: Conversing with the indigenous gut microbiota

inferredcites →https://doi.org/10.1016/j.ydbio.2005.07.013openalex-snapshot

Formation of the digestive system in zebrafish: III. Intestinal epithelium morphogenesis

inferredcites →https://doi.org/10.1016/j.ydbio.2006.05.006openalex-snapshot

Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation

inferredcites →https://doi.org/10.1016/s0092-8674(02)01014-0openalex-snapshot

The β-Catenin/TCF-4 Complex Imposes a Crypt Progenitor Phenotype on Colorectal Cancer Cells

inferredcites →https://doi.org/10.1016/s0925-4773(02)00180-6openalex-snapshot

Expression and splice variant analysis of the zebrafish tcf4 transcription factor

inferredcites →https://doi.org/10.1016/s1534-5807(04)00063-2openalex-snapshot

Fibronectin Regulates Epithelial Organization during Myocardial Migration in Zebrafish

inferredcites →https://doi.org/10.1038/1270openalex-snapshot

Depletion of epithelial stem-cell compartments in the small intestine of mice lacking Tcf-4

inferredcites →https://doi.org/10.1038/mi.2008.49openalex-snapshot

Innate immune recognition of the indigenous microbial flora

inferredcites →https://doi.org/10.1038/ni1079openalex-snapshot

Getting a grip on things: how do communities of bacterial symbionts become established in our intestine?

inferredcites →https://doi.org/10.1038/nri2707openalex-snapshot

Toll-like receptor signalling in the intestinal epithelium: how bacterial recognition shapes intestinal function

inferredcites →https://doi.org/10.1038/sj.emboj.7601867openalex-snapshot

Commensal bacteria modulate cullin‐dependent signaling via generation of reactive oxygen species

inferredcites →https://doi.org/10.1038/sj.embor.7400638openalex-snapshot

Adenomatous polyposis coli‐deficient zebrafish are susceptible to digestive tract neoplasia

inferredcites →https://doi.org/10.1038/sj.embor.7401071openalex-snapshot

T‐cell factor 4 (Tcf7l2) maintains proliferative compartments in zebrafish intestine

inferredcites →https://doi.org/10.1073/pnas.0400706101openalex-snapshot

Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota

inferredcites →https://doi.org/10.1073/pnas.0405979102openalex-snapshot

Activated macrophages are an adaptive element of the colonic epithelial progenitor niche necessary for regenerative responses to injury

inferredcites →https://doi.org/10.1073/pnas.0504927102openalex-snapshot

Activation of β-catenin by carcinogenic Helicobacter pylori

inferredcites →https://doi.org/10.1073/pnas.2536800100openalex-snapshot

Essential requirement for Wnt signaling in proliferation of adult small intestine and colon revealed by adenoviral expression of Dickkopf-1

inferredcites →https://doi.org/10.1073/pnas.93.16.8455openalex-snapshot

A molecular mechanism for the effect of lithium on development.

inferredcites →https://doi.org/10.1083/jcb.200311021openalex-snapshot

SOX9 is an intestine crypt transcription factor, is regulated by the Wnt pathway, and represses the CDX2 and MUC2 genes

inferredcites →https://doi.org/10.1089/zeb.2009.0580openalex-snapshot

T-Cell Factor 4 (tcf7l2) Is the Main Effector of Wnt Signaling During Zebrafish Intestine Organogenesis

inferredcites →https://doi.org/10.1089/zeb.2009.0617openalex-snapshot

Fishing for Intestinal Cancer Models: Unraveling Gastrointestinal Homeostasis and Tumorigenesis in Zebrafish

inferredcites →https://doi.org/10.1101/gad.194301openalex-snapshot

A mutation in the Gsk3–binding domain of zebrafish Masterblind/Axin1 leads to a fate transformation of telencephalon and eyes to diencephalon

inferredcites →https://doi.org/10.1101/gad.267103openalex-snapshot

Canonical Wnt signals are essential for homeostasis of the intestinal epithelium

inferredcites →https://doi.org/10.1111/j.1365-3083.2003.01346.xopenalex-snapshot

Normal Development of the Gut‐Associated Lymphoid Tissue Except Peyer's Patch in MyD88‐Deficient Mice

inferredcites →https://doi.org/10.1111/j.1462-5822.2007.01071.xopenalex-snapshot

MyD88 signalling plays a critical role in host defence by controlling pathogen burden and promoting epithelial cell homeostasis during Citrobacter rodentium-induced colitis

inferredcites →https://doi.org/10.1126/science.1140488openalex-snapshot

Regulation of Spontaneous Intestinal Tumorigenesis Through the Adaptor Protein MyD88

inferredcites →https://doi.org/10.1126/science.1350108openalex-snapshot

Multiple Intestinal Neoplasia Caused by a Mutation in the Murine Homolog of the APC Gene

inferredcites →https://doi.org/10.1128/iai.67.1.1-7.1999openalex-snapshot

Symbiosis of Aeromonas veronii Biovar sobria and Hirudo medicinalis , the Medicinal Leech: a Novel Model for Digestive Tract Associations

inferredcites →https://doi.org/10.1128/iai.74.4.2436-2441.2006openalex-snapshot

MyD88 Innate Immune Function in a Zebrafish Embryo Infection Model

inferredcites →https://doi.org/10.1146/annurev.physiol.010908.163145openalex-snapshot

Stem Cells, Self-Renewal, and Differentiation in the Intestinal Epithelium

inferredcites →https://doi.org/10.1172/jci32453openalex-snapshot

Blocking TNF-α in mice reduces colorectal carcinogenesis associated with chronic colitis

inferredcites →https://doi.org/10.1189/jlb.0708405openalex-snapshot

Transgenic zebrafish reporter lines reveal conserved Toll-like receptor signaling potential in embryonic myeloid leukocytes and adult immune cell lineages

inferredcites →https://doi.org/10.1242/dev.01644openalex-snapshot

Delta-Notch signalling controls commitment to a secretory fate in the zebrafish intestine

inferredcites →https://doi.org/10.1242/dev.01674openalex-snapshot

A pair of Sox: distinct and overlapping functions of zebrafish sox9 co-orthologs in craniofacial and pectoral fin development

inferredcites →https://doi.org/10.1242/dev.02295openalex-snapshot

Essential and opposing roles of zebrafish β-catenins in the formation of dorsal axial structures and neurectoderm

inferredcites →https://doi.org/10.1242/dev.128.20.3877openalex-snapshot

Ectopic Wnt signal determines the eyeless phenotype of zebrafishmasterblindmutant

inferredcites →https://doi.org/10.4049/jimmunol.0803285openalex-snapshot

The Gene History of Zebrafish tlr4a and tlr4b Is Predictive of Their Divergent Functions

inferredcites →https://doi.org/10.4049/jimmunol.179.1.566openalex-snapshot

TLR Signaling Mediated by MyD88 Is Required for a Protective Innate Immune Response by Neutrophils to Citrobacter rodentium

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4633220openalex-extracted

inferred← citeshttps://doi.org/10.2139/ssrn.4767256openalex-extracted

Oxidative Damage and Intestinal Microbial Imbalance Induced by Polystyrene Microplastics and Cadmium in Zebrafish (Danio Rerio)

inferred← citeshttps://doi.org/10.1002/9781118409855.ch11openalex-snapshot

Insights into the Human Microbiome from Animal Models

inferred← citeshttps://doi.org/10.1002/biof.1796openalex-snapshot

Transplantation of high fat fed mouse microbiota into zebrafish larvae identifies MyD88 ‐dependent acceleration of hyperlipidaemia by Gram‐positive cell wall components

inferred← citeshttps://doi.org/10.1002/cphy.c210052openalex-snapshot

Microbiome in Colonic Carcinogenesis

inferred← citeshttps://doi.org/10.1002/edn3.513openalex-snapshot

A zebrafish model to elucidate the impact of host genes on the microbiota

inferred← citeshttps://doi.org/10.1002/etc.5054openalex-snapshot

Chronic Embryo-Larval Exposure of Fathead Minnows to the Pharmaceutical Drug Metformin: Survival, Growth, and Microbiome Responses

inferred← citeshttps://doi.org/10.1002/j.2040-4603.2023.tb00265.xopenalex-snapshot

Microbiome in Colonic Carcinogenesis

inferred← citeshttps://doi.org/10.1002/jcp.29492openalex-snapshot

Wnt/β‐catenin‐mediated heat exposure inhibits intestinal epithelial cell proliferation and stem cell expansion through endoplasmic reticulum stress

inferred← citeshttps://doi.org/10.1002/mbo3.1250openalex-snapshot

Distinct microbiota assembly mechanisms revealed in different reconstruction stages during gut regeneration in the sea cucumber Apostichopus japonicus

inferred← citeshttps://doi.org/10.1007/978-1-4614-0106-3_15openalex-snapshot

Zebrafish: Model for the Study of Inflammation and the Innate Immune Response to Infectious Diseases

inferred← citeshttps://doi.org/10.1007/978-3-030-85420-1_12openalex-snapshot

Mucosal Immunity in Fish

inferred← citeshttps://doi.org/10.1007/978-3-030-91051-8_6openalex-snapshot

The Impacts of Microbiota on Animal Development and Physiology

inferred← citeshttps://doi.org/10.1007/978-3-031-66822-7_12openalex-snapshot

Amazonian Fish and Their Bacterial Symbionts: An Intricate Co-Dependence Relationship in a Changing Environment

inferred← citeshttps://doi.org/10.1007/978-3-031-92858-1_19openalex-snapshot

Impact of Gut Microbiota on Fish Nutrition and Health

inferred← citeshttps://doi.org/10.1007/978-3-319-30654-4_18openalex-snapshot

Focusing the Spotlight on the Zebrafish Intestine to Illuminate Mechanisms of Colorectal Cancer

inferred← citeshttps://doi.org/10.1007/978-3-642-21680-0_23openalex-snapshot

Hydra Go Bacterial

inferred← citeshttps://doi.org/10.1007/978-981-16-5195-3_20openalex-snapshot

Metagenomic Approaches to Identify Fish Gut Microbiome and the Effect of Prebiotic Supplements on Gut Microbes and Health Management

inferred← citeshttps://doi.org/10.1007/978-981-99-0852-3_1openalex-snapshot

Introduction to Finfish Microbiome and Its Importance

inferred← citeshttps://doi.org/10.1007/s00223-017-0368-yopenalex-snapshot

Gut Microbiota and Host Juvenile Growth

inferred← citeshttps://doi.org/10.1007/s10499-025-01993-yopenalex-snapshot

Fish as biological models: Implications for gut microbiota research in biomedical and aquaculture sciences

inferred← citeshttps://doi.org/10.1007/s11888-018-0416-7openalex-snapshot

Microbiome and Colorectal Cancer

inferred← citeshttps://doi.org/10.1007/s40139-018-0163-0openalex-snapshot

Racing to Stay Put: How Resident Microbiota Stimulate Intestinal Epithelial Cell Proliferation

inferred← citeshttps://doi.org/10.1007/s44272-024-00023-xopenalex-snapshot

MyD88's function in the emergence and growth of tumors

inferred← citeshttps://doi.org/10.1016/b978-0-12-381320-6.00004-7openalex-snapshot

Study of Host–Microbe Interactions in Zebrafish

inferred← citeshttps://doi.org/10.1016/b978-0-12-381320-6.00012-6openalex-snapshot

Infectious Disease Modeling and Innate Immune Function in Zebrafish Embryos

inferred← citeshttps://doi.org/10.1016/b978-0-12-417186-2.00006-6openalex-snapshot

Fish mucosal immunity: intestine

inferred← citeshttps://doi.org/10.1016/b978-0-12-812431-4.00013-0openalex-snapshot

It Takes Guts

inferred← citeshttps://doi.org/10.1016/b978-0-12-812431-4.00048-8openalex-snapshot

Zebrafish as a Model for Investigating Animal–Microbe Interactions

inferred← citeshttps://doi.org/10.1016/b978-0-323-95377-1.00010-2openalex-snapshot

Gut microbiota of sea cucumbers, with a focus on Apostichopus japonicus

inferred← citeshttps://doi.org/10.1016/b978-0-443-21556-8.00013-2openalex-snapshot

The importance of gut microbes for nutrition and health

inferred← citeshttps://doi.org/10.1016/b978-0-443-26771-0.00022-9openalex-snapshot

Diversity and bioprospecting of marine fish gut associated microbes

inferred← citeshttps://doi.org/10.1016/bs.ctdb.2020.11.007openalex-snapshot

Animal development in the microbial world: Re-thinking the conceptual framework

inferred← citeshttps://doi.org/10.1016/bs.ctdb.2023.01.001openalex-snapshot

Role of Wnt signaling in the maintenance and regeneration of the intestinal epithelium

inferred← citeshttps://doi.org/10.1016/bs.mcb.2016.11.005openalex-snapshot

Best practices for germ-free derivation and gnotobiotic zebrafish husbandry

inferred← citeshttps://doi.org/10.1016/bs.mcb.2016.11.006openalex-snapshot

Modeling intestinal disorders using zebrafish

inferred← citeshttps://doi.org/10.1016/j.ajpath.2013.11.029openalex-snapshot

Gut Commensal Bacteria and Regional Wnt Gene Expression in the Proximal Versus Distal Colon

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2019.734800openalex-snapshot

Gnotobiotic models: Powerful tools for deeply understanding intestinal microbiota-host interactions in aquaculture

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2021.736544openalex-snapshot

Effects of deoxynivalenol-contaminated diet on the composition and diversity of the intestinal microbial community and intestinal ultrastructure of juvenile largemouth bass (Micropterus salmoides)

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2022.738521openalex-snapshot

Influences of the alcoholic extract of Artemisia annua on gastrointestinal microbiota and performance of Nile tilapia

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2022.738796openalex-snapshot

Effects of fecal bacteria on growth, digestive capacity, antioxidant capacity, intestinal health of large yellow croaker (Larimichthys crocea) larvae

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.740557openalex-snapshot

Evaluation of a live attenuated vaccine against Edwardsiella piscicida by 16S rRNA sequencing

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.740924openalex-snapshot

Intestinal microbiota protects Vibrio splendidus induced intestinal epithelium damage by inhibiting apoptosis and promoting proliferation in Apostichopus japonicus

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.741696openalex-snapshot

The impact of host genetics on microbe assemblages in three types of mrigal carp (Cirrhinus mrigala)

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.741752openalex-snapshot

Comparative analysis of Seabuckthorn and its significant component in enhancing fish mucosal immunity

inferred← citeshttps://doi.org/10.1016/j.aquatox.2017.12.013openalex-snapshot

Toxicokinetic and toxicodynamic of depleted uranium in the zebrafish, Danio rerio

inferred← citeshttps://doi.org/10.1016/j.aquatox.2024.106879openalex-snapshot

The toxicity of polystyrene micro- and nano-plastics on rare minnow (Gobiocypris rarus) varies with the particle size and concentration

inferred← citeshttps://doi.org/10.1016/j.canlet.2021.10.034openalex-snapshot

Wnt signaling pathway in cancer immunotherapy

inferred← citeshttps://doi.org/10.1016/j.cell.2012.11.026openalex-snapshot

β-Catenin-Driven Cancers Require a YAP1 Transcriptional Complex for Survival and Tumorigenesis

inferred← citeshttps://doi.org/10.1016/j.celrep.2014.04.013openalex-snapshot

Cadm4 Restricts the Production of Cardiac Outflow Tract Progenitor Cells

inferred← citeshttps://doi.org/10.1016/j.celrep.2018.09.025openalex-snapshot

Critical Role for a Subset of Intestinal Macrophages in Shaping Gut Microbiota in Adult Zebrafish

inferred← citeshttps://doi.org/10.1016/j.celrep.2022.110311openalex-snapshot

A cell atlas of microbe-responsive processes in the zebrafish intestine

inferred← citeshttps://doi.org/10.1016/j.celrep.2022.111416openalex-snapshot

Bacillus subtilis programs the differentiation of intestinal secretory lineages to inhibit Salmonella infection

inferred← citeshttps://doi.org/10.1016/j.celrep.2023.112095openalex-snapshot

Cell-type-specific responses to the microbiota across all tissues of the larval zebrafish

inferred← citeshttps://doi.org/10.1016/j.celrep.2023.113407openalex-snapshot

Single-cell resolution of the adult zebrafish intestine under conventional conditions and in response to an acute Vibrio cholerae infection

inferred← citeshttps://doi.org/10.1016/j.celrep.2024.113750openalex-snapshot

Vibrio cholerae arrests intestinal epithelial proliferation through T6SS-dependent activation of the bone morphogenetic protein pathway

inferred← citeshttps://doi.org/10.1016/j.chemosphere.2019.07.065openalex-snapshot

Accumulation of different shapes of microplastics initiates intestinal injury and gut microbiota dysbiosis in the gut of zebrafish

inferred← citeshttps://doi.org/10.1016/j.chom.2012.08.003openalex-snapshot

Microbiota Regulate Intestinal Absorption and Metabolism of Fatty Acids in the Zebrafish

inferred← citeshttps://doi.org/10.1016/j.cmet.2017.02.001openalex-snapshot

Integrative Physiology: At the Crossroads of Nutrition, Microbiota, Animal Physiology, and Human Health

inferred← citeshttps://doi.org/10.1016/j.dci.2016.02.020openalex-snapshot

The zebrafish as a model to study intestinal inflammation

inferred← citeshttps://doi.org/10.1016/j.dci.2020.103989openalex-snapshot

Skin damage caused by scale loss modifies the intestine of chronically stressed gilthead sea bream (Sparus aurata, L.)

inferred← citeshttps://doi.org/10.1016/j.dci.2021.104111openalex-snapshot

M. fortuitum-induced CNS-pathology: Deciphering the role of canonical Wnt signaling, blood brain barrier components and cytokines

inferred← citeshttps://doi.org/10.1016/j.envint.2024.108483openalex-snapshot

Photoaging of biodegradable nanoplastics regulates their toxicity to aquatic insects (Chironomus kiinensis) by impairing gut and disrupting intestinal microbiota

inferred← citeshttps://doi.org/10.1016/j.envpol.2021.116767openalex-snapshot

Combined effects of polyethylene and organic contaminant on zebrafish (Danio rerio): Accumulation of 9-Nitroanthracene, biomarkers and intestinal microbiota

inferred← citeshttps://doi.org/10.1016/j.envpol.2021.117039openalex-snapshot

Effects of polyethylene microplastics on the microbiome and metabolism in larval zebrafish

inferred← citeshttps://doi.org/10.1016/j.envres.2022.114202openalex-snapshot

Exploring the interactions between the gut microbiome and the shifting surrounding aquatic environment in fisheries and aquaculture: A review

inferred← citeshttps://doi.org/10.1016/j.fbio.2021.101097openalex-snapshot

The therapeutic effect of potentially probiotic Lactobacillus paracasei on dimethylhydrazine induced colorectal cancer in rats

inferred← citeshttps://doi.org/10.1016/j.freeradbiomed.2012.10.554openalex-snapshot

Role of oxygen gradients in shaping redox relationships between the human intestine and its microbiota

inferred← citeshttps://doi.org/10.1016/j.fsi.2013.09.032openalex-snapshot

The mucosal immune system of fish: The evolution of tolerating commensals while fighting pathogens

inferred← citeshttps://doi.org/10.1016/j.fsi.2022.06.049openalex-snapshot

Application of potential probiotic strain Streptomyces sp. SH5 on anti-Aeromonas infection in zebrafish larvae

inferred← citeshttps://doi.org/10.1016/j.fsi.2024.109460openalex-snapshot

Damage of polyethylene microplastics on the intestine multilayer barrier, blood cell immune function and the repair effect of Leuconostoc mesenteroides DH in the large-scale loach (Paramisgurnus dabryanus)

inferred← citeshttps://doi.org/10.1016/j.fsi.2024.109516openalex-snapshot

Differential tissue immune stimulation through immersion in bacterial and viral agonists in the Antarctic Notothenia rossii

inferred← citeshttps://doi.org/10.1016/j.heliyon.2023.e15104openalex-snapshot

Microplastics and their interactions with microbiota

inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2024.134346openalex-snapshot

Xylooligosaccharides alleviate the carbohydrate-enriched diet-induced intestinal barrier dysfunction in carp Megalobrama amblycephala by promoting intestinal development, immunity and gut microbiota

inferred← citeshttps://doi.org/10.1016/j.jcmgh.2022.04.013openalex-snapshot

Transcriptional Integration of Distinct Microbial and Nutritional Signals by the Small Intestinal Epithelium

inferred← citeshttps://doi.org/10.1016/j.jhazmat.2021.127003openalex-snapshot

Parental exposure to sulfamethazine and nanoplastics alters the gut microbial communities in the offspring of marine madaka (Oryzias melastigma)

inferred← citeshttps://doi.org/10.1016/j.jhazmat.2024.133604openalex-snapshot

Plastic food? Energy compensation of zebrafish (Danio rerio) after long-term exposure to polylactic acid biomicroplastics

inferred← citeshttps://doi.org/10.1016/j.jhazmat.2024.134478openalex-snapshot

Interactions between intestinal microbiota and metabolites in zebrafish larvae exposed to polystyrene nanoplastics: Implications for intestinal health and glycolipid metabolism

inferred← citeshttps://doi.org/10.1016/j.medmic.2021.100042openalex-snapshot

Zebrafish model for human gut microbiome-related studies: advantages and limitations

inferred← citeshttps://doi.org/10.1016/j.mib.2017.05.011openalex-snapshot

The scales of the zebrafish: host–microbiota interactions from proteins to populations

inferred← citeshttps://doi.org/10.1016/j.mib.2017.06.009openalex-snapshot

Eco-Aging: stem cells and microbes are controlled by aging antagonist FoxO

inferred← citeshttps://doi.org/10.1016/j.mib.2020.01.012openalex-snapshot

Patterns of partnership: surveillance and mimicry in host-microbiota mutualisms

inferred← citeshttps://doi.org/10.1016/j.micinf.2020.10.009openalex-snapshot

Sending signals – The microbiota’s contribution to intestinal epithelial homeostasis

inferred← citeshttps://doi.org/10.1016/j.molimm.2014.02.002openalex-snapshot

A Wnt/β-catenin negative feedback loop represses TLR-triggered inflammatory responses in alveolar epithelial cells

inferred← citeshttps://doi.org/10.1016/j.nut.2018.07.017openalex-snapshot

Probiotic and synbiotic therapy in the critically ill: State of the art

inferred← citeshttps://doi.org/10.1016/j.rvsc.2021.11.005openalex-snapshot

Specific Pathogen Free – A review of strategies in agriculture, aquaculture, and laboratory mammals and how they inform new recommendations for laboratory zebrafish

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.173178openalex-snapshot

Nanoplastic pollution changes the intestinal microbiome but not the morphology or behavior of a freshwater turtle

inferred← citeshttps://doi.org/10.1016/j.stemcr.2025.102788openalex-snapshot

Microbiota from young mice restore the function of aged ISCs

inferred← citeshttps://doi.org/10.1016/j.surg.2016.10.033openalex-snapshot

Intestinal adaptation in proximal and distal segments: Two epithelial responses diverge after intestinal separation

inferred← citeshttps://doi.org/10.1016/j.tim.2011.07.006openalex-snapshot

Combined phylogenetic and genomic approaches for the high-throughput study of microbial habitat adaptation

inferred← citeshttps://doi.org/10.1016/j.tplants.2016.01.013openalex-snapshot

Beneficial Microbes Affect Endogenous Mechanisms Controlling Root Development

inferred← citeshttps://doi.org/10.1016/j.ydbio.2019.08.002openalex-snapshot

Epigenetic factors Dnmt1 and Uhrf1 coordinate intestinal development

inferred← citeshttps://doi.org/10.1016/j.ydbio.2019.08.005openalex-snapshot

A novel group of secretory cells regulates development of the immature intestinal stem cell niche through repression of the main signaling pathways driving proliferation

inferred← citeshttps://doi.org/10.1016/j.ygeno.2020.09.017openalex-snapshot

Quantitative microbiome profiling links microbial community variation to the intestine regeneration rate of the sea cucumber Apostichopus japonicus

inferred← citeshttps://doi.org/10.1016/s0001-4079(19)30205-5openalex-snapshot

Microbiote et régénération de l’épithélium intestinal : des signaux cryptiques décryptés dans la crypte

inferred← citeshttps://doi.org/10.1021/acs.est.3c02144openalex-snapshot

Differentially Charged Nanoplastics Induce Distinct Effects on the Growth and Gut of Benthic Insects (Chironomus kiinensis) via Charge-Specific Accumulation and Perturbation of the Gut Microbiota

inferred← citeshttps://doi.org/10.1021/acsnano.3c12009openalex-snapshot

Nanoplastics Affect the Bioaccumulation and Gut Toxicity of Emerging Perfluoroalkyl Acid Alternatives to Aquatic Insects (Chironomus kiinensis): Importance of Plastic Surface Charge

inferred← citeshttps://doi.org/10.1038/ismej.2011.38openalex-snapshot

Evidence for a core gut microbiota in the zebrafish

inferred← citeshttps://doi.org/10.1038/ncomms5500openalex-snapshot

Individual diet has sex-dependent effects on vertebrate gut microbiota

inferred← citeshttps://doi.org/10.1038/s12276-021-00571-5openalex-snapshot

Zebrafish as an animal model for biomedical research

inferred← citeshttps://doi.org/10.1038/s41396-020-00807-8openalex-snapshot

Mining zebrafish microbiota reveals key community-level resistance against fish pathogen infection

inferred← citeshttps://doi.org/10.1038/s41467-018-06658-4openalex-snapshot

Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88

inferred← citeshttps://doi.org/10.1038/s41575-020-00357-6openalex-snapshot

Transcriptional programmes underlying cellular identity and microbial responsiveness in the intestinal epithelium

inferred← citeshttps://doi.org/10.1038/s41684-020-0573-6openalex-snapshot

Zebrafish microbiome studies make waves

inferred← citeshttps://doi.org/10.1039/d5en00083aopenalex-snapshot

Interactive toxicity of non-/biodegradable NPs and butyl methoxydibenzoyl methane on intestinal health and metabolism of zebrafish

inferred← citeshttps://doi.org/10.1039/d6an00088fopenalex-snapshot

A metaproteomic platform for integrated host-pathogen-microbiota profiling in zebrafish larvae

inferred← citeshttps://doi.org/10.1042/bst20221375openalex-snapshot

Mechanisms of epithelial growth and development in the zebrafish intestine

inferred← citeshttps://doi.org/10.1051/medsci/20163211014openalex-snapshot

Le dialogue microbiote-cellules souches

inferred← citeshttps://doi.org/10.1055/s-0038-1672197openalex-snapshot

Immune and Antioxidant Enzyme Response of Longfin Yellowtail (Seriola rivoliana) Juveniles to Ultra-diluted Substances Derived from Phosphorus, Silica and Pathogenic Vibrio

inferred← citeshttps://doi.org/10.1073/pnas.1209920109openalex-snapshot

Regulation of immunity and disease resistance by commensal microbes and chromatin modifications during zebrafish development

inferred← citeshttps://doi.org/10.1073/pnas.1218525110openalex-snapshot

Animals in a bacterial world, a new imperative for the life sciences

inferred← citeshttps://doi.org/10.1073/pnas.1605015113openalex-snapshot

Bacterial lipids activate, synergize, and inhibit a developmental switch in choanoflagellates

inferred← citeshttps://doi.org/10.1073/pnas.1702511114openalex-snapshot

Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model

inferred← citeshttps://doi.org/10.1073/pnas.2010945117openalex-snapshot

Bacteria- and temperature-regulated peptides modulate β-catenin signaling in Hydra

inferred← citeshttps://doi.org/10.1080/10937404.2017.1326071openalex-snapshot

Impact of mycotoxins on the intestine: are mucus and microbiota new targets?

inferred← citeshttps://doi.org/10.1080/15548627.2019.1586247openalex-snapshot

The epg5 knockout zebrafish line: a model to study Vici syndrome

inferred← citeshttps://doi.org/10.1080/19490976.2020.1824563openalex-snapshot

Conserved anti-inflammatory effects and sensing of butyrate in zebrafish

inferred← citeshttps://doi.org/10.1080/19490976.2023.2183686openalex-snapshot

Secreted Aeromonas GlcNAc binding protein GbpA stimulates epithelial cell proliferation in the zebrafish intestine

inferred← citeshttps://doi.org/10.1086/bblv223n1p7openalex-snapshot

Investigating Bacterial-Animal Symbioses with Light Sheet Microscopy

inferred← citeshttps://doi.org/10.1089/zeb.2014.0972openalex-snapshot

Use of Gnotobiotic Zebrafish to Study Vibrio anguillarum Pathogenicity

inferred← citeshttps://doi.org/10.1093/femsre/fuag031openalex-snapshot

Caenorhabditis elegans as an experimental model for resilience-boosting microbiota interventions in nonmodel ectotherms

inferred← citeshttps://doi.org/10.1093/genetics/iyac133openalex-snapshot

Conserved roles for Hnf4 family transcription factors in zebrafish development and intestinal function

inferred← citeshttps://doi.org/10.1093/iob/obac026openalex-snapshot

Intestinal Microbiome Richness of Coral Reef Damselfishes (Actinopterygii: Pomacentridae)

inferred← citeshttps://doi.org/10.1093/jn/nxy084openalex-snapshot

The Hepatotoxicity of Palmitic Acid in Zebrafish Involves the Intestinal Microbiota

inferred← citeshttps://doi.org/10.1093/molbev/msad138openalex-snapshot

Body-Plan Reorganization in a Sponge Correlates with Microbiome Change

inferred← citeshttps://doi.org/10.1096/fj.12-216861openalex-snapshot

Primocolonization is associated with colonic epithelial maturation during conventionalization

inferred← citeshttps://doi.org/10.1097/01.mib.0000442923.85569.68openalex-snapshot

Could a Swimming Creature Inform Us on Intestinal Diseases? Lessons from Zebrafish

inferred← citeshttps://doi.org/10.1101/2019.12.11.871855openalex-snapshot

Early sexual dimorphism in the developing gut microbiome of northern elephant seals

inferred← citeshttps://doi.org/10.1101/2021.07.06.451297openalex-snapshot

Gut-derived metabolites influence neurodevelopmental gene expression and Wnt signalling events in a germ-free zebrafish model

inferred← citeshttps://doi.org/10.1101/2022.03.28.486083openalex-snapshot

GLOBAL HOST RESPONSES TO THE MICROBIOTA AT SINGLE CELL RESOLUTION IN GNOTOBIOTIC ZEBRAFISH

inferred← citeshttps://doi.org/10.1101/2023.04.14.536919openalex-snapshot

SINGLE CELL RESOLUTION OF THE ADULT ZEBRAFISH INTESTINE UNDER CONVENTIONAL CONDITIONS, AND IN RESPONSE TO AN ACUTE VIBRIO CHOLERAE INFECTION

inferred← citeshttps://doi.org/10.1101/2023.06.29.547108openalex-snapshot

Vibrio cholerae Arrests Intestinal Epithelial Proliferation through T6SS-dependent Activation of the Bone Morphogenetic Protein Pathway

inferred← citeshttps://doi.org/10.1101/399410openalex-snapshot

Epigenetic factors coordinate intestinal development

inferred← citeshttps://doi.org/10.1101/493536openalex-snapshot

Dissection of intestines from larval zebrafish for molecular analysis

inferred← citeshttps://doi.org/10.1101/721662openalex-snapshot

Immune Regulation of Intestinal Stem Cell Proliferation and Differentiation in Drosophila

inferred← citeshttps://doi.org/10.1101/799981openalex-snapshot

Differential effects of commensal bacteria on progenitor cell adhesion, division symmetry and tumorigenesis in the Drosophila intestine

inferred← citeshttps://doi.org/10.1101/gad.212522.112openalex-snapshot

Exploring host–microbiota interactions in animal models and humans

inferred← citeshttps://doi.org/10.1111/1758-2229.12774openalex-snapshot

Environmental conditions and neutral processes shape the skin microbiome of European catfish ( Silurus glanis ) populations of Southwestern France

inferred← citeshttps://doi.org/10.1111/anu.13161openalex-snapshot

Dietary daidzein improves the development of intestine subjected to soybean meal in juvenile turbot ( Scophthalmus maximus L.)

inferred← citeshttps://doi.org/10.1111/are.14778openalex-snapshot

Alternate weekly exchanges of feeding regime affect the diversity of intestinal microbiota and immune status of Nile tilapia Oreochromis niloticus

inferred← citeshttps://doi.org/10.1111/cmi.12236openalex-snapshot

Real-time imaging and genetic dissection of host-microbe interactions in zebrafish

inferred← citeshttps://doi.org/10.1111/cmi.13152openalex-snapshot

The zebrafish as a model for gastrointestinal tract–microbe interactions

inferred← citeshttps://doi.org/10.1111/febs.15910openalex-snapshot

Microbial recognition regulates intestinal epithelial growth in homeostasis and disease

inferred← citeshttps://doi.org/10.1111/jfd.12743openalex-snapshot

Transmission of a common intestinal neoplasm in zebrafish by cohabitation

inferred← citeshttps://doi.org/10.1111/jwas.12724openalex-snapshot

Potential of indigenous Bacillus spp. as probiotic feed supplements in an extruded low‐fish‐meal diet for juvenile olive flounder, Paralichthys olivaceus

inferred← citeshttps://doi.org/10.1111/mec.12846openalex-snapshot

Major H istocompatibility C omplex class II b polymorphism influences gut microbiota composition and diversity

inferred← citeshttps://doi.org/10.1111/mec.15385openalex-snapshot

Early sexual dimorphism in the developing gut microbiome of northern elephant seals

inferred← citeshttps://doi.org/10.1111/mec.15699openalex-snapshot

Diversity of gut microbiomes in marine fishes is shaped by host‐related factors

inferred← citeshttps://doi.org/10.1111/raq.12191openalex-snapshot

Progress in fish gastrointestinal microbiota research

inferred← citeshttps://doi.org/10.1111/raq.12248openalex-snapshot

The adherence and colonization of microorganisms in fish gastrointestinal tract

inferred← citeshttps://doi.org/10.1111/raq.12513openalex-snapshot

Microbiome diversity and dysbiosis in aquaculture

inferred← citeshttps://doi.org/10.1111/raq.12570openalex-snapshot

Commensal bacteria‐immunity crosstalk shapes mucosal homeostasis in teleost fish

inferred← citeshttps://doi.org/10.1111/raq.12644openalex-snapshot

Highly diluted bioactive compounds in marine aquaculture: A potential alternative for sustainable production

inferred← citeshttps://doi.org/10.1128/aem.01547-18openalex-snapshot

Environmental Sources of Bacteria and Genetic Variation in Behavior Influence Host-Associated Microbiota

inferred← citeshttps://doi.org/10.1128/iai.00653-12openalex-snapshot

Association with Soil Bacteria Enhances p38-Dependent Infection Resistance in Caenorhabditis elegans

inferred← citeshttps://doi.org/10.1128/jb.00868-16openalex-snapshot

Teleosts as Model Organisms To Understand Host-Microbe Interactions

inferred← citeshttps://doi.org/10.1128/mbio.00692-13openalex-snapshot

The Gut Microbiome Modulates Colon Tumorigenesis

inferred← citeshttps://doi.org/10.1128/mbio.01751-14openalex-snapshot

Spatial and Temporal Features of the Growth of a Bacterial Species Colonizing the Zebrafish Gut

inferred← citeshttps://doi.org/10.1128/mbio.02136-14openalex-snapshot

Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using Aeromonas as a Test Case

inferred← citeshttps://doi.org/10.1128/msystems.00353-26openalex-snapshot

Long-term culture of germ-free zebrafish using gamma-irradiated feeds

inferred← citeshttps://doi.org/10.1128/spectrum.01989-24openalex-snapshot

Spatial and temporal changes in gut microbiota composition of farmed Asian seabass ( Lates calcarifer ) in different aquaculture settings

inferred← citeshttps://doi.org/10.1128/spectrum.03157-22openalex-snapshot

The Role of Histo-Blood Group Antigens and Microbiota in Human Norovirus Replication in Zebrafish Larvae

inferred← citeshttps://doi.org/10.1134/s1062359015050039openalex-snapshot

Study of the microbiome of the intestine of the Comephorus dybowski korotneff, 1904

inferred← citeshttps://doi.org/10.1142/s0192415x25500624openalex-snapshot

Application of Traditional Chinese Medicine in Alzheimer’s Disease Treatment: A Focus on the Wnt/β-Catenin Pathway

inferred← citeshttps://doi.org/10.1146/annurev-animal-062920-113114openalex-snapshot

Bacteriome Structure, Function, and Probiotics in Fish Larviculture: The Good, the Bad, and the Gaps

inferred← citeshttps://doi.org/10.1146/annurev-genom-090711-163747openalex-snapshot

Evolution of the Immune System in the Lower Vertebrates

inferred← citeshttps://doi.org/10.1152/ajpgi.00119.2020openalex-snapshot

Broad-spectrum antibiotics alter the microbiome, increase intestinalfxr, and decrease hepatic steatosis in zebrafish short bowel syndrome

inferred← citeshttps://doi.org/10.1152/ajpgi.00343.2018openalex-snapshot

Wnt signaling inhibition by monensin results in a period of Hippo pathway activation during intestinal adaptation in zebrafish

inferred← citeshttps://doi.org/10.1155/2024/5511461openalex-snapshot

Microbiomes of Tilapia Culture Systems: Composition, Affecting Factors, and Future Perspectives

inferred← citeshttps://doi.org/10.11606/t.95.2017.tde-06122017-114559openalex-snapshot

O papel de transferência horizontal de genes na história evolutiva de duas classes de genes em bactérias

inferred← citeshttps://doi.org/10.1186/2049-2618-2-20openalex-snapshot

Structure of the gut microbiome following colonization with human feces determines colonic tumor burden

inferred← citeshttps://doi.org/10.1186/s10020-022-00579-1openalex-snapshot

Zebrafish: an efficient vertebrate model for understanding role of gut microbiota

inferred← citeshttps://doi.org/10.1186/s12864-022-08447-2openalex-snapshot

Starvation causes changes in the intestinal transcriptome and microbiome that are reversed upon refeeding

inferred← citeshttps://doi.org/10.1186/s40104-015-0046-8openalex-snapshot

Effects of different forms of yeast Saccharomyces cerevisiae on growth performance, intestinal development, and systemic immunity in early-weaned piglets

inferred← citeshttps://doi.org/10.1186/s40168-022-01302-2openalex-snapshot

Gut-derived metabolites influence neurodevelopmental gene expression and Wnt signaling events in a germ-free zebrafish model

inferred← citeshttps://doi.org/10.1186/s44315-025-00026-wopenalex-snapshot

Engineering the fish gut microbiome: could it serve as future-proof strategy for sustainable aquaculture?

inferred← citeshttps://doi.org/10.1201/b16442-4openalex-snapshot

Presentation of Microbial Signals via Maternal Cells: An Evolutionary Advantage of Mammals

inferred← citeshttps://doi.org/10.1242/dev.155317openalex-snapshot

Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling

inferred← citeshttps://doi.org/10.1242/dev.161497openalex-snapshot

nkxgenes establish SHF cardiomyocyte progenitors at the arterial pole and pattern the venous pole through Isl1 repression

inferred← citeshttps://doi.org/10.1242/dev.186106openalex-snapshot

Differential effects of commensal bacteria on progenitor cell adhesion, division symmetry and tumorigenesis in the Drosophila intestine

inferred← citeshttps://doi.org/10.1242/dev.194936openalex-snapshot

Microbial influences on gut development and gut-brain communication

inferred← citeshttps://doi.org/10.1242/dev.200797openalex-snapshot

Symbiosis: the other cells in development

inferred← citeshttps://doi.org/10.1242/dmm.010843openalex-snapshot

Functional analysis of a zebrafishmyd88mutant identifies key transcriptional components of the innate immune system

inferred← citeshttps://doi.org/10.1242/dmm.011163openalex-snapshot

H. pylorivirulence factor CagA increases intestinal cell proliferation by Wnt pathway activation in a transgenic zebrafish model

inferred← citeshttps://doi.org/10.1242/dmm.023309openalex-snapshot

Graded effects of unregulated smooth muscle myosin on intestinal architecture, intestinal motility and vascular function in zebrafish

inferred← citeshttps://doi.org/10.1242/dmm.026633openalex-snapshot

Ptf1a+,ela3l− cells are developmentally maintained progenitors for exocrine regeneration following extreme loss of acinar cells in zebrafish larvae

inferred← citeshttps://doi.org/10.1371/journal.pbio.1001386openalex-snapshot

Smooth Muscle Tension Induces Invasive Remodeling of the Zebrafish Intestine

inferred← citeshttps://doi.org/10.1371/journal.pbio.2000689openalex-snapshot

The enteric nervous system promotes intestinal health by constraining microbiota composition

inferred← citeshttps://doi.org/10.1371/journal.pbio.2002054openalex-snapshot

Genomic dissection of conserved transcriptional regulation in intestinal epithelial cells

inferred← citeshttps://doi.org/10.1371/journal.pbio.2006893openalex-snapshot

Experimental bacterial adaptation to the zebrafish gut reveals a primary role for immigration

inferred← citeshttps://doi.org/10.1371/journal.pbio.3003766openalex-snapshot

Estrogen impacts NOD2-dependent regulation of intestinal homeostasis

inferred← citeshttps://doi.org/10.1371/journal.pgen.1001357openalex-snapshot

Roles of brca2 (fancd1) in Oocyte Nuclear Architecture, Gametogenesis, Gonad Tumors, and Genome Stability in Zebrafish

inferred← citeshttps://doi.org/10.1371/journal.pone.0092856openalex-snapshot

Divergent Chemosymbiosis-Related Characters in Thyasira cf. gouldi (Bivalvia: Thyasiridae)

inferred← citeshttps://doi.org/10.1371/journal.pone.0095027openalex-snapshot

The Gut Microbial Community of Midas Cichlid Fish in Repeatedly Evolved Limnetic-Benthic Species Pairs

inferred← citeshttps://doi.org/10.1371/journal.pone.0304686openalex-snapshot

The impact of microplastics polystyrene on the microscopic structure of mouse intestine, tight junction genes and gut microbiota

inferred← citeshttps://doi.org/10.1371/journal.ppat.1006631openalex-snapshot

The bacterial virulence factor CagA induces microbial dysbiosis that contributes to excessive epithelial cell proliferation in the Drosophila gut

inferred← citeshttps://doi.org/10.15760/etd.3441openalex-snapshot

Intestinal Microbiota Diversity of Pre-Smolt Steelhead (Oncorhynchus mykiss) Across Six Oregon and Washington Hatcheries

inferred← citeshttps://doi.org/10.15760/etd.5593openalex-snapshot

Intestinal Microbiota Diversity of Pre-Smolt Steelhead (Oncorhynchus mykiss) Across Six Oregon and Washington Hatcheries

inferred← citeshttps://doi.org/10.1590/1809-6891v24e-74134eopenalex-snapshot

Good practices in the rearing and maintenance of zebrafish (Danio rerio) in Brazilian laboratories

inferred← citeshttps://doi.org/10.1590/1809-6891v24e-74134popenalex-snapshot

Boas práticas na criação e manutenção de zebrafish (Danio rerio) em laboratório no Brasil

showing the first 200 of 254 · page through all 254

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.